Syngnathoides biaculeatus (alligator pipefish): 133502054
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Entry
133502054 CDS
T09681
Symbol
abcc8
Name
(RefSeq) ATP-binding cassette sub-family C member 8 isoform X1
KO
K05032
ATP-binding cassette subfamily C (CFTR/MRP) member 8
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Pathway
sbia02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
133502054 (abcc8)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sbia02000
]
133502054 (abcc8)
Transporters [BR:
sbia02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC8, 9 subgroups
133502054 (abcc8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_21
ABC_ATPase
nSTAND1
TraD_N
AAA_23
Beta-prop_IFT122_1st
Motif
Other DBs
NCBI-GeneID:
133502054
NCBI-ProteinID:
XP_061678386
LinkDB
All DBs
Position
6:complement(15623066..15673238)
Genome browser
AA seq
1554 aa
AA seq
DB search
MSLAFCGSENNSEAYNVDGGVLNNGCFLDALNVVPHVFLLFITFPILFIGWGSQSSKVHI
HHSTWLHFPGHNLRWLLTFVLLFILVCEVAEGIVSDGFSQSFHLHLYMPAGLAFMAGITS
IVYYHNIETSNFPKLLLALLIYWVLAFIMKTIKFAKYTEHGIGPRQLRYCITCLLVLLYG
LLLAVEINVILGRRYVCFAIPTEVKPPEDLQDLGVRFLQPFVNLLSKATYWWMNTFITSA
HRRPIDLKVIGKLPIAMRALTNYMKLRNAFEDQKRPQGTAPQGPKWIWQALRKAFGRPLI
LSITFRFMADLLGFAGPLCISGIVHHISRDNRTLQQPMRLLGIYFISSKEFLENAYVLAV
LLFFALLLQRTFLQASYYVAIETGIKLRGAIQTKIYNKIMRLCTSNMSMGELTVAQICNL
VAIDTNQLMWFFFLCPNLWAMPVQIVVGVILLYYLLGISALIGATVIAVLAPIQYFVATK
LSQTQKSTLEYSSERLKKTNELLRGIKLLKLYAWERIFCDSVEETRGKELTNLQAFALYT
SISIFMNAAIPIAAVLTTFVVHVHISDDADLSPAVAFASLSLFHILVTPLFLLSSVVRST
VKALVSVQKLSEFFSSDEIGDELEPRPTLTSGSNNHNQNRYQAVPLKVVNRKRPPRDDWN
NYSSHGNPEGDGPPPVVDQDVCIKIRSGYFTWTDGPPTLANVDIMVPFGKLTMIVGQVGC
GKSSLLLAALGEMQRVSGTVTWNSLPNLESEGDESPTDRDTAGDADIRKRCAVAYASQKP
WLLNATVVENITFEMPMIKTRYKAVIEACSLQPDIDILPQGDQTEIGERGIILSGGQKQR
ISVARALYQQTNVVFLDDPFSALDIHLSDHLMQDGILKLLREEKRTVVLVTHKLQYLLHA
DWIIAMKDGTIQTEGTLKNIQKSEPELFEQWKTLMHRQDQEFETETVASSMTDMERKNLR
RAMYSREAAKTEEDEDEESLESDDDDNLSQLLKHTLMVSIDYWLAHWTSNVITAKSDATA
RNCTLVRECGFSHSWYLSVFTMLCCLGIILCLATSVAVEWTGLNVAKELHQNLLNKITLA
PMRLFETTPLGSILNRFSTDTNTIDQHIPTTLECLSRSTLLCVSALGVISYVTPVFLIAL
LPLAVTCYFIQKYFRVASRDLQQLEDATQLPLLSHFSETVEGLTTIRALRYEPRFRQRLL
QFTDANNIASLFLTAANRWLEVRMEYIGACVVLVAAVASITKSLYEQLSTGLVGLGLTYA
LMVSNYLNWMVRNLADMEVQLGSVKRINGLLKTEPENFEGLLNLSQVPDSWPQHGEIQIQ
NLSVRYDATLKPVLKNVHAHISPGQKVGICGRTGSGKSSFSLAFFRMVDMFEGRIVIDDI
DIAKLPLQTLRSRLSIILQDPILFSGTIRFNLDPEMKATDQMLWEALDIAQLKPVVKSLP
GGLDANVTEGGENFSQGQRQLFCLARAFVRKSSILIMDEATASIDMATESILQKVVMTAF
