Syngnathoides biaculeatus (alligator pipefish): 133502491
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Entry
133502491 CDS
T09681
Symbol
nfatc1
Name
(RefSeq) nuclear factor of activated T-cells, cytoplasmic 1
KO
K04446
nuclear factor of activated T-cells, cytoplasmic 1
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Pathway
sbia04010
MAPK signaling pathway
sbia04020
Calcium signaling pathway
sbia04148
Efferocytosis
sbia04218
Cellular senescence
sbia04310
Wnt signaling pathway
sbia04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
133502491 (nfatc1)
04310 Wnt signaling pathway
133502491 (nfatc1)
04020 Calcium signaling pathway
133502491 (nfatc1)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
133502491 (nfatc1)
09143 Cell growth and death
04218 Cellular senescence
133502491 (nfatc1)
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
133502491 (nfatc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sbia03000
]
133502491 (nfatc1)
Transcription factors [BR:
sbia03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) NF-AT
133502491 (nfatc1)
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Ortholog
Paralog
GFIT
Motif
Pfam:
RHD_dimer
RHD_DNA_bind
Motif
Other DBs
NCBI-GeneID:
133502491
NCBI-ProteinID:
XP_061679319
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All DBs
Position
1:15924308..15941845
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AA seq
751 aa
AA seq
DB search
MMKSAEEDSYGYTPNVSLALPLGNPCLAPQYLSLQSSPVISVSEAPVFDGRDDLSAAGYY
SVRPDGAPALESPRIEITAYGQFSEDAPEQDSLPAAKRVNSVVTLTLPSADGYRDPSCLS
PASSVSSRSCQSEASSYESSFSYNCDQSPQNSPWQSPSVSPKGSTLALPGSSPKRSPATS
PQTSVTDDPFVGRGCSRPNSPCGSKRKYSFNDGGVVHKHFQPSPNHSPGRSPQTSPRLSV
TEESWLPNTNQYTNSAILAAINALSTDGMADLGEGIPVKARRTGLELGPAVSLKLEPGNE
ELTSGVPCRDEHSSNRLPLKKEVYCGGFLDLPQHQYSWSKPKQYISPSLPALDWQLPSSS
GPYSLQIEVQPKSHHRAHYETEGSRGAVKALGGGHPIVQLRGYVSSEPLTLQLFIGTADE
RLLRPHAFYQVHRITGKTVSTPSHEALCNNNTKVLEIPLLPDNNMRAMIDCAGILKLRNS
DIELRKGETDIGRKNTRVRMVFRVHINQAGGRTVSLQAASNPIECSQRSAQELPLVDKQS
AESGAAPGGQTLKLDGHNFQADSKVVFVEKAQDGRHLWETEAKVDRDASKHNTLLVEIPP
YRNRRLSAPAHVNFYVCNGKRKRSQYQRFTYLPSAATGPLADSRPSPPAVAVPAIKTEPR
DDYDAPPKPFFPPQRRSAPRPDPPSSPSAGPKLHDLSHVSIIRETPGRFRPPSRGGISIK
EEPQELDQMYLDDVNEIIRNDLSSISVHSHA
NT seq
2256 nt
NT seq
+upstream
nt +downstream
nt
atgatgaaatcagccgaggaggactcgtacggctacacgcccaacgtcagcctcgccctc
ccgctgggcaacccttgcctggccccgcagtacctgagcctccagtccagcccggtcatc
tcggtctcggaggcccccgtcttcgacggccgggacgacctgagcgccgccggctactac
tctgtccgtcccgacggggcgcccgccctggagagccctcgcatcgagatcacggcctac
ggtcagttctccgaagacgccccggagcaggacagccttccggcggccaagcgcgtcaac
tccgtcgtcacgctgacgctccccagtgccgacggttaccgggaccccagctgcttgagt
cccgccagcagcgtctcgtcccgcagttgccagtcggaggcgtcctcctatgagtcaagc
ttctcgtacaactgcgaccaatcgccgcagaactccccgtggcagtctccctccgtctcc
cctaagggttccaccctggctctgccgggcagctccccgaaacgttcccccgccacgtca
ccccagacaagcgtgacggacgaccccttcgtcggtcggggatgctccaggcccaactcc
ccttgcggttcaaagaggaagtacagcttcaacgacggcggggtggtccacaagcacttc
cagccctcgcccaaccactcgcctggccggtcaccccaaacctcgccccgcctcagcgtc
accgaggagtcctggctgcccaacaccaaccagtacaccaactcggccatcttggcggcc
atcaacgccctgagcacggacggcatggccgacctgggcgaaggcatacccgtgaaggcc
cggcggaccggtctggagctgggccccgccgtcagcctcaagctggagcccggcaacgag
gagctgacatccggggtgccgtgtcgagacgagcactcctccaaccgccttccactgaag
aaggaggtgtactgcggagggttcctggacctgcctcagcaccagtactcctggtctaaa
cccaagcagtacatcagcccgtccctgccggccctcgactggcagctgccgtccagctcg
ggaccctacagcctgcagatcgaggtgcagcccaaatcccaccaccgggcccactatgag
accgaaggcagcaggggggcggtgaaggctctgggcggaggacaccccatcgtacagctc
cgcggctacgtgtccagcgagccgctgacgctgcagctgttcatcggcacggcggacgag
cggctgctgcggccgcacgccttctaccaggtgcaccgcatcaccggcaagaccgtgtcc
acgccgagccacgaggcgctctgcaacaacaacaccaaagtgctggagattccgctgctg
cccgacaacaacatgcgagccatgatcgactgcgcgggcatcctgaagctgcgcaactcc
gacatcgagctgcgcaagggcgagaccgacatcgggcgcaagaacacgcgggtgcggatg
gtgttccgggtgcacatcaaccaggccggcggcaggaccgtgtccctccaggccgcgtcc
aaccccatcgagtgctcccagaggtcggctcaggaactgcccctggtggacaagcagagc
gccgagagcggcgccgcccccggaggccagaccctgaaactggacgggcacaacttccag
gccgactccaaggtggtgtttgtggagaaggctcaagacggccgtcacctgtgggagacc
gaggccaaggtggaccgggacgcctccaagcataacacgctgctggtggaaatcccgccg
taccgcaaccggcgtctctcggcgccggcgcacgtcaacttttacgtctgcaacggcaaa
aggaaacggagtcagtaccagcgcttcacctacctgccgtccgcagccacgggcccgctc
gctgactcacgtccgtctcctcccgccgtcgcggttccggccatcaaaacggagccgcgg
gacgactacgacgccccccccaagcccttcttcccccctcagcggcgatcggccccccgg
cccgacccgccttcctccccgagcgccggccccaaattgcacgacttgtcccacgtctcc
atcatccgggagacccccggccgcttccgaccgccgtcccggggcggcatcagcatcaag
gaggaaccgcaggaactggaccagatgtaccttgatgacgtcaatgagatcatcaggaac
gacctgtccagcatctccgtccacagccacgcgtag
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