Syngnathoides biaculeatus (alligator pipefish): 133502112
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Entry
133502112 CDS
T09681
Symbol
matn1
Name
(RefSeq) cartilage matrix protein isoform X1
KO
K19467
matrilin
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
sbia04990
]
133502112 (matn1)
Domain-containing proteins not elsewhere classified [BR:
sbia04990
]
Von Willebrand domain-containing proteins
VWA domain-containing proteins
133502112 (matn1)
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Motif
Pfam:
VWA
VWA_2
Matrilin_ccoil
FXa_inhibition
VWA_3
cEGF
EGF_CA
EGF_3
Plasmod_Pvs28
HSBP1
hEGF
EGF_LRP2
Motif
Other DBs
NCBI-GeneID:
133502112
NCBI-ProteinID:
XP_061678518
LinkDB
All DBs
Position
1:complement(15620411..15626668)
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AA seq
492 aa
AA seq
DB search
MTPPPTLLLALMLGLTGAQATVDLRTAAAMAAAGLCKTRPTDLVFIVDSSRSVRPSEFEQ
VKVFLAKVIEGLDVGPNATRVGVVNYASRVKNEVSLKTHRTKAGLVKAVTRVEPLSTGTM
TGLAIQFALNVAFSENEGGRAKSPDISKVAIIVTDGRPQDNVKDVAQRARDAGIEIFAIG
VGRVDMSTLKQMASEPLDDHVDYVESYSVIEKLTKKFQEAFCVSDLCATGDHDCEQVCVS
SPGSYKCACKDGFTLMDDGRSCSACSNSATDVVFLIDGSKSVRPENFELVKKWINQIVDK
LDVSDTKAHVGLVQYSSLVRQEFPLGRHNNKKDLKEAVKKMAYMERGTMTGQALRYLTDK
SFSAGHGARPGVSKVGIVFTDGRSQDYIGEAAKKAKEMGFKMYAVGVGNAVEGELKEIAS
EPTGEHYFYTADFKAMTQIAKKLQINICHEEDPCECDSLVKFQKKVEEALQALTKKIENM
SKRIAVLENKIV
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgacgccgccgccgacgctgctcctggcgctgatgctcggcctgacgggcgcgcaggcc
accgtcgacctccgcacggccgcggccatggcagcggcggggctctgcaagacgcgcccc
accgacctggtgttcatcgtggacagcagccgcagcgtgcggccctcggagttcgagcag
gtcaaagtcttcctggccaaggtcatcgagggcttggacgtgggtcccaacgccacccga
gtgggcgtggtcaactacgccagccgtgtcaagaacgaggtgtcgctgaagacccaccgc
accaaggccggcctggtcaaggcggtgaccagagtggagccgctgtccacgggcaccatg
acgggcctggccatccagttcgcgctcaacgtggccttcagtgagaacgagggcggtcgc
gccaagtctcccgacatcagcaaggtcgccatcatcgtgacggacggccgcccccaggac
aacgtgaaggacgtggcccagcgggcgcgcgacgccggcatcgagatcttcgccatcggc
gtgggccgcgtggacatgagcacgctcaagcagatggccagcgagccgctggacgaccac
gtggactacgtggagagctacagcgtcatcgagaagctcaccaagaagttccaggaggcc
ttctgtgtgtcggacttgtgcgccaccggcgaccacgactgcgagcaggtatgcgtcagc
tcgcccggatcgtacaagtgcgcctgcaaagacggcttcaccctcatggacgacgggcgc
agctgcagcgcgtgcagcaactccgcgacggacgtggtcttcctgatcgacggctccaag
agcgtccgtccggagaactttgagctggtcaagaagtggatcaaccagatcgtggacaag
ctggacgtgtcggacaccaaagcccacgtcggtctggtgcagtactccagcctggtccga
caggagttcccgctgggccgccacaacaacaagaaggacctgaaggaagccgtgaagaag
atggcctacatggagcgcgggacaatgaccggccaggcgctgcgctacctgacggacaag
agcttcagcgcgggccacggcgcccggcccggcgtctccaaggtgggcatcgtcttcacg
gacggacgcagccaggactacatcggcgaggccgccaagaaggccaaggagatgggcttc
aagatgtacgcggtgggcgtgggcaacgccgtcgagggcgagctgaaggagatcgcctcg
gagcccaccggcgagcactacttctacaccgcggacttcaaggccatgacgcagatcgcc
aagaaactgcagatcaacatctgccacgaggaggacccgtgcgagtgcgactccctggtg
aagttccagaagaaagtagaagaagcgctgcaggcgctaacgaagaaaatcgagaatatg
tccaagaggatcgccgtgctggagaacaaaattgtctga
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