Syngnathoides biaculeatus (alligator pipefish): 133502505
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Entry
133502505 CDS
T09681
Name
(RefSeq) exosome complex component MTR3-like
KO
K12587
exosome complex component MTR3
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Pathway
sbia03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
133502505
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sbia03019
]
133502505
Messenger RNA biogenesis [BR:
sbia03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
133502505
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
133502505
NCBI-ProteinID:
XP_061679357
LinkDB
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Position
6:8806..11624
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AA seq
274 aa
AA seq
DB search
MPVDTRRIRGPEVSLSPSLFACKPAPGLPTHGPRADGRQRDQVDVRPVFVRCGLVSQAKG
SAYMEAGGTKLMCCVYGPRETDRKDETDMKCGRLTTDMRFAPFSYQERGAWIQGSQDKDF
SLMLHESLQPALCLHKYPRSQIEVNVMVLENSGSVLAHAVTCASLALADAGIEMYDLVLG
CAVRQDGASYVLDPTYAEENGSGSASGDNQGRLTLAFLPSLNQISGLQSDGEMTEEALSA
GVRTCIEGCYKIYPVIQQALAKAVRRAAPPPSES
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atgcctgttgacaccagacgaatacgtggtccagaggtttccctaagtccgtctctgttc
gcgtgcaagccggcgccaggcttgccaacgcacggtcccagagcggacggccggcaacgg
gaccaagtggacgtccggcccgttttcgtcaggtgcgggctggtgagccaggccaagggc
tctgcgtacatggaggccggaggtaccaagttgatgtgctgcgtttatggtcccagagaa
acggatcgtaaagatgaaaccgatatgaagtgtggaaggttgacgacagacatgcggttt
gctccattctcgtaccaagaaagaggcgcctggattcaagggagtcaggacaaggacttc
tccttgatgctgcacgaaagtctgcagcccgctttgtgccttcacaaatacccccgctca
cagatcgaggtcaacgtgatggttctcgaaaacagcggctcagttctggcacacgccgtc
acctgcgcgtccctcgctctcgcagacgcaggtattgaaatgtacgacctggtcctcggc
tgtgccgtccgacaggatggggcttcttatgtgctcgacccgacgtatgcggaggaaaat
ggcagcggctcagcgagtggcgacaatcagggtcgactcacgctcgcgttcctccccagc
ttgaatcagatttctgggctgcagtctgacggggaaatgactgaagaggctttgtctgct
ggggtgcgcacgtgtattgagggctgctataagatatatccagtcatccaacaagctctg
gcgaaggcagttcggagggcagcccccccaccatcagagagctga
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