Syngnathoides biaculeatus (alligator pipefish): 133502410
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Entry
133502410 CDS
T09681
Symbol
pard6a
Name
(RefSeq) partitioning defective 6 homolog alpha isoform X1
KO
K06093
partitioning defective protein 6
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Pathway
sbia04144
Endocytosis
sbia04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
133502410 (pard6a)
09144 Cellular community - eukaryotes
04530 Tight junction
133502410 (pard6a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sbia03036
]
133502410 (pard6a)
Chromosome and associated proteins [BR:
sbia03036
]
Eukaryotic type
Centrosome formation proteins
Pericentriolar materials (PCM)
Centriolar satellite
133502410 (pard6a)
BRITE hierarchy
SSDB
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Paralog
Gene cluster
GFIT
Motif
Pfam:
PB1
PDZ
PDZ_6
Cwf_Cwc_15
CENP-B_dimeris
Motif
Other DBs
NCBI-GeneID:
133502410
NCBI-ProteinID:
XP_061679162
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Position
6:5459709..5495700
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AA seq
403 aa
AA seq
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MILAAVLQFVTQTERRMSRQLQQQISFKALDGVVEVKSKFEAEYRRFAFKRNCPGGFQEF
YTLLQTIHRIPEVDMLLGYADDHGDLLPINNDDNFNKAISSANPLLRIIITRKEDEPVGF
GTNSLQRHKKGLGLTGLRNAGSLSSHSKSKIGLMIGRPQNFRQISSIIDVDILPETHRRV
RLHKHGTHKPLGFYIRDGASMRVTPYGVEKVPGVYISRLVRGGLAESTGLLGVNDEILEV
NGIDVTGKSLDQVTDMMVANSHNLIVTVKPANQRNNVMHRGSKNTGNSGSFGSNGSTGSA
LSHDSTGPASQSTPITASNSIVEGDSDEENDDDDDDDDDDDDGDLILESDCLMFYQNHNN
MNFTSERLGNTPVVRNLQQSVSMPEYMAANLRAHQNGHQSQTA
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atgattttagctgcagtgctgcagtttgtcacccaaaccgagcgaagaatgtcacgacag
ctacagcagcagatttcgttcaaagctttggacggtgtggtggaggtcaaaagtaaattt
gaagcagaataccgtcgctttgctttcaagaggaactgcccaggtggcttccaagagttc
tataccctcctccaaactatccatcgcattcctgaagtagacatgttattggggtacgca
gatgaccatggagacctccttccaatcaacaatgatgataacttcaacaaagctatctca
tcagcaaatcccttgcttcgcattattataaccaggaaagaggatgaacctgtaggtttt
ggaaccaactccctccaaaggcataaaaaaggcctgggattaacaggacttcggaatgct
ggctcattgtcttcacattcaaagagcaaaattggtctcatgattggccgaccacagaac
ttccgtcaaatttcatcaattattgacgtggatattctaccagagacacaccgccgtgta
cggctccataagcatggtacccataaacccttgggcttctacatccgagatggggccagc
atgcgagtaacaccttatggtgtagaaaaggttccaggagtatacatatcccgccttgtt
cgtggtggtcttgcagagagcactggacttttgggagttaatgatgaaattcttgaggtc
aatggcatcgatgtcacaggaaaatctttagaccaggtgacagacatgatggtggccaac
agccacaatcttatagtgacagtgaaaccagctaatcagaggaacaatgtcatgcatcga
gggagtaaaaacacaggaaattctggttcttttggatcaaacggatctacaggctcggca
ctatcgcacgattcaacgggtcctgcctctcaaagcacccccatcactgcaagtaacagc
attgtcgagggtgacagtgatgaagaaaatgatgatgatgatgatgatgatgatgatgat
gatgatggcgacctcatcctggaaagtgactgtttgatgttctaccaaaatcataacaat
atgaacttcaccagtgaaagattgggcaacacccctgtggttagaaacctccaacagagt
gtctccatgcctgaatacatggcagcaaacctgagagcccatcaaaatgggcaccagagt
cagactgcttga
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