Syngnathoides biaculeatus (alligator pipefish): 133502143
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Entry
133502143 CDS
T09681
Symbol
bmal1a
Name
(RefSeq) basic helix-loop-helix ARNT like 1a isoform X1
KO
K02296
aryl hydrocarbon receptor nuclear translocator-like protein 1
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sbia03000
]
133502143 (bmal1a)
Transcription factors [BR:
sbia03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
133502143 (bmal1a)
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Gene cluster
GFIT
Motif
Pfam:
PAS_11
PAS
PAS_3
HLH
PAS_9
Per3-like_PAS-A
PAS_4
bHLH_INO2
PAS_2
bHLH_NCOA
bHLH_NPAS4
PAS_8
bHLH_HIF1A
bHLH_SAC51
Host_attach
Motif
Other DBs
NCBI-GeneID:
133502143
NCBI-ProteinID:
XP_061678584
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All DBs
Position
6:complement(6926301..6990977)
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AA seq
639 aa
AA seq
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MEGDDFNTEAVMNICDDLMADQRMDISSTMTDFMSPSSTDLISSSISTPSMDYTRKRKGS
TTEYQIDGFSFDDMDPDKDKLGSDQPGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPT
CNAMSRKLDKLTVLRMAVQHMKTLRGAANPYTEANYKPSFLSDDELKHLILRAADGFLFV
VGCDRGKILFVSESVFKILNYSQNDLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLID
AKTGLPVKTDITPGPSRLCSGARRSFFCRMKCNRPSVKVEDKEFPSTCSKKKADRKSFCT
IHSTGYLKSWPPTKMGLDEDSEPDNEGCNLSCLVAIGRLHPHIVPQPSLADIRVKPTEYV
SRHAIDGKFVFVDQRATAILAYLPQELLGTSFYEYFHQDDIGHLAECHRQVLQMREKINT
NCYKFKIKDGSFITLRSRWFSFMNPWTKEVEYIVSTNTVVSCPMMEGSEYTQSAASPQSM
DSVLPSEVGGGRRALQTVPGIPGGTRAGAGKIGRMIAEEVMEIQRIRGSSPSSCGSSPLN
ITSTPPPDTCSPGGKKIHNGGTPELASTGILPGPDSVGYPYSNQSIMSDNSHLSIDIMDE
PGSSSPSNDEAAMAVIMSLLEADAGLGGPVDFSDLPWPL
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atggaaggagatgattttaacacagaggctgtgatgaacatctgtgatgacctgatggca
gaccaaaggatggacatctcctctacaatgactgacttcatgtcccccagctccaccgac
cttatctccagctctatcagcactcctagcatggactacactcgtaagaggaagggcagt
actacagaatatcaaatcgatggattctcatttgacgatatggatccagacaaagataaa
ctgggaagtgaccaaccaggccgaataaagaatgccagagaggcccatagccagattgag
aagcgtcgaagggacaagatgaacagcttcattgatgaactggcgtcattggtgcccaca
tgtaatgccatgtcccgtaaattggacaagctcacagttcttcgcatggctgttcagcac
atgaagacactcagaggtgcagcaaatccatatactgaggcgaattataaaccttccttc
ctttcagatgatgagctgaaacatttgattttaagagctgctgatggtttcctgtttgtg
gttggatgtgatcgtggaaagattctttttgtttcagaatcagttttcaagattcttaat
tatagccagaatgacctcataggtcagagtctctttgactatcttcatccgaaggacatt
gccaaggtcaaagaacagctgtcttcttccgatacggcccctcgtgagaggctcattgat
gctaaaactggtcttccagtaaagactgacatcacgcctggaccatctagactttgttct
ggtgccagacgatcatttttctgtaggatgaagtgcaacaggccgtctgttaaagtagaa
gataaagagtttccctcaacctgctcaaagaaaaaagctgatcgcaagagcttctgcacc
atccatagcacaggataccttaaaagttggccccccacaaagatgggtcttgatgaagac
agcgagcctgataacgaaggctgcaacttgagttgcctggtagcgattggtcgactgcac
ccgcatattgttccccaacccagcttggccgatatcagagtgaaacccactgagtatgtt
tcccggcatgccattgatgggaaatttgtcttcgttgaccagagagcaaccgccatcctt
gcttacctcccccaggagctgctgggaacatccttctatgagtatttccaccaggatgac
attggccatctggcagagtgccacagacaagttctgcagatgagagaaaagattaacacc
aactgttacaaattcaagatcaaagatggctctttcatcacactgaggagccgatggttc
agctttatgaacccttggaccaaggaggtggaatacatagtttccacgaacactgttgtg
tcgtgccctatgatggaaggatcagaatacactcaatctgctgcctccccacagagtatg
gacagtgttcttccttcagaagtaggtggaggaagacgggcattgcagacagtgcctggc
attcccggtggcacaagagcaggagctggaaaaattggaagaatgattgcagaagaagtt
atggagattcaaaggatccgaggctcctccccttccagctgtggttctagcccattgaac
atcaccagtacccctccacctgacacctgttctcctgggggaaagaagattcacaatgga
gggacacctgagttagccagcactgggatcctacctgggcctgattctgtcggctatcct
tactccaaccagtccatcatgagcgacaactcccacctgagtatagatatcatggacgag
cctggttccagcagcccaagcaatgacgaggcggctatggctgtcatcatgtccctcctg
gaggcggacgcaggcttaggtggccccgtggacttcagtgacctgccttggcctttgtga
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