Syngnathoides biaculeatus (alligator pipefish): 133501093
Help
Entry
133501093 CDS
T09681
Symbol
syngap1b
Name
(RefSeq) LOW QUALITY PROTEIN: synaptic Ras GTPase activating protein 1b
KO
K17631
Ras/Rap GTPase-activating protein SynGAP
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DAB2P_C
PH_RASGAP
RasGAP
C2
PH
PH_2
Motif
Other DBs
NCBI-GeneID:
133501093
NCBI-ProteinID:
XP_061676523
LinkDB
All DBs
Position
5:900071..977137
Genome browser
AA seq
1488 aa
AA seq
DB search
MSYVPIQDARCAAPPSYHQHQHHHLLHHHQRSQQVPAFHAAPPAYPYARTSFEQPSDERP
APPPDRWKARLRVSPGKPSHMLDQEEVHPLLMRERRSESHRNKLLRRTVSVPVEGRHHPE
MDHRPRRKSIATGKQPSMDVPPTAPLQPFRQSVSNPPACSFSLPRARPPPLAPAASGPQA
APAGLRGGRRRPPPLLPRSPPLSPRLSLPLPRSALPPPFSYWGGDRRAGARSPAAGGSLI
AALPPVESFLSRRLKGSIKRAKSQPKLDRSSSFRHMILPRFRSADQDRTRLMQSFKESHS
HESLLSPSSAAEALDLTLDEDAVIKPVHSSILGQEYCFEVTTASGTKCFACRSAAERDKW
IENLQRAVKPNKDNSRRVDNVLKLWIIEARELPAKKRYYCELCLDDMLYARTTSKPRTDT
VFWGEHFEFNNLPAVRNLRLHLYKETDKKRRKEKSTYLGLVSIPISSITGRQFVEQWYPV
IQPSVLTKGTGVVGGGKIINASLRLKSRFQTMNILPMELYKEFAEYITNNYRTLCVVLEP
VLSVKSKEEVACALVHILQSTGKAKDFLSDMAMCEVDRFIDREHLIFRENTLATKAIEEY
LKLIGHKYLKDAIGEFIRALYESEENCEVDPMRTPPSVLPDHQANLRMCCELALCKIVTS
HCVFPRELKEVFASWRVRCAERGREDIADRLISGSLFLRFLCPAIMSPSLFNLTQEYPDE
QTSRTLTLIAKVVQNLANFSKFGNKEEYMCFMNEFVEMEWGSMQQFLYEISNVDSVSNAG
AFEGYIDLGRELSVLHSLLWEVMAQLSKDAIIKLGPLPRLLNDISMALRNPHLQRQPSQQ
ADRLLSRPSFNRGISSDFQNLLMRDLNSSMDITRLPSPTSTGGVMPSRSQLSFQERERLL
HRAPSKDVFYVSRPPLARSSPAYCTSSSDITEPDGKDSRMNSVSNLQSVDMLNSSQASIA
GMGSFGGLSGGGLGSGLGGQPRAGGRLSAGSVASGGLRPSRMSAAAAADSLSQQQQQQAA
AMRYPLSFQNPLFHLATADGPRHPQRGRAQPPAPLLLAPEPEPSHPSYVPQFAHGGFSRS
EDLSTLRTRDGHLGQPSIIHSHSYSDDYGRADYARRQMSAHVQDNIQQQQMMGLTSQTGT
SHSSLATTPPSTVQPRGPPPPAQRVKSQTSHQLSVSAAAPVKLRPQSGNLLQSPESAYGA
GRQQHGGGGRQLTVKDNAAPGLPRQQSSVRESGSPQGTGSPAAQTSPQQQQPQAQPQPQP
QPQQQQQHLLKPNVGKQAPSSLNPGTPANERTVAWVSNMPHLSADIESSRIDREDFKLKE
YSKSMDESRMDRVREYEEEINCLKERLVMSHKKLEEYERRLLTQEQQTNKILLQYQNRLE
DSERRLRQQQLEKDSQIKGIINRLMAVEDEIRGGHVIEPKAARIFPDQGRRQSILVQPRL
APVPPRVSSHSQSFMEDSAEANWLMRHQRHAAGWHGQMSRALSRDAIG
NT seq
4467 nt
NT seq
+upstream
nt +downstream
nt
atgtcctatgttcccatccaagatgcaaggtgtgccgcccccccctcctaccaccagcat
cagcaccatcacctccttcaccaccaccagcggtcccagcaggtcccggccttccacgcc
gcccccccggcgtacccctacgcccgcacttccttcgagcagccgtccgacgagcgcccg
