Syngnathoides biaculeatus (alligator pipefish): 133501305
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Entry
133501305 CDS
T09681
Name
(RefSeq) syndecan-2-like
KO
K16336
syndecan 2
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Pathway
sbia04514
Cell adhesion molecule (CAM) interaction
sbia04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
133501305
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
133501305
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
sbia04090
]
133501305
00535 Proteoglycans [BR:
sbia00535
]
133501305
CD molecules [BR:
sbia04090
]
Proteins
133501305
Proteoglycans [BR:
sbia00535
]
Cell surface proteoglycans
Syndecan family (transmembrane HSPG)
133501305
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Syndecan
HBEGF_C
Endomucin
BAMBI_C
SMAGP
Motif
Other DBs
NCBI-GeneID:
133501305
NCBI-ProteinID:
XP_061676949
LinkDB
All DBs
Position
5:complement(3728111..3741467)
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AA seq
270 aa
AA seq
DB search
MRTLWLLFLVGLAPGFINDKMLVSSQSLSFVGDDLYIEGQTSGDLPIDDEDGDDFGSGSG
SGDYDKDDEEALIRTTFVGSNKNKSEGMLPSRPTADPADRRPTEAADGRDPPTAVVDGET
TAMGEDTEGEKAATPDWFTQAPSPRSTSEGKDGKEADEDNSLDRWDDPSSAPKDGGDKVA
HEVETNEIVVSRGSRMFDSPDDVTSESMWERTEVLAAVIACVVVGLLCAVFLLVLLAYRM
KKKDEGSYDLGDNKLSTTAYHKAPTKEFYA
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
atgaggactctgtggttgttgttcctcgtcgggctagccccgggattcatcaacgataaa
atgctggtctcttcccagtccctctcatttgtgggagatgacctttacatagagggtcaa
acatcaggtgacctcccaattgatgatgaagacggggatgactttggctcaggatctgga
tccggagactatgacaaagacgacgaagaggcgctgatccgtaccacatttgttggatcg
aacaagaacaagagcgaaggaatgcttccaagtcggccaacggcggatcccgctgaccgt
cggccaaccgaagcagccgacggccgcgatccgccgaccgcggtggtggacggtgagacg
acagcaatgggggaggacaccgagggcgagaaggcggcaactcccgactggttcacgcag
gctcccagtcccaggtccacctcagaaggcaaggacgggaaagaagccgacgaggacaac
agcctggatcggtgggacgacccctcctccgctcccaaagatggcggggacaaagtcgca
cacgaagttgagacaaatgaaattgtcgtcagccgaggcagcaggatgtttgactcgcct
gatgacgtgacgtctgagagcatgtgggagcgaacggaggtgctggccgcggtgatagcc
tgcgtggtggtcggactgctttgcgccgtcttcctcctcgtcctcctcgcctaccgcatg
aagaagaaggacgaaggaagctacgacctgggcgacaacaaactttccacaacggcttac
cacaaagcaccgaccaaggagttttacgcctga
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