Syngnathoides biaculeatus (alligator pipefish): 133501891
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Entry
133501891 CDS
T09681
Symbol
lingo1a
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 1
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sbia04131
]
133501891 (lingo1a)
Membrane trafficking [BR:
sbia04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
133501891 (lingo1a)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
I-set
LRR_1
Ig_3
ig
Ig_2
LRR_9
LRR_Zer-1
LRRNT
V-set
Motif
Other DBs
NCBI-GeneID:
133501891
NCBI-ProteinID:
XP_061678022
LinkDB
All DBs
Position
6:24399058..24553037
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AA seq
615 aa
AA seq
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MAAREATGHSFLVTCLRPILILLLSAVLSGSTTGCPSRCECNAPERSVMCHRKKLMTVPE
GIPAETRLLDLSKNRIRTINPDEFSNFGNLEHLELSENTISTIEPGAFNNLFGLRTLGLR
SNKLKLIQLGVFTGLSNLTQLDISENKIVILLDYMFQDLYNLRSLEVGDNDLVFISHRAF
HGLSSLEHLSLEKCNLSSVPTEAFTHLHSLITLRLHHLNINIIRDYSFKRLFRLKVLEIA
NWPYLDTMTPNCLYGLNLTSLTIANANLTTIPYVALRHLVYLRFLNLSYNPIHTIDGNKL
HDLLRLQEFHLVGGRLAMIEPYSFRGLNYLKILNVSGNSLTTLEESAFHSVGNLETLALY
DNPLACDCRMLWVFRRRWRLNFNRQQPTCASPEFVQGKEFKDFPDVLQPNYFTCRKSRIR
DRKPQQQFVDEGAIVHFACEADGDPAPAIMWLSPQKKLITTKTIGRISVLPDGSLEVRYA
QIQDNGTYVCIASNAGGNDTALAHLHIHSYSPDWPFQPNKTFAFISNQPAETGANDTRAN
VPFPFDIKTLIIATTMGFISFLGVVLFCLVLLFLWSRGKGNTKHNIEIEYVPRKSDAGMS
SGAVDAPRKFNMKMI
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atggcggctcgggaagcgactgggcacagcttcctggtgacgtgcttgcggcccatcctg
atcctgctgctgagcgccgtgctgtccggctcgaccaccggctgcccgtctcgctgtgaa
tgcaacgccccggagcgctccgtgatgtgccaccgcaagaagctcatgacggttcccgag
ggaatccccgcagaaacccggctgctggacctcagcaagaaccgcataagaaccatcaac
cccgacgagttctccaactttggcaacctggagcacttggagctcagcgagaacacgatc
tccaccattgaacccggcgcattcaacaaccttttcggcttacggacattggggctccgt
agcaacaagctaaagctgatccagcttggcgtcttcacgggcctgagcaacctcactcag
ctggacataagtgagaacaagatcgtcatcctgctggactatatgttccaggatttgtac
aacctgcgttccttggaggtgggcgataacgacctggtttttatctcccaccgggctttt
cacggcctgagtagcctcgagcacctgagtctcgagaagtgcaacctgtcctctgtgccg
acagaggcctttacccacctgcacagtctgatcacactcaggctgcaccacctcaacatc
aatatcatacgggattattcctttaaacgtctctttaggctcaaagtgttggaaattgcc
aattggccatatttggatacaatgaccccaaattgtttgtatggattaaacctgacctcc
ctgaccatagcaaatgctaacctgaccaccattccttacgttgccctaaggcacttggtc
tacttgcgttttcttaacctttcctataacccgatccacaccatcgacggaaataagctc
cacgatcttctgcgtcttcaggagtttcacctggtcggagggcgactggccatgatcgag
ccctactctttccggggtctcaattacctgaagattctcaacgtgtctgggaactccctg
accacgttagaggagtctgcattccattccgtcggcaatctggagactctggccttgtac
gacaaccccctggcctgcgactgtcgcatgttgtgggtattccggcggcgctggagactc
aacttcaaccggcagcagccgacctgcgcctcccctgaatttgtccaaggaaaagagttc
aaggacttcccggacgtcctgcaacccaactacttcacctgccgcaaatccaggattagg
gatcgcaaaccgcagcagcagtttgtcgacgagggagccatcgttcacttcgcttgcgag
gcggacggcgatccggctccggccatcatgtggctctccccgcagaagaagctcatcacc
accaaaactatcggaaggatctccgtgctgccagacggcagcctcgaggtccgctacgcg
cagatccaggacaatggaacgtacgtgtgtatagcgagcaacgcgggcgggaatgacacc
gccctggctcacctgcacattcacagctactcgcccgactggccgttccagcccaacaag
actttcgccttcatctccaaccagcccgcagaaactggcgctaacgacacgcgagctaac
gtccctttccccttcgacataaagacgttgatcattgcgaccacgatgggcttcatttcc
tttctgggcgtcgtcctgttttgcctggtgctgctcttcctttggagccgaggcaaaggc
aacaccaagcacaacatcgagatcgagtacgtgccgcgcaagtcggacgctggcatgagc
agcggcgcggtggacgctcctcgcaaattcaacatgaaaatgatttaa
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