Syngnathoides biaculeatus (alligator pipefish): 133500959
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Entry
133500959 CDS
T09681
Symbol
lingo4b
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 4b
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sbia04131
]
133500959 (lingo4b)
Membrane trafficking [BR:
sbia04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
133500959 (lingo4b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
LRR_LRWD1
ig
Ig_2
LRR_9
LRR_Zer-1
V-set
LRRNT
LRR_EndoS
Ig_VEGFR-1-like_5th
C2-set_2
Ig_5
LRR_NXF1-5
Motif
Other DBs
NCBI-GeneID:
133500959
NCBI-ProteinID:
XP_061676254
LinkDB
All DBs
Position
5:complement(10734290..10743691)
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AA seq
603 aa
AA seq
DB search
MFVESVVRWAAWGILLQAGTPVSAGSCPPRCSCRPDAKEVICSGKHLNSIPEGFSSDASR
VDLSYNRIRTVGRRQFSGLHELRDLDLSENLISMIEVEAFQGLQNLRTLRIKNNRLKILP
VGVFSGLSGLRFLDLSQNEILVFLDYTFRETVNLRTLDADENDLVFISQRAFFGLQSLQE
LHIDRSNLTSIPTEALSQLQSLTYLRMVRLTISTLPNNAFRRLHGLRTLILANWPSLDKV
ASNSLIGLNLTALVISSCNLSAVPYSALRHLVYLRFLDLSYNSITVVQGNLLRELLRLQE
LHLAGANLLRIESGAFKGLASLRILNLTSNQLSTLEESTLHSVGNLQVLRLDGNPLSCDC
RLLWVVRRRLRLNFDGHQPTCSSPDTVKQREFRDFSEKELPRLFTCRSARILDRRPQEVR
VEEGTTVHFSCKADGDPAPFITWISSHKNVVSPVGRIRVLPNGTLEVRFAQVHDSGTYQC
LASNAAGNDSIRVGLYVKGGQRNRTVPFFTEEDWVEPLIPQATNSSAQQAKPYPFDAKTL
IIATTMGFLSFLSSVAICFIFMFFWSQSKGQIKHTATIDFVPRSSMGGGGDGGDGGRFTM
KLI
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atgtttgtggagtctgtggttcgatgggcggcatggggcatcctgcttcaggcgggaacg
cccgtctctgcgggaagttgccctcctcgttgttcgtgtcggcctgatgcgaaggaagtc
atctgctcgggcaaacatttgaactcaatccccgagggcttttccagcgatgcaagccgt
gtggatttatcatacaacaggattcggacagtggggcgtcgacagttttctggcctccac
gaactccgagatctggatctcagtgagaatttgatctctatgatcgaggtcgaagctttt
cagggactacaaaatctcaggacgcttcgaattaaaaacaatcgactcaagatcctcccc
gttggggttttctctggcctgtctggtctccgttttctggatctgagccagaatgagatt
ctggtcttcctggactacaccttcagagagacagtgaacctacggacgcttgacgccgac
gagaatgacttggtgttcatctctcagcgagcattctttggtttgcagagcttgcaagag
ctccatatcgaccgcagcaatttgacatccattccgactgaggcgctgtctcagctccag
agcctcacgtaccttcgcatggtccgcctcactatttccacgctgcctaacaacgctttc
cgccgcttgcatggactacgcaccctcatcctggcaaactggccctcccttgacaaggtc
gccagcaacagcctaattggactcaacctgaccgctctggtcatcagcagctgcaatctc
agtgcggtgccatattcggctctgcgtcaccttgtctaccttcgcttcctggacctgtcc
tataactccatcactgttgttcaaggtaatctgttgcgggaattacttagactccaagag
ttacacctagctggggccaacctgctgcgaatagagtctggggccttcaagggccttgcc
tctctccgcatactcaacttgacatccaaccagctatcaactttggaggagagcacctta
cactcagtggggaatctccaggtgctgagactggacgggaatcccctgtcctgcgactgc
cgcctgctctgggtggtccgtcggcgattacgcctcaactttgacggacatcagccaacg
tgctcgtcccccgacacagtaaagcagcgcgaattcagagacttttctgaaaaggaactg
ccaaggctgttcacctgccggtctgctcggatcctggaccgaaggccgcaggaggtcagg
gtggaggagggcaccaccgttcacttctcctgcaaggctgatggggatcctgctccgttc
atcacttggatctcatctcacaagaatgtggtttctccggtgggaagaatcagagtttta
cccaacggtacgctggaggtacggtttgcgcaggttcacgacagcggcacctatcagtgc
ctcgcgagcaacgctgccggcaatgacagcattagggtcggcctttatgtgaaggggggc
cagcgcaacagaaccgtccccttcttcacagaggaggactgggtggagcccctgattccc
caagccaccaactcctcagcccaacaggcaaagccctacccctttgacgccaagacgctg
atcatcgccaccaccatgggcttcctgtccttcctcagctcggtagccatctgcttcatc
ttcatgttcttttggagccaaagcaaaggccagatcaagcacactgccaccatcgacttt
gttcctcgctcctccatgggcggcggaggggacggcggggacggagggaggttcactatg
aaactcatttaa
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