Syngnathoides biaculeatus (alligator pipefish): 133501123
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Entry
133501123 CDS
T09681
Symbol
nbn
Name
(RefSeq) nibrin
KO
K10867
nibrin
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Pathway
sbia03440
Homologous recombination
sbia04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
133501123 (nbn)
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
133501123 (nbn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sbia03032
]
133501123 (nbn)
03400 DNA repair and recombination proteins [BR:
sbia03400
]
133501123 (nbn)
DNA replication proteins [BR:
sbia03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
133501123 (nbn)
DNA repair and recombination proteins [BR:
sbia03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
133501123 (nbn)
BRCA1-C complex
133501123 (nbn)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Nbs1_C
NIBRIN_BRCT_II
FHA
Yop-YscD_cpl
BRCT
RTT107_BRCT_5
PTCB-BRCT
Motif
Other DBs
NCBI-GeneID:
133501123
NCBI-ProteinID:
XP_061676589
LinkDB
All DBs
Position
5:26476577..26499767
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AA seq
819 aa
AA seq
DB search
MWILSPVEHGGQTHYLLSAKEYVVGRKNCDILLPNDQSISRFHAHLIVTDQTLTLRDTSK
YGTSINSQPLPENTPVTLKSGDNITFGVFLSKFSVDYLKPVVCSSCLDNDGKAVLSQAVQ
VFGGKLVSLWTQDCTHLVMPSVKVTIKTICALLCGCPIVKPDFFSELSTAAQQKLPLPQA
ERFIPDIDEPSLINEDVNLEPDLRRKGIFAGTTFIFLTSKQLKRLGAAVSFGGGTSRLLE
EGSLPRDLLESPQSCVVDFTAGNSQPILPASTIDWHNSVKNLVQRKGFRVITESEIGLAV
MYASRDIYCNPSSLIKGTVTKTMSRIPSESLSQNVVDETVLPAASQNITAYAVNTETSQM
TEHSAERGNTALRKTQEKRQNHSTFLPNGPKATTQKMSTHCIVANSPSFSTTENAHSQMK
KLESKVAGQDINIATFQPPLERSTGGKKTFEPKKFPQKKQISPQVSPQKQATMTSFFKPV
NKKRPLDEELSVVMSEPKRPVLESDINVQVAETFPASKDAPSCSNKGLAAPSQTPTDSEN
DLFIGRGAALSHMKRKRKELEEEIDMVELESIMSESMDSLEESFSVSKSPQALNHSEWMS
KDKEALSKKQRVAHENDDNRIERSPLELVEELVPCQPHHSEHKIVSSTTEKLHPSTERMS
SKFSCGSTSQHVEANRDSSKEVSGHFKGDEGTGLHLMKPVDVKQETKNTQLDEDLPKKLI
LVEFRSLTVNVLPKTKLQQVHTNGFVNNFKHFRKMRMPGTENSAHIIRGADLLAHNRGKN
SELDEWLKDAEEDERQSRLEESEGDNLFRYNPSKLTKKR
NT seq
2460 nt
NT seq
+upstream
nt +downstream
nt
atgtggattttgagtccagtggagcacggaggtcagacccattatctcctctccgctaaa
gaatatgtggtgggtcgcaagaactgtgacatcctgctgcccaatgaccagtcgatcagc
agatttcatgcccacctgatcgttactgatcagaccctgaccctgagggacacctccaag
tacggtacctccataaacagccaacccctaccagagaacactccagtcaccctcaagtca
ggggacaacattacatttggagtttttctatccaaattcagtgtggattatctgaagcca
gtggtgtgttcttcttgtttggacaatgacggcaaagcagtactttctcaggctgtgcag
gtctttggaggtaagctggtgagcttgtggactcaagactgcacccacttggtcatgcct
tctgttaaagtcaccatcaagacgatatgtgctctgctgtgtggctgtcccattgtgaag
ccggatttcttctcagagctcagcacagccgctcaacagaagctgccccttcctcaagct
gagagattcatccctgacattgatgagcccagcttgattaatgaagacgtgaacctggag
ccagatctcaggcgcaaggggatttttgcaggaacaactttcattttcctcacaagcaag
cagctcaagcgtcttggtgcagcagtgagttttggaggtgggacgagccgactcctggag
gagggctccctgccccgtgacctcctggagtccccacagagctgtgtggtggattttact
gctggcaactcccaaccaatccttccagcttcaaccatagattggcataattctgtaaaa
aacctagttcaaaggaaaggctttcgagtcatcacagagtctgaaattggattggctgtc
atgtacgcctcacgtgacatttactgcaacccttccagtctaattaaaggcacagtgaca
aagacgatgtcaagaattcccagtgaatctctctcccaaaatgtggtggatgaaaccgtt
ttacctgcagcatcacaaaacatcacagcatacgcagtcaacacagagacgtcgcaaatg
acagagcactccgcggaaaggggaaatacagcgctgagaaagactcaggagaaaaggcag
aatcacagcacctttcttccaaatggccctaaagccactacccagaagatgagcactcac
tgcattgtggccaattcaccatcgttcagtacaacagaaaacgcacattcccagatgaag
aaactagagtccaaagtggcaggccaggacattaacatagcaacttttcagcctcctttg
gaaaggtccactggtggtaagaagacattcgagcccaagaaatttcctcagaaaaaacaa
atctctccacaagtttccccacagaaacaagcaacaatgaccagcttttttaaaccggtc
aacaagaaaaggcctttggacgaggagctctccgtcgtcatgtcagaaccaaagcgtcct
gtacttgaatctgacatcaacgttcaggtggcagagacctttccggcatccaaagatgct
ccctcgtgttcaaacaaaggcctcgcggccccttcccagacacctacggactccgaaaat
gatcttttcatcggtcgtggggcagctttgtcccacatgaaacgaaagaggaaggagctg
gaagaagaaatagatatggtcgaattggagtccataatgtctgagagtatggactccttg
gaggagtctttttcagtcagcaaatccccgcaagcgctcaatcattctgaatggatgtca
aaagacaaagaggctttgagtaagaagcaacgagtagcccatgaaaatgatgacaacagg
atcgaaaggtcaccgttggaattggtagaagagctggtcccatgtcagcctcaccacagt
gagcacaaaattgtctccagtacgactgagaagcttcatccatcaacagagagaatgagt
agcaaattttcatgtggcagcacaagtcagcatgttgaagctaacagagactcctccaaa
gaggtgtcaggccacttcaaaggagatgaggggactggacttcacctcatgaaacctgtt
gatgtgaaacaggagaccaaaaacacacaactggatgaagacctccctaaaaagctgatt
ttggtggaatttagatccctcacagtgaacgtactccccaaaactaaactacagcaggtg
cacaccaacggttttgtgaacaacttcaaacatttccgcaagatgcggatgcccgggact
gagaactccgcacacatcatcaggggggctgatctgctggctcacaaccgtggcaagaat
tccgaactcgatgaatggctgaaggatgcagaggaggacgagcggcagagcagactggag
gagagtgaaggagataacctctttaggtacaacccttctaaattaaccaagaagagatga
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