gcgccgccgcccgaccgctggaaagcccgtctgcgcgtgagccccggaaagccctcacac
atgttggaccaggaagaggtgcacccccttctgatgcgcgagcggcgctccgagtcgcac
aggaacaagttgctgcgccgcacggtcagcgttcctgttgagggccgacatcatcccgag
atggatcaccgacctcggcggaagagcatcgccacggggaagcagcccagcatggacgtc
ccccccaccgccccccttcaacccttccgacagtccgtgagtaacccccccgcctgctcc
ttctcgctgccccgcgcccgcccgcccccgctcgcccccgccgcgtcgggccctcaggct
gcgccggcggggctgcgaggtggccggcggcggcccccccccctgctgccccgctcgccg
cccctctcccctcgcctgtcgctccccctgccccgctcggccctccccccccccttctcg
tactggggcggagaccggagggccggcgctcggagtcccgcggcgggaggaagcttaatc
gcagcgctgcccccggtggagagtttcctgagcaggaggttgaagggttccatcaagagg
gccaagagtcagcccaagctggaccgcagcagcagcttccgccacatgatcctgcctcgc
ttccgaagcgccgaccaggacaggacgcgtttgatgcaaagcttcaaggagtcgcactcg
cacgagtcgctgctgtcgcccagcagcgcggccgaggcgctggacctgacgctggacgag
gacgccgtcatcaagccggtgcactccagcatcctgggccaggagtactgcttcgaggtg
accacggcgtcgggaaccaagtgcttcgcgtgtcgctcggcggccgagagagacaaatgg
atcgagaacctgcagagggccgtcaagcccaacaaggacaacagtcggcgcgtggacaac
gtgctgaagctgtggatcatcgaggcccgcgagctgcccgccaagaagcgctactactgc
gagctgtgtctggacgacatgctgtacgcccgtaccaccagcaagccgcgaactgacacc
gtcttctggggggagcactttgagttcaacaacctgcccgccgtgcgaaacctacgcttg
cacctctataaggagacggacaagaagagacgcaaggaaaagagcacctatttaggatta
gtgagcatccccatctccagcatcaccgggcgccagtttgtggagcagtggtaccccgtc
atccagcccagcgttctcaccaaggggacgggcgtggtcggcggcggcaagatcatcaac
gcctccctgcgcctcaagtcccgcttccagaccatgaacatcttgcccatggagctttat
aaagagttcgccgagtacatcaccaacaactaccgaacgctctgcgtcgtcctggagccc
gtcctcagcgtcaagagcaaagaggaggtggcctgcgcactggtgcacatcctgcagagc
accggaaaagccaaggacttcctgtcagacatggccatgtgcgaggtggaccgattcatt
gaccgggagcaccttatcttcagagagaacactctggccaccaaagccatcgaagagtac
ctcaagctcatcggacacaagtacctcaaggatgccatcggggagttcatacgggccttg
tacgagtcggaggaaaactgcgaggtggaccccatgcgaacgcctccgtccgtgctgccc
gaccatcaggccaacctgagaatgtgctgcgagttggccctctgcaagatcgtcacttcc
cattgcgttttcccgcgggagctgaaggaggtgttcgcctcgtggcgagtgcgctgcgcc
gagcgcgggcgcgaggacatcgccgaccggctgatcagcggctcgctcttcctgcgcttc
ctctgtcccgccatcatgtcgccgtcgctcttcaacctgactcaagagtaccccgacgag
cagacgtcgcgcacgctcacgctcatcgccaaagtggtgcagaacctggccaacttctcc
aagttcggcaacaaggaggagtacatgtgcttcatgaacgagtttgtggagatggagtgg
ggctccatgcaacagttcctctacgagatctccaacgtggacagcgtcagcaacgccggc
gccttcgagggctacatcgacctgggccgggagctgtccgtgctccacagtctcctctgg
gaggtcatggcccagctcagcaaggacgccatcatcaagctgggccccctcccgcggctg
ctgaacgacatcagcatggccctgcgcaacccgcacctgcagcggcagcccagccagcag
gcggatcggctcctgtcccggccctccttcaaccggggcatctcgtccgacttccagaac
ctcctgatgagggacctcaacagctcaatggacatcacccgcctgccttcccccacctcc
accggcggggtgatgccgtcccgctcccagttgagctttcaggagcgcgagcgcctcctc
caccgagccccgtccaaagatgtgttctacgtgtcccgcccccccctggctcgctccagc
ccggcctactgcaccagcagctccgacatcaccgaacccgacggcaaggattcccgaatg
aacagcgtgtctaacctgcagtcggtggacatgctcaactcctcccaggcctccatcgcc
ggcatgggcagcttcggggggctgagcggtggcggcctgggttcggggctcggcggccag
ccgcgggccggcggcaggctgtcggccggctccgtcgcgtccggcggcctgcggccgagc
cggatgagcgccgccgccgccgccgactcgctgtcccagcagcagcaacagcaggccgcc
gccatgcgctacccgctttccttccagaatcccctctttcacctggcgacggcggacggg
ccgcggcacccgcagcgcgggcgcgctcagccccccgcgcccctcctcctggcccccgag
ccggagccctcgcaccccagctacgtgccgcagttcgcccacgggggcttctcccgcagc
gaggacctgtccaccctcaggacccgcgacggccacctgggccagcccagcatcatccac
tcgcacagctacagcgacgactacggcagggccgactacgcccgccgccagatgtccgcc
cacgtgcaggacaacattcagcagcagcagatgatgggcctgacctcccagacgggcacc
tcccactcgtccttggccaccacgcccccctccacggtccaaccccgaggaccgccgcct
cccgcccagcgcgtcaaatctcagacgtcgcaccagctgtcggtcagcgccgccgccccg
gtcaagttgcggccccagagcggaaacctcctccagtcgcccgagtcggcctacggggcc
gggaggcagcagcacggcgggggcggccgccagctgaccgtcaaggacaacgcggcgccg
gggctgcctcgccagcagagctcggtccgggagtcggggagcccgcagggcaccggcagc
cccgccgcccagacgtcgccccaacagcagcagccgcaggcgcagccgcagccgcagccg
cagccgcagcagcagcagcagcacctcctcaagccaaacgtcggcaagcaggcgccttcg
agcctcaacccggggacgccggccaacgagcggacggtggcctgggtgtccaacatgccg
cacctgtcggccgacatcgagagctcgaggatcgaccgcgaggacttcaagctcaaggag
tactccaagagcatggacgagtcgcgcatggacagggtgcgcgagtacgaggaggagatc
aactgcctgaaggagcgtctggtcatgtcgcacaagaagctggaggagtacgagcgccgc
ctgctgacgcaggagcagcagaccaacaagatcctgctccagtaccagaaccggctggag
gacagcgagcgtcgcctgcgccagcagcagctggagaaggactcgcagatcaaaggcatc
atcaacagactcatggccgtggaggatgagatacggggaggacacgtcattgagccaaaa
gcagccaggattttcccagatcaggggaggcgtcagtccatcctagtgcagcctcgtctc
gcccccgtcccaccccgagtgtccagccactcgcaaagcttcatggaggacagtgcggaa
gctaactggctgatgcgccatcagcgccacgcggcgggctggcacggccaaatgtctcgc
gcgctctcccgcgacgctattggctga
DBGET
integrated database retrieval system