ADRTVVTIAHRVHTILNADLVIVMKRGIILEYDEPQALLNKEDSVFASFVRADK
NT seq
4665 nt
NT seq
+upstream
nt +downstream
nt
atgtccttggcgttctgtgggagtgagaataactctgaggcctacaacgtggacgggggc
gttctgaacaacggatgtttcctggacgcgctcaacgtggtgccgcacgtcttcctcctc
ttcatcacattccccatccttttcatcggttggggaagtcagagctcaaaggtccacatc
caccacagcacctggctccactttcccggtcacaacctgcgctggctgctcacttttgtg
ctcctcttcatcctcgtgtgtgaggttgcggagggcattgtctctgatggattcagccaa
tccttccaccttcacctgtacatgcctgcaggtcttgcctttatggctggcatcacctcc
atcgtgtactatcataacattgagacctccaacttccccaaactgctattagccctcctt
atctattgggttcttgccttcatcatgaaaaccatcaaattcgccaaatacacagagcac
ggtatcggccccaggcagctacgctactgcatcacgtgcttgctggtgctgctctatgga
ctcctgctggctgtggagatcaatgtgatcctggggaggcgatacgtgtgtttcgccatc
ccgacagaggtgaagccccccgaggaccttcaggacctgggtgttcgttttctgcagccc
tttgtcaacctgctctccaaagccacctactggtggatgaacaccttcataacctctgct
cacaggcgacccattgacctcaaagtcattggaaagctgcccatcgcaatgagggccctc
accaactacatgaagctccgcaacgccttcgaagaccagaagagacctcagggcacggcg
ccgcagggacccaagtggatctggcaggccttgaggaaagcgttcggcagacctctcatc
ctcagcatcacattccgcttcatggccgacctgctgggcttcgccggtccgctctgtatc
tccggcatcgtccatcacatcagcagggacaaccgaaccctccagcaaccgatgaggttg
ctggggatctatttcatttcatccaaggagtttctggagaatgcatatgttttggccgtc
ctgctctttttcgcattgctcctgcaaaggacattcctccaggcctcgtactacgtggct
attgagacggggatcaagttacgtggggccatacagaccaaaatctacaacaagatcatg
cgtttgtgcacatccaacatgtccatgggcgagctaactgtggctcagatttgcaacctg
gttgctatagataccaaccagcttatgtggttctttttcctctgtccaaacttgtgggcc
atgcccgtgcagattgtagtgggagtgatcctgctctattacctgttaggaatcagtgcc
ttgattggagcaactgtcattgctgtgctagcgcccattcagtattttgttgccacaaag
ctgtcgcagacacagaagagcactctggaatattccagcgagcgcctgaagaagaccaat
gaactgctacgaggcatcaaattactgaagctgtacgcatgggaacgtatcttctgcgac
agtgtggaggagaccaggggcaaggagctcaccaacctgcaggcctttgcactgtacact
tccatatccatcttcatgaatgcagctattcccatcgcagctgtgttgacgacatttgtt
gttcacgtgcacatctctgacgacgctgacctctctccagccgtggccttcgcctccctc
tccctgtttcacatcctggtcacgcctctcttcctactctccagtgtggtgcgctccaca
gtcaaggctcttgtcagtgttcaaaagctcagcgagtttttctcaagtgatgagattgga
gatgagctggaaccccgaccaacactgacctcgggctccaacaaccataaccaaaatagg
taccaggctgtgcccttgaaagtggtgaacaggaagcgtcccccgagagacgactggaac
aactacagctcacatgggaacccggagggcgacggaccccctccggttgtggaccaagat
gtttgtatcaagatacgcagcggttatttcacatggacagacggaccgccgacacttgcc
aacgtggacatcatggttcccttcggcaagctgaccatgattgtggggcaggtgggttgt
gggaaatcctccctgttgctcgcggcactgggtgagatgcaacgagtatcaggaacagtc
acctggaacagtttgccgaatctggagtcagagggtgatgaaagtcctacagatcgagat
acagctggtgatgctgatatcaggaagagatgtgcagtggcctacgcatcccagaagcct
