Syngnathoides biaculeatus (alligator pipefish): 133502366
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Entry
133502366 CDS
T09681
Symbol
myo5c
Name
(RefSeq) unconventional myosin-Vc isoform X1
KO
K10357
myosin V
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Pathway
sbia04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
133502366 (myo5c)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sbia03019
]
133502366 (myo5c)
04131 Membrane trafficking [BR:
sbia04131
]
133502366 (myo5c)
03029 Mitochondrial biogenesis [BR:
sbia03029
]
133502366 (myo5c)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
sbia04812
]
133502366 (myo5c)
Messenger RNA biogenesis [BR:
sbia03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
133502366 (myo5c)
mRNA cycle factors
P-body specific factors
133502366 (myo5c)
Membrane trafficking [BR:
sbia04131
]
Others
Actin-binding proteins
Myosins
133502366 (myo5c)
Mitochondrial biogenesis [BR:
sbia03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
133502366 (myo5c)
Cytoskeleton proteins [BR:
sbia04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
133502366 (myo5c)
BRITE hierarchy
Motif
Pfam:
Myosin_head
DIL
IQ
nSTAND3
Myosin_N
AAA_22
AAA_16
Motif
Other DBs
NCBI-GeneID:
133502366
NCBI-ProteinID:
XP_061679062
LinkDB
All DBs
Position
6:2160951..2177732
Genome browser
AA seq
1741 aa
AA seq
DB search
MALIQLFTQYNRVWIPDAENVWKSAEIVRDFHHGDHILHLLLENGTELKYPIDTSPPELP
PLRNPDILVGENDLTALSYLHEPAVLHNLKVRFLESRIIYTYCGIILVALNPYKQLHIYG
DAIIQAYSGQNMGDMDPHIFAVAEEAYKQMARDHKNQSIIISGESGAGKTVSARYAMRYF
AVVSKSGSKTQIEDKVLASNPITEAIGNAKTIRNDNSSRFGKFTEISFDNRYRIIGANMR
TYLLEKSRVVFQAESERNYHIFYQMCACAHLPEFKELRLMSADEFHYTSLGGDIIIDGVN
DRKGMEETQQTFSLLGLKEDFQSDVFKVLAAILHLGNVEIKSSGDDRSSISYSDPHLHIF
CELLGVRADDLVRWLCNRRLVLVSETVVKPLHKDRAVNSRDALAKRIYAYMFDCVINRIN
KALQVPGKQHAFVGVLDIYGFETFDINSFEQFCINYANEKLQQQFNLHVFKLEQEEYMKE
DIPWTLIDFYDNQPVIDLIEAKMGILDLLDEECLFPQGTDQSWLQKLYNYLDSNPLFERP
KLSNETFVIQHFADKVEYQCKGFLEKNRDALYEELVEVLRVSQFAFLAKFFQEEGKEGLN
IKGIKVKAARPGVKSANKQLRTSVGDKFCSSLSLLMETLNATTPHYVRCIKPNDEKLPFE
YDSGRVVQQLRACGVLETIRISAQSYPSRWTYFEFYSRYSILMTNEEAGISDKTEMCKYV
LQRFIQDPNQYKFGRTKIFLRAGQVAYLEKLRLDRLRGACITIQKYIRGWFCRRNFLHLR
KATILIQQYIRGKRTVRKAVSAVNLKQGWSAVVIQRYWRGFRIQKVYQTVRLAIITIQAF
TRGWLARKSYTQLVEARKALVLQKYARAWLARRRFNAIRRLVHQVQLSFRVQQLRKKNEE
QSKENRGLVERLTSLASSHSQAMDRLHALETQLEKSANQKAALEAREKKVKEDAFLKMTG
LQSEVDALLIKKENMERIFENNSRDQKEKFDQIKMKLLEEKETQARLRKIAENNLETQRQ
DHEKEVGSLKDEIRKLKDERVSLQMKMEDGDQMTTDLQDQVAQLTKHVKVIPDLRRDLSN
LQNQKNNVDRRMRQQSQEARAKLHDISRLLAGSVVEEDVLLGLTADYSEKTYEAEDLLAA
FDGLEKATRTLENHRKEQKESYETQIEGLRLKVDYLQNENSSLQTLFTEKNNINENIRQE
VFRLSSENSVLPQLKVQISELHRQKNDLKILVEKQKKELEEKADEIKNTLQRRIEEESSK
CRHFEEQAEGLEETKKDLQGRIKDLQEENDHVSRQLQMEREAKNRLRLEATQLSSKNLDF
EELLDQKERIIKQLQNQLINLETAQQAQKNSSPTPKHYLGMLECKKEDESRLIQNLIIDL
KPKGVAVNMLPVLPAYILFMCIRHSDYLNDEDKLQSFMNATIVAVKKVTVAHQNDLASLV
FWLSNMYQLLNCLKQYSGEEEFRKQSTPRQINNCLQNFDLSDHQQVVSDLAICIYHQFIA
AMERALTPAIVPGMLEHESLHGISSLKPRGFIKRSSNNNQDTETYTISFIIQRLSHFHTN
MMQHGTEPHLIKQVVKQLLFHIGATTLNNLLLRKDMCSCSKGMQIRCNISYLEEWLQEKD
LQNCHLIDTLKPLSEAAWLLQVSKSTDDDAKVITEKCTELNTVQIVKILNSYTPFDGFEK
RVASSFVRKVQSLRQDHDGSPQLMMDAYYRFPVTFPFCPSSQALELLQVPASLNLEFLTM
I
NT seq
5226 nt
NT seq
+upstream
nt +downstream
nt
atggcgctgattcaactattcacgcagtacaacagagtgtggattccagatgctgaaaat
gtgtggaaatcggcagaaattgtgagagatttccatcatggagatcacattttacatctg
cttctcgaaaatggcacagaactcaaataccccattgatacgtcgccaccagaactccct
cctcttcgcaacccggacatcttggttggggaaaacgacctcaccgctcttagctacctc
catgaacctgcagtcctgcacaacctcaaagtccgcttcttggagtccagaatcatctac
acctactgtggcatcatcctggtggctttgaatccatacaagcagcttcatatctacggc
gatgcaatcattcaggcatactcgggtcagaacatgggcgacatggaccctcatatattt
gcagtggcagaggaggcttacaaacaaatggccagagaccacaagaaccaatcgatcatc
atcagtggagagtctggagctggtaaaactgtgtcagctcgatatgctatgagatacttt
gctgttgtcagtaaatctggcagtaagacccaaattgaagacaaagtcctggcgtccaat
cccataacagaggccattgggaatgcaaaaacgatcagaaacgacaacagcagccgtttt
gggaaatttaccgagatcagttttgacaacaggtatcgaattattggtgcaaacatgagg
acttacctgttggagaaatccagagttgttttccaggccgagtctgagcggaactatcac
atattttaccaaatgtgcgcctgtgcacatctgccagagtttaaggaactccgactgatg
agtgcggatgagttccattatacgagcttgggtggcgatatcattattgatggtgtcaat
gacaggaaaggcatggaggagacacagcagaccttttcactgttaggactaaaggaggac
tttcagtctgatgtcttcaaagttcttgcagctattcttcatcttggaaatgtggaaatt
aagagttccggtgatgataggtcatccatttcttacagcgatccgcatctgcacatcttc
tgtgagttactgggtgtgcgtgcagacgatttagtgcgttggctgtgcaatcggaggctt
gttctggtttctgagactgtggtgaagccgttgcacaaagatcgcgctgtgaattccagg
gacgcccttgccaagcggatctacgcgtatatgtttgactgcgtcattaacaggatcaac
aaagcgctgcaggtccctgggaagcaacatgccttcgtaggggttctggatatctatggc
ttcgagacgtttgacatcaacagttttgagcagttctgtatcaactatgccaatgaaaag
cttcagcagcagtttaacttgcatgtgttcaaattggaacaggaagagtacatgaaagaa
gacatcccatggacattgatagatttctatgacaatcagccagtcattgacctgattgaa
gccaaaatgggaatcctggacttgcttgatgaagaatgtttgtttcctcaaggcactgat
caaagctggctccaaaaactgtacaactacctggacagcaatcctttatttgagaggccc
aagctgtcaaacgagacgtttgtaattcaacactttgcagacaaggtggagtatcagtgc
aaaggttttcttgagaagaaccgcgatgctctttacgaagaactggttgaagttttgaga
gtcagtcagtttgcatttctggccaaatttttccaagaggaggggaaggaaggcctgaac
ataaaaggtatcaaagtgaaggcggccaggcccggtgtgaaatcagccaataaacaattg
aggacctcagttggagataagttctgcagctctctctctttgctgatggagacactaaat
gctacaactcctcactatgtgcgttgcattaagccaaatgatgaaaagctgccatttgaa
tatgattctgggagggtggtgcagcagctgcgggcctgtggagtgctagaaactatccgc
atcagtgcccaaagttacccatcaaggtggacctactttgagttttatagccggtacagt
atcctgatgacaaacgaggaggcgggtatcagtgacaagacagagatgtgcaaatacgtt
cttcagaggttcattcaggaccctaaccaatacaagttcggtcgcacaaagatcttcctc
cgagctggtcaggttgcgtatttagagaagctgcgtctggaccgactacgaggagcttgc
ataactatccagaaatacatccgaggttggttttgcagaaggaatttcctacatctgagg
aaggcaaccatcctgatacaacaatacatccgtggcaagaggactgtacgtaaagcagtg
agtgcagtaaacctgaaacagggctggtcagcggtggtgatccagaggtactggagaggg
ttccgcatacagaaggtctaccaaacggtacgcttggccatcatcaccatccaagctttc
acacgaggctggctggcgcgtaaatcttatacccagttggtggaagcacgaaaggctttg
gtgctacagaagtacgccagagcatggcttgctcgtcggcgttttaatgccatccgtcga
ttggtgcatcaagttcagctctccttcagggtgcagcagctccgaaagaagaatgaggag
cagagtaaagagaaccgcgggttggtggaaagactgacgagtttggccagctcccattct
caggccatggacaggctacatgctctggagacacagctagaaaaatcagccaaccagaag
gcagctttggaagcaagagagaagaaagttaaagaagatgcttttctgaaaatgactggg
cttcaaagtgaagttgatgcgttactcattaagaaagagaacatggagagaattttcgaa
aataactccagagaccaaaaagaaaagtttgatcaaataaagatgaagctgctggaggag
aaagaaactcaagcaaggcttcgaaaaattgctgagaacaaccttgagacccagaggcag
gaccacgagaaggaagtgggaagcctgaaagacgagatcaggaagctgaaggacgagaga
gtcagcttgcagatgaagatggaggatggcgaccagatgaccactgacctgcaggatcag
gtggcccaactcaccaaacatgttaaggtgattccagacctccgccgggacctcagcaac
ctgcagaatcagaagaacaatgtagatcgaaggatgaggcagcagtcccaagaagcaaga
gctaaactgcatgatatttcaagattactcgcaggcagtgttgttgaagaagatgtactt
ttggggctaactgcagattattcggagaagacatatgaagccgaagaccttctggcagcc
ttcgatggtttagaaaaagctaccagaacgttggagaaccaccgcaaggagcagaaggaa
agctatgagactcaaatagaaggcttgagactgaaagtggattacctccaaaatgagaac
agcagcttgcaaactcttttcactgagaaaaataacatcaatgagaatattcgccaagag
gtgttccggctgagcagtgagaactctgtcctacctcagctgaaagttcagatttcagag
ctgcatagacaaaagaacgatctcaagattcttgtagaaaagcaaaaaaaagagctagaa
gaaaaagcagatgaaataaaaaatacccttcaaaggaggattgaagaagagagttcaaag
tgcaggcactttgaggagcaagctgagggcctcgaggagacaaagaaggatcttcaaggt
cgaataaaagaccttcaggaggagaatgaccacgtgagcaggcaactgcagatggagaga
gaggccaagaatcgactgagactggaagctacccagttatcatccaaaaatttggatttt
gaggagctgctggatcaaaaggagagaatcattaaacaattacagaatcaattgataaac
cttgaaacagcacaacaagcccaaaaaaactcttcacctactcccaaacattatcttgga
atgttggagtgcaagaaagaggatgaatcccgactcatccaaaacctcattatagatctc
aagcccaaaggtgtggcggtcaacatgctccccgttctgccagcttacatcctcttcatg
tgcatacgtcactctgactacctgaacgacgaagacaagcttcagtcttttatgaatgcg
actattgttgctgtcaaaaaggtcactgtggctcaccagaatgacttggcctcattggtc
ttctggctgtccaacatgtaccagctgctgaactgtctcaagcagtacagtggagaggag
gaattcaggaaacaaagcactccccgtcagatcaacaattgcttgcagaactttgatttg
tcagaccaccagcaggttgtcagtgacttagctatctgcatctatcaccagttcatcgcg
gccatggaacgagctctcactcctgcgattgtacctggtatgttggagcacgagagttta
catgggatttccagtttgaagcccagaggcttcattaaacgttccagcaacaacaatcaa
gacacggagacttacaccatctctttcatcatccagcggctctctcacttccacacaaac
atgatgcaacatggcacagagccgcacctcattaaacaggtggtcaagcagctgctcttc
cacattggcgcgaccaccctcaataacctgcttctccggaaagacatgtgctcctgcagt
aaaggaatgcaaattagatgtaacatcagctacctggaagagtggctacaggagaaagac
ctccagaattgtcatcttatagacactctgaagccgttgagtgaggctgcctggctgctg
caagttagcaagtccacggatgacgacgccaaggtgatcacagagaaatgcactgagctc
aacacggttcagatcgtcaaaattctgaactcatacacacctttcgatggttttgaaaag
agggtcgcctcatcgtttgttcgcaaagttcagtctcttcgacaagatcacgacggctcc
cctcagctgatgatggatgcatattatcgtttcccggttacgtttcctttctgcccatcc
tcgcaggctctcgagttgctgcaggttcccgctagccttaacctggaatttctaacgatg
atctga
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integrated database retrieval system
