Syngnathoides biaculeatus (alligator pipefish): 133501304
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Entry
133501304 CDS
T09681
Symbol
prpf3
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp3
KO
K12843
U4/U6 small nuclear ribonucleoprotein PRP3
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Pathway
sbia03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
133501304 (prpf3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sbia03041
]
133501304 (prpf3)
Spliceosome [BR:
sbia03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
133501304 (prpf3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRP3
Prp3_C
PWI
Motif
Other DBs
NCBI-GeneID:
133501304
NCBI-ProteinID:
XP_061676946
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All DBs
Position
5:28683730..28697121
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AA seq
695 aa
AA seq
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MSLPKREVEELRPFVERTVKKVLGFSEPTVVTVALQCVGKGMDKRKTTDQLHPFLNESAG
SFVERLFEGLEESRSSRSNKGSGEKTRKRDLKEVFSDETETAGVKGAVATATDGTVTKRK
RVPRFQEIEEPEVIPGPPSESPTMLSKMQIKQMMEEATKQIEQRRKQLNISSPAQTQMES
PMSRLLGHAGVGGSIMPSQAASFMNDAIEKARKVAEEQARLQSQMTMKPNVLGLLGNSIP
HNFVALANLHAMGIAPPKVEVKEVNKPTPLILDDKGRTVDATGKEIELTHRMPTLKANIR
AVKREQFRQQLKEKPGEELESTSYFDNRVTIIAPQRTRKTFKFHEQGRFEKIAQRIRTKA
QLERLQNEISQAAKKTGIHASTKLALIAPRKDIGDSEVPNIEWWDSFILPTNIEIKPETK
LDEVVLFGVTNLVEHPAQISPPIDKDKPVTLGVYLTKKEQKKLRRQTRREGQKEVQEKVR
LGLMPPPEPKVRISNLMRVLGTEAVQDPTKVEAHVRAQMAKRQKAHEEANAARKLTAEQR
KEKKVKKLKEDLSSGVHITVYRIRNLQNPAKKFKVEANANQLYLTGTVVLHKDVNLVVVE
GGPKSQKKFKKLMMHRIKWEEHNSKRDDPDGDDETRRNNKCWLIWEGTAKERSFGDVKFK
QCPTENMAREHFKKHGTEHYWDLALSKSVLDSADD
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcttcctaaacgggaggtggaggagttgaggccatttgtggagcgcaccgtgaag
aaggtgctcggtttctcggagcccactgtggtcactgttgctttgcagtgcgtcgggaag
ggtatggacaaaaggaaaacaacagaccaactgcatcctttcctaaatgagtcagctgga
agttttgtcgagcgtcttttcgaaggattggaggagagccgcagctcccgtagcaacaaa
ggaagtggagaaaagacacgcaagagagacctgaaggaggtgtttagcgatgagacggaa
acagcaggagtgaaaggtgctgtggccaccgccactgacggtacggtcaccaaacgcaaa
cgggtaccccgctttcaggagattgaggagcctgaggtcataccgggaccaccatcggag
agccccacaatgctcagcaaaatgcagatcaaacagatgatggaggaagccacgaagcag
atagaacagcgaaggaaacaactgaacatttcatctcctgcacagacacaaatggaatct
ccgatgtcccgtcttctcggccacgccggtgtaggcgggtccatcatgccctcacaggct
gccagcttcatgaacgacgccatcgagaaggctcgcaaggtcgccgaggagcaggcgcgc
ctccagtctcagatgaccatgaagcccaatgtcctcggattgttgggaaactccatccct
cacaactttgtggcactggccaaccttcacgccatgggaattgccccaccgaaagttgaa
gtgaaggaggtgaataagccgacgcccctcattttagatgacaagggtaggacggtggat
gccactggcaaagagattgagctcacacatcgcatgcccacgctcaaagctaatattcgg
gcggtgaagagagagcagttccgtcagcaactgaaagagaagcctggagaggagctggag
tccacttcctactttgacaatcgcgtaacaataatagcacctcagcggactcgcaagacc
ttcaaatttcatgaacagggtcgatttgagaagattgctcaaagaattcgaacaaaggcc
cagttggagaggttacagaatgagatttcgcaggctgcaaagaagactggaatccatgca
tcaaccaagctggctctgattgctccaaggaaagacattggagacagcgaagtgcccaac
atcgagtggtgggactccttcattttgcccaccaacatagagataaagccagaaaccaaa
cttgatgaggtggtgcttttcggggtgaccaatttggtggaacatcctgcccaaattagc
cctccaattgacaaagacaagccagtcaccctgggtgtatatttgaccaagaaagaacag
aagaagctgagaagacagactagacgggaaggccaaaaagaagtacaagaaaaggtccgt
ctcggtctgatgcctccaccagagcccaaagttcgcatctcaaacctgatgagagtgttg
gggactgaggcagttcaggaccccacaaaggtggaagcccatgtcagagcacagatggcc
aagaggcagaaagcccacgaggaggccaacgcagcgcgaaagctcacagcagaacagcgc
aaagaaaagaaagtgaaaaagttgaaagaggatctcagcagtggggttcacattacggtg
tacaggatccgtaacctacaaaatccagcaaagaagtttaaagtggaagccaatgccaac
cagctctacctgactggaactgtagttctgcataaagatgtcaacttggttgtggttgaa
ggaggtccgaaatctcaaaagaagttcaagaaactcatgatgcatagaatcaaatgggag
gagcataactccaagagagacgatccagatggtgatgacgagacaaggaggaacaacaag
tgctggttaatttgggagggcacagccaaagagcgctcctttggagatgtgaagttcaag
cagtgccccacagaaaatatggcccgggaacacttcaaaaagcatggcacagaacactac
tgggacctggctctcagtaagagtgtgctggacagtgcggacgactaa
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