Syngnathoides biaculeatus (alligator pipefish): 133501637
Help
Entry
133501637 CDS
T09681
Symbol
cnot2
Name
(RefSeq) CCR4-NOT transcription complex subunit 2
KO
K12605
CCR4-NOT transcription complex subunit 2
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Pathway
sbia03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
133501637 (cnot2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sbia03019
]
133501637 (cnot2)
Messenger RNA biogenesis [BR:
sbia03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
133501637 (cnot2)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
133501637 (cnot2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
133501637
NCBI-ProteinID:
XP_061677414
LinkDB
All DBs
Position
6:15777298..15782744
Genome browser
AA seq
538 aa
AA seq
DB search
MRSSLLLLALVTKGMFGSRKKFAEFVEVVDNDFADESMYYNQPSMFPHRSDKDMLSSPSP
SSSSGQLSQLGASLYGPQSALGFSVRGMGNSTPQLNRNLTQGSQLQSHITPTTGVPTMSL
HTPPSPSRGSLPMNTRNMLNHSQVGQGLGMSGRTNSMSSSGLGSPNRSSPSIICMPKQQP
ARQAFTVNSMSGFGMNRNQAFGMNNSLSSNIFNGTDGSENLAGLDLSDFPALADRSRREG
TVNPTPVLNPLAGRAPYVGMVTKPSTEQTQDFSIHNEDFPALPGPNYKDPSLTSDDNKTN
LNSTSKSTSNADGPKFPGDKTASAQNNNQKKGIQVLPDGRVTNIPSGMVTDQFGMIGLLT
FIRAAETDPGMVHLALGSDLTTLGLNLNSPENLYPKFASPWASAPCRPQDIDFHVPSEYL
TNIHIRDKLAAIKLSRYGEDLLFYLYYMNGGDLLQLLAAVELFNRDWRYHKEERLWITRA
PGMEPTLKTNAYERGTYYFFDCLNWRKVAKEFHLEYDKLEERPHVPTTFNYNPAQQAF
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atgcgatctagcctgctattgctagcgctagtgacaaaaggcatgtttggttcgagaaag
aaatttgcagagttcgttgaggtagtggacaacgactttgccgatgaaagcatgtactac
aaccagccgtcgatgttcccacatcggtcggacaaagatatgctgtcgtcaccttcgcca
tcctcatcgtcggggcagctgtcacaacttggtgcgagtttgtacggtccacaaagtgcg
ctcggcttttcggtaagaggcatggggaacagtacgcctcaattgaaccgaaatttaaca
caaggctcccagctacaaagtcacatcacccccacaactggtgtccccaccatgtccctc
catacacctccctcaccaagcagggggtctttaccgatgaacacaaggaacatgctgaac
cactctcaggtcggtcaaggccttggcatgagcggcaggaccaatagcatgagcagctcg
ggcctcggaagccccaatcgcagctctcctagcatcatctgtatgcccaaacagcaacca
gcacgccaagccttcactgtaaacagcatgtctggcttcggaatgaaccgtaaccaggct
tttggaatgaacaactcattatcaagcaatatcttcaatggcacagatgggagtgaaaac
cttgcaggactggatctgtcagatttccctgcgttagctgaccggagtcggagagaaggg
accgttaacccaacgccagtgcttaacccgctggccggaagggctccttatgttggcatg
gtgacgaaaccatcaacggaacagacgcaggatttctcgatccataatgaggacttcccc
gcgttgcccggcccaaattacaaggatccgtcgctgaccagtgatgataataaaactaat
ttgaactccacaagtaagagcacatccaacgcagatgggcccaagttccccggggacaag
acagcctcggcgcagaacaacaaccagaagaaagggattcaggtgttgcccgacggtcgg
gtgacgaatattccctctggcatggtgactgaccaatttggcatgattggccttttgacg
ttcatccgtgcagcagaaacggatccgggcatggtccacctagcactcggaagcgacctc
acaacactgggtctcaatttaaattcaccagaaaacctttaccccaagtttgcgtcacct
tgggcttcagcaccttgtcgaccacaggatattgacttccatgttccatcggagtactta
accaatatccacataagggacaagttggccgcgattaaactgtctcgatacggcgaagac
ttgttgttctacttgtactatatgaacggtggagacttgctacagcttctggcagcagtg
gaactctttaaccgggactggcggtaccacaaagaggagcgactttggatcacaagggca
cctggcatggagccgacactgaagaccaacgcctatgagaggggaacctactactttttt
gattgtcttaactggagaaaagtggcaaaggaattccatctggagtatgacaagctggaa
gagaggcctcacgtgccaacaacattcaactacaacccagcccagcaggccttctaa
DBGET
integrated database retrieval system
