Syngnathoides biaculeatus (alligator pipefish): 133502519
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Entry
133502519 CDS
T09681
Symbol
fan1
Name
(RefSeq) fanconi-associated nuclease 1
KO
K15363
fanconi-associated nuclease 1 [EC:3.1.21.-
3.1.4.1
]
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Pathway
sbia03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
133502519 (fan1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sbia03400
]
133502519 (fan1)
Enzymes [BR:
sbia01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.1 phosphodiesterase I
133502519 (fan1)
DNA repair and recombination proteins [BR:
sbia03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
Other FA pathway factors
133502519 (fan1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAN1_TPR
VRR_NUC
Fan1_SAP
FAN1_HTH
Motif
Other DBs
NCBI-GeneID:
133502519
NCBI-ProteinID:
XP_061679381
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All DBs
Position
6:1965247..1973183
Genome browser
AA seq
966 aa
AA seq
DB search
MADKGDKHKPRRDLSSKNKKKGSALAVNKTLITSFFSNPPPPKLSCPLCGQMVLRFGINE
HIDLQCKNFERGDHVASSENKTAVSPSRNSPKSSQRDPEQEDETRTSPYFKSRTSPNPTR
EISNKIVVRTLNLGSLSNKLSRTCQTTIDTTHSNVKDGCSDLKDSLDDVSNSQKENIDSQ
ASGSNGHSMRESELTTTDVDPSITATSLENDPKQETGSNALLSSSSKQVKRKKETPDTGR
VSSIIKKQKHGGTSSVETFSGKNAQEKVKLKTEVLSTIDHEPLSSSDKSSHTSSDLQVDS
VAEKSIRNQTDDTSPPQRLPYYLRNFQTVLQAVLENEDDRALFDQDDLMLVQTFEKLSLM
GQKLYVRLFQRKLKWLQVDKLNYEEISSDLGLVTRELVQGGLLETEKDLSDVEEVLDLLP
APELKALAKTFHLGNCGTQKQQLVDGLLRLSKQKSLFSLSQPQNNIRAVILKRAKQLAGS
CVRLHRGPRAVFSRILLLFSLTDTMDEEETAAGGQSQLYTILLVNTGRLAFPDYVVQRVA
KVFQDRDDLIRYEASMRALQEVTLTMQAGHWEEAMDLYTKAKNEWEDLKMSYDLSHQEEL
PVFLRSFTTGWAYTRILSRGVEILQRLRRYEEAVDELQSLLLQDVYCPDSRGRWWDRLAL
NLQQHLKKPEEAICAIRDGLSDPLVRTGHKLSLYQRAFRMRESASFKKYHLLLSELPTFD
VQDVRHVTIRGQLFPHEGGKGKSRFLVPSNVDDCTDGTVICSVEDLSLAHYRQQGFDQGI
HGEGSTFSTLFALLLWDIIFMDGIPDVFRTLYQAYPLDFYTDCFYENRREAVDSRVDLLS
KASVETLHAMMEDIWNSQEGKVCSCANWELFSSLRQAQSLVSCMGGAFLAGVIIRMAKDF
RHCRGGLPDLVVWNTSNKIYKLVEVKGPNDRLSQKQQIWLDELQKLGADVEVCHVVATGA
KGSRVE
NT seq
2901 nt
NT seq
+upstream
nt +downstream
nt
atggccgacaaaggagacaaacacaaacccaggcgggatttgtcctccaagaacaaaaag
aaaggaagcgctctcgctgtcaacaaaactctcatcacgtcgttcttcagcaacccgccg
ccgccaaaactgtcttgcccgctttgcggtcagatggttctcagatttggcatcaacgag
cacattgatttgcagtgcaagaactttgagagaggagaccatgttgcctcatcagaaaat
aagactgccgtgtcacccagcagaaactcccccaagtcctcccagcgagatccggagcag
gaggacgaaaccaggacaagtccttatttcaagtcgagaacctctccgaacccgactcgg
gaaataagcaacaagattgtagtcagaacactcaacctaggaagtctctccaataagtta
tctagaacttgccaaacgacaattgataccacacactcaaatgttaaagatggatgttct
gatcttaaagactctttggatgatgtgagcaactcacagaaagaaaatattgacagccag
gcttcgggaagcaacggacactcaatgagagaaagcgagttgacaacaaccgatgttgac
ccaagtataacagcaacaagtttggaaaatgatccaaaacaagagacagggtcaaatgcg
ttactctcctcttcctccaaacaagttaagcgaaagaaggagacacctgacactggtagg
gtgtctagtataataaagaaacaaaaacacgggggaaccagctcggtggaaacattttct
gggaaaaatgcacaagaaaaagtaaaactcaagactgaggtgctctctaccattgatcat
gagcccctttcaagctcagacaagtcctctcatactagcagcgatttacaggtggatagt
gtggctgagaaaagcatcaggaaccagacagacgacacatcacccccacaaaggctgccc
tattacctacgcaatttccagaccgttcttcaggccgtgctggagaacgaagacgacaga
gccctgtttgatcaggatgacctgatgctggtgcaaacctttgagaagctctcactcatg
ggacagaagttgtacgtgagactgtttcagcggaaactgaagtggcttcaagtggataaa
ctgaattatgaggaaatatccagtgatttgggacttgttactcgggagctggtccagggt
ggtcttctggagacagagaaagacctaagcgatgtagaagaagttctagatctcttgcct
gcccctgagctcaaagcactggcaaagacatttcatctgggcaattgtggaactcaaaaa
cagcagctcgtcgatgggcttctccggctgagcaagcagaagtcactcttctcgctgagc
cagcctcaaaacaacatcagggctgtcatcttgaaaagagcaaagcagcttgcaggttcc
tgtgtgcgtctgcaccgcggtcctcgggctgtcttctctcgcatccttctgctcttctct
ctgaccgacactatggatgaggaggagacagcagcaggtggacaaagccagctttatacc
atcctgctggtcaacacggggcgcctggccttcccagattacgtagtgcagcgcgtggca
aaggtcttccaggacagagacgacctcattagatatgaagcatccatgcgagcattgcag
gaggtgaccttgacgatgcaggcaggtcactgggaagaggctatggacctttatactaaa
gccaagaatgagtgggaggacctaaaaatgagctacgatctcagtcatcaagaggagctc
ccagtgttcctgcgcagcttcaccacaggatgggcttacactcgtatattatcaagaggt
gtggagatcttacagagactgcgtcgatatgaggaggctgtcgatgagttgcagtccttg
cttctccaggatgtgtactgcccagacagtagagggcgctggtgggacagactggcactg
aaccttcaacaacacctcaaaaaacctgaagaagccatctgtgctatcagagacggtttg
tctgaccccttagtgcgaacaggacataagttgtccctctaccagagagcttttcggatg
agagagtctgccagcttcaagaagtaccatctgctgctcagcgagctccccactttcgat
gtccaggatgtcagacatgtgaccatccgaggacagctttttccccatgaagggggcaaa
gggaaatcacggtttctagtaccgtcaaatgtggacgattgtactgatggcaccgtaata
tgctccgtggaagatctgtctttagctcattaccgccagcaaggctttgaccaaggaatc
catggagaaggatcaacattctcaacactattcgcccttctgttgtgggacatcattttt
atggatggaataccagatgttttccgaactttgtatcaggcatatcccctggatttttac
actgactgtttctatgagaaccgacgagaggcagtggattcccgtgtagatttacttagt
aaagcttcggtagaaaccttgcacgccatgatggaggatatttggaattcccaagagggc
aaagtgtgttcttgtgccaactgggagctattctcttcacttagacaagcccagtctctt
gtgtcatgcatgggcggagccttcttagcaggcgtaataatacggatggcgaaagacttc
agacactgtcgtggaggtttgccggaccttgttgtgtggaacacatccaataaaatctac
aagctggtggaggtgaaggggccgaatgaccgtctgtcccagaagcaacagatctggttg
gatgagctccaaaaactgggtgctgacgtggