Syngnathoides biaculeatus (alligator pipefish): 133501242
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Entry
133501242 CDS
T09681
Symbol
exosc7
Name
(RefSeq) exosome complex component RRP42
KO
K12589
exosome complex component RRP42
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Pathway
sbia03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
133501242 (exosc7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sbia03019
]
133501242 (exosc7)
Messenger RNA biogenesis [BR:
sbia03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
133501242 (exosc7)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
133501242 (exosc7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
133501242
NCBI-ProteinID:
XP_061676878
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All DBs
Position
1:complement(1697073..1701216)
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AA seq
303 aa
AA seq
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MTSYSRDTHDLNMATVQVSEAEKVYILHGIRDDLRVDGRGCEDYRHMEVETDLVSNTDGS
AKVSLGHTAVLVGIKAEIGKPRPMAPDEGYLEFFVDCSANATPEFEGRGGEELGTELSNT
LYKVFNNRHSVDLKRLCISKGEHCWVLYVDVLLLQCDGNLYDAISVAIKAALFSTKIPKV
HISADEEGGKEIELSDDPYDCMRLDVENVPCIVTLCKVGHRHVVDATLQEKACSVASLII
SVTHKGAVTCVRKVGGGSLDPESIFEMTETGKRVGKALHVPLMKLLQQEESLGTMRQKVG
FLG
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcatattcacgcgacacgcacgatttgaatatggcaacagtgcaagttagcgaa
gctgaaaaagtgtacattttacatggcataagggatgatctacgagtggatggaaggggt
tgtgaagactatcgacacatggaggttgagactgacttggtgtccaataccgacggatca
gcgaaagtttctctggggcacacagcagttctagtgggaattaaggctgaaattgggaaa
ccgaggcccatggctccagatgaaggctatttagagttctttgtcgattgttcagccaac
gccacccccgagtttgaggggcgaggaggggaggagctcgggacggagctcagcaatacg
ctgtacaaagtcttcaacaacaggcacagcgtggacttgaagaggctgtgtatcagcaag
ggagagcactgctgggtgctctatgtggatgtattgctcctgcaatgtgatggaaacctg
tatgatgccatctcagtagctatcaaggcagctctcttcagcacaaaaatccccaaagtg
cacatatcagccgatgaagaaggaggtaaggaaatcgagctgtcagatgacccttacgac
tgtatgaggctcgacgtggagaacgttccctgcatagtgacattgtgcaaggtgggccac
aggcacgtggtggacgccaccctgcaggagaaggcgtgctccgtagccagcctcatcatc
tctgtcacacacaagggagccgtcacctgcgtgcggaaggtggggggaggcagcctggac
cctgagagcatctttgaaatgacagaaacaggtaaacgtgtcggcaaagcccttcacgta
ccgctcatgaagcttctgcagcaggaggagagtttaggaacaatgagacagaaagtggga
tttcttggttag
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integrated database retrieval system
