Syngnathoides biaculeatus (alligator pipefish): 133502502
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Entry
133502502 CDS
T09681
Name
(RefSeq) POU domain, class 2, transcription factor 2-like isoform X1
KO
K09364
POU domain transcription factor, class 2
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Pathway
sbia05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
133502502
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sbia03000
]
133502502
03021 Transcription machinery [BR:
sbia03021
]
133502502
Transcription factors [BR:
sbia03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
133502502
Transcription machinery [BR:
sbia03021
]
Eukaryotic type
RNA polymerase III system
Other transcription-related factors
Octamer transcription factors
133502502
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pou
Homeodomain
HTH_31
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
133502502
NCBI-ProteinID:
XP_061679355
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All DBs
Position
1:16166942..16219902
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AA seq
711 aa
AA seq
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MFVPLPLPFVFQRTASDFSAWRLKTSPAPRASPEIRMSKAEEEKAGSDFPGDGSDSESSS
PDGQFPSTEGGPFGLSPATAGKAEESCEMSRSDAPPPPSSQQQAQLMLAGSQLAGLAALL
PAQQQLLLQQAQAQLLAAAVQHQQNQTAQQQLHFQQSAKQDVTVQAPPPPPPPPPPQLAL
SQPIQLTAQDIQQLLQLQQLVLMPGHPLPSPAQFLLSQPPPRAQQQQQQAFSTQNLIQLP
QQSSAGALTTPSPRPAPRVQREKSSEFSGSVGASVAPTGGGAAASAVGSSSASGGTTVAS
LNSALTPGGHVGHLGEEPSDLEELEQFARTFKQRRIKLGFTQGDVGVAMGKLYGNDFSQT
TISRFEALNLSFKNMCKLKPLLEKWLGDAESMAVDSMLPSPSSISSPLLGLEGLAGRRRK
KRTSIETNVRVALERNFSANQKPTSEEILLMAEQLNMEKEVIRVWFCNRRQKEKRINPSS
SGTPPPPPGRVSPAVTHKAPSYGPHVISSPGVPQGGGGGGGLSTTAAALSPSPVSSVAAG
STSSSLTPPPHSTASPAPPALGAHGLNAGNTMMGVSTGMNQAFMGSSPLATMQVLAASGG
QLSIMETGAGRMILGAGPGGVPPSLRSSLFLNRPALLPMVTGSISMATASPPAAGPAGGA
FRSAFARSPPAGALRLPGPPSCPDDSPCSSPASFCSFGEASPPPLGGATAE
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atgtttgtccccctgccgctgcccttcgtctttcagagaaccgcgtccgacttcagcgcc
tggagactcaagacgtcgccggctccgcgggccagccccgagatcaggatgtccaaagca
gaggaggagaaggccgggtcggactttcccggcgacggctcagactccgagagtagcagt
cccgacggccagtttccgtcgacggagggcggcccgttcggcctctcgcccgcaacagcc
ggcaaggcggaggagagttgcgagatgagccgcagcgacgcgccgccgccgccgtcttcg
cagcagcaggcgcaactgatgctggccgggagccagttggcagggctggcggcgctcctg
ccggcccagcagcagcttctcctccaacaggcgcaggctcagctcttggccgccgccgtc
cagcaccagcagaaccaaacggctcagcagcagttgcactttcagcagagcgccaagcag
gacgtgaccgttcaagctcctcctcctcctcctcctccgccaccgcctcagctggccctc
tcgcagccaatccagctcacggcgcaggacatccagcagctgctccagctccagcagctg
gttctcatgccgggccacccgctcccgtccccggcccagttcctcctgtcgcagccgccc
ccccgcgctcagcaacaacagcaacaagctttctccacccaaaatctaatccagctacct
cagcaaagctcggcgggcgcgctgacaacgccgtcgccccgcccggccccccgtgtgcag
agagagaagagcagcgagttcagcgggagcgtcggtgcctcggtggcacccacgggcggc
ggcgcggcggcctcggcggtgggctcctcgtccgcctcgggcggcacgacggtggcttcc
ttgaactccgcgttgaccccggggggtcacgtcgggcacctgggagaggagcccagcgat
ctggaggagctggagcagtttgctcgcacgttcaagcagcgacgcatcaagctgggattc
acacagggcgacgtgggcgtcgccatgggcaaactgtacggcaacgacttcagccaaacg
accatctcgcgcttcgaggccctcaacctgagcttcaagaacatgtgcaagctcaagccc
ctgctggagaagtggctcggggacgcggagagcatggcagttgacagcatgctgcccagc
ccctcgtccatctcatccccgctgctgggcttggagggtctggcgggccggcgccggaag
aagcgcaccagcatcgagaccaacgtgcgcgtggcgctcgaacgcaactttagcgcaaac
cagaagcccacctcggaggagatcctgctgatggccgagcagctcaacatggagaaggag
gtgatccgagtgtggttctgcaaccggcggcagaaggagaagcggattaacccgagcagc
agcggcacgccgccgccgccgcccggccgggtctcgccggccgtcacgcacaaagccccc
tcctacggcccccatgtgatttccagtccgggtgtgccccagggcggcggcggcggcggc
ggcctcagcacaacagccgccgctctgtcgccgtcgcccgtcagctccgtggcagcgggg
tccacgtcctcttctttaactccgccccctcacagcacagctagccccgcccctccggct
ctgggggctcacgggctcaacgccgggaacacgatgatgggagtaagcacaggaatgaac
caagcgttcatgggcagcagtccgctggctaccatgcaagtgctggcagcgagcggcggt
cagctgtcaatcatggagacgggagcgggtcgcatgattctgggcgccgggcccggcggg
gtgccgccctcgctgcgctcctcgctcttcctcaaccgcccggcgcttctgcccatggtg
acgggctccatctccatggcgacagcgtccccgcccgccgcggggccggctgggggcgcc
ttccgttcggctttcgcccgctctcctcccgccggcgccctccgcctcccgggccccccc
tcctgccccgacgactccccgtgctccagccccgcctctttctgttctttcggcgaggcc
tcgccgccgcccctggggggggccacggccgagtga
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