tggctgttgaacgccactgtcgtagagaacatcacatttgagatgccaatgatcaaaacc
agatacaaagctgtcattgaggcctgctcacttcagcccgacatcgacatccttcctcag
ggggaccagacagagattggtgaaaggggaatcatcctctctggagggcagaagcagcgt
atcagtgtggccagagcattgtatcagcagaccaatgttgtctttctggacgacccattc
tcagctttagacattcacttgagtgaccatctaatgcaagatggcatcctcaagcttctg
agagaagagaagaggaccgtggttttggtcacccacaaattacagtatctgctgcatgcc
gactggattattgccatgaaagatggcaccatccaaactgaaggtacactgaagaacatc
caaaagtctgaacctgagctctttgagcagtggaagacgctaatgcacagacaggaccag
gagtttgagacggagacagttgcatcaagcatgacagatatggagaggaaaaacctacgg
agagcaatgtactccagagaggctgctaagactgaggaggatgaggacgaagaatccttg
gagagtgatgatgacgacaacctgtcgcagctcctaaaacacaccctcatggtgtccata
gactactggctggcacactggacgtcaaatgtcatcacggccaagtcggacgccacagca
cgcaactgtacgcttgttcgggagtgcggcttcagtcactcctggtatctgtcggtgttc
accatgttgtgctgcctcggcatcattctgtgtttggccacctccgtggctgtggaatgg
accggccttaatgtggccaaggagctccaccagaacctcctgaacaagatcactctggcc
cccatgaggttgtttgaaaccactccacttggcagcatcctcaaccgattttccacagac
acaaacacaatcgaccagcacatcccgaccaccctggagtgtctctcacgctccacactg
ctgtgcgtgtcggccctgggggtcatttcctacgtcacccccgtgttcctcatcgccctc
ctgccactggctgtcacctgctacttcatccagaaatactttcgggttgcttcaagggac
cttcagcagctggaggacgccacccaactgcctttgctctcccacttctctgagactgtg
gaaggtcttaccaccatcagggccctcagatatgagcccaggttcagacagaggttactc
cagttcacagacgccaacaacatcgcctcgctcttccttacagcagccaatcggtggtta
gaggtccgcatggaatatatcggggcctgcgtggtgttggtggcagctgtggcttccatc
acaaagtcgctctacgaacagctgtcgactggactggtggggctgggcctcacctatgca
ctcatggtttccaactatttgaactggatggtgcgtaacctggcagacatggaagtacag
ctgggatcggtcaagagaattaacggcctcctcaaaacggaacctgagaattttgagggt
cttctcaatctgtcccaggtccctgacagctggccccagcacggtgaaatccagatccag
aacttgagcgtccgttatgacgccacgctcaaacctgtgctcaaaaacgtccacgcgcac
atcagccctggacagaaggtggggatctgtgggaggacaggcagcggcaaatcatccttc
tccctcgccttcttccgcatggtggacatgtttgaagggaggattgtgatcgacgacatc
gacattgccaagctacctctgcagacgctgaggtctcgtctgtccatcatcctccaagac
ccgatcctcttcagcggcaccattcggttcaacctggacccagagatgaaggccacagat
cagatgctttgggaagctttggatattgcgcagcttaagcctgttgttaagtcacttcca
ggcgggttggatgccaatgtgacagagggaggagaaaacttcagccagggtcaacgtcag
ctattttgcctggccagggccttcgtgaggaaaagcagcatcctcatcatggacgaagcc
acagcgtccatcgacatggcaacggagagcatcctgcagaaagtggtcatgactgccttt
gctgacagaacagtggttacaatagcacatcgcgtccacactatactgaatgccgacctg
gtgattgtaatgaagcgggggatcatcctggagtacgatgagccccaggccctgctgaat
aaggaggacagcgtctttgcctccttcgtgcgagcggacaagtag
DBGET
integrated database retrieval system
