Syngnathoides biaculeatus (alligator pipefish): 133501042
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Entry
133501042 CDS
T09681
Symbol
wdtc1
Name
(RefSeq) WD and tetratricopeptide repeats protein 1
KO
K11807
WD and tetratricopeptide repeats protein 1
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sbia04121
]
133501042 (wdtc1)
Ubiquitin system [BR:
sbia04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
133501042 (wdtc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
EIF3I
WDR55
Beta-prop_EML
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_WDR75_1st
WD40_RFWD3
Beta-prop_TEP1_C
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT122_1st
TPR_19
NBCH_WD40
Beta-prop_WDR35_TULP_N
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_SPT8
TPR_17
TPR_11
ANAPC3
Beta-prop_WDR19_1st
TPR_1
WD40_MABP1-WDR62_1st
Barstar
Motif
Other DBs
NCBI-GeneID:
133501042
NCBI-ProteinID:
XP_061676434
LinkDB
All DBs
Position
5:complement(5856839..5869531)
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AA seq
666 aa
AA seq
DB search
MTNVNITRDILHRQIQDKTVSGFQRFYHVTEPFIKKLGLEAELQGHTGCVNCLEWNEHGD
LLASGSDDQHAIIWDPFRLKKVTTMHTGHAANIFSVKFLPHSGDRILVTGAADTKVHVHD
LIAKETIHMFSDHTNRVKRIATAPMWPNTFWSAAEDGLIRQYDLRESSKHSEVLIDLTKF
CGQMVEAKCLAVNPRDNNYMAVGANGPFVRLYDIRMIHNCRKSISRFKPSAVRTFLENQI
PIPEKAVQYYVAGHLPRKLRDYNNRLRVLVVTYVTFSPDGTELLVNMGGEQVYLFDLTCK
QTPYTLLVPQTWQSSPDLEDGKTTNDVSNGIHLPDSHIRFTQSKMQPNAADLPPHLEKIK
QQANDEFAQQHWTQAIQLYSSGIYHSSSNAVFYGNRAAAYMKRKWDGDDYDALKDCLKAL
TLNPEHLKAHFRLARCLFELKYVSEAQDCLSDFKGKFPEQAQSSACSALDKDIKAFLKTQ
TEDDMAPSYIRNSLSWNEPILKDELCFRVQSLDYKHRYCGHCNTTTDIKEANFFGSKGQY
IVSGSDDGSFFIWEKETTNLVGIMQGDKSIVNCLQPHPSYCFLASSGIDPVVRLWSPRPE
TERENSRRVVEDMEGAAQANQQRMNTDPLEVMLHNMGYPISGLRAAGPDGSDDEDSSDGQ
VQCRPS
NT seq
2001 nt
NT seq
+upstream
nt +downstream
nt
atgactaatgtcaacatcaccagagatatcctgcacaggcaaatccaggacaagacggtg
tcaggctttcaaaggttctatcatgtgactgaacccttcatcaagaaacttgggctggaa
gctgagcttcagggccacactggctgcgtgaactgtttggaatggaatgaacatggagat
ctgctggcctcggggtcggatgatcaacatgctatcatctgggatccattcagactcaag
aaggttactactatgcacacggggcatgcagcaaacatattctctgtgaagttcctccct
cactccggagatcgaattttggtgaccggcgccgcggacaccaaggtccacgtgcatgac
ctgatcgccaaagaaaccatccatatgttttctgatcataccaacagggtaaaacgcatt
gccacagcgccaatgtggcccaacaccttctggagtgccgcggaggacggcctcatcagg
caatatgacttgcgggagagcagtaaacactcagaggtgctgattgacctgacaaagttc
tgcggtcagatggtggaagccaagtgtttggccgtcaacccgcgggacaacaattacatg
gccgtcggggccaacggtccctttgtgcgtctttatgacatccgaatgattcacaactgt
aggaaatcaataagccgcttcaagccatctgctgtgcgcacgttcttggaaaatcagatt
cccatcccagaaaaagctgtgcagtattacgttgcaggtcacctgccaagaaaactgcga
gactacaataaccgcctgagggtcttggtggtcacttatgtcactttcagtccagatggg
acggagttacttgtcaatatgggtggggaacaggtgtatctgtttgacctgacatgtaag
caaacgccatacactttgctggttccacaaacatggcagtcatcaccagatttggaggat
gggaagacgaccaatgacgtctccaatggaattcatttgccagacagccatattcgattt
acccaaagcaagatgcaaccgaacgccgctgatcttcctccacatttggaaaagatcaaa
cagcaagcgaacgatgagtttgcccagcagcattggacgcaggccatccagctgtacagt
tcgggaatttatcattccagcagcaacgccgtgttttacggaaaccgggccgcggcctac
atgaagcggaaatgggacggagatgactacgacgcactcaaggactgtctaaaggcactg
acgctaaacccggaacacctaaaggctcattttaggcttgcccggtgtctctttgagctc
aaatacgtgtctgaagcgcaggattgcctcagtgatttcaaagggaagtttccggagcag
gcgcaaagcagtgcgtgtagcgcattggataaagatatcaaggccttcttgaagacacaa
acggaagacgatatggcgcccagctatatccggaattccctgagctggaacgagcccatt
cttaaggatgagttgtgttttcgagtgcaaagcttggactacaagcacagatactgcgga
cactgcaacaccaccacagatattaaagaagccaacttctttggaagcaaaggccagtac
atcgtcagcgggtcagacgacggctcgttctttatatgggaaaaggagacgacaaattta
gtgggcatcatgcagggggacaagtccatagtcaactgcttgcagcctcaccccagctac
tgcttcctggcctcgagtggtattgacccggtggttcgattatggagccccagaccagag
acggagagagaaaacagcagacgcgtggtggaagacatggaaggcgccgcgcaggccaac
cagcagcgaatgaacacggacccgctggaggttatgctgcacaatatgggctatcccatc
tcagggttgcgcgccgcgggcccagacggctccgatgacgaggacagctcggacggtcaa
gtgcaatgcaggccgagctaa
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