KEGG   Syngnathoides biaculeatus (alligator pipefish): 133501388
Entry
133501388         CDS       T09681                                 
Symbol
rbm8a
Name
(RefSeq) RNA-binding protein 8A
  KO
K12876  RNA-binding protein 8A
Organism
sbia  Syngnathoides biaculeatus (alligator pipefish)
Pathway
sbia03013  Nucleocytoplasmic transport
sbia03015  mRNA surveillance pathway
sbia03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:sbia00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    133501388 (rbm8a)
  09122 Translation
   03013 Nucleocytoplasmic transport
    133501388 (rbm8a)
   03015 mRNA surveillance pathway
    133501388 (rbm8a)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sbia03019]
    133501388 (rbm8a)
   03041 Spliceosome [BR:sbia03041]
    133501388 (rbm8a)
Messenger RNA biogenesis [BR:sbia03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     133501388 (rbm8a)
Spliceosome [BR:sbia03041]
 Complex C
  Other components
   EJC/TREX
    133501388 (rbm8a)
SSDB
Motif
Pfam: RRM_1 RRM_3 RRM_5 RRM_7
Other DBs
NCBI-GeneID: 133501388
NCBI-ProteinID: XP_061677104
LinkDB
Position
5:1063923..1068560
AA seq 184 aa
MRTDPPSLAGNMADVLELHEAGGEDFPMDEDESIHKLKEKAKKRKGRGFGSDEGARSRMK
EDYDTVEQDGDEPGPQRSVEGWILFVTGVHEEATEEDINEKFSEFGKIKNLNLNLDRRTG
YLKGYALVEYETYKEAQAAMEGLNGQDLMGQPISVDWGFVRGPPKSRRRTGGRRRSRSPD
RRRR
NT seq 555 nt   +upstreamnt  +downstreamnt
atgcgcactgaccctccctcgctcgcaggcaacatggcggacgttctcgaacttcacgaa
gcgggaggcgaagatttccctatggatgaggacgaaagcatccacaagctgaaggagaaa
gccaagaagaggaaaggacgaggtttcggttctgatgaaggcgccaggtctcgcatgaaa
gaagactacgacaccgtggagcaggatggagacgagccgggtcctcagagatccgtggag
ggttggatcctttttgtgacgggcgtgcacgaggaggccacggaggaggacatcaacgaa
aagttctccgagttcggcaagatcaagaacctcaacctcaacctggatcgcaggacggga
tacctcaagggttacgctctggtggagtacgagacctacaaagaggcccaggccgccatg
gagggcctgaacggccaggacctgatgggccagcccatcagcgtggactggggcttcgtc
cgcgggcctcccaaaagcaggcgcagaaccggcgggcgacgacgcagcaggagtcctgac
aggcggcggcgttga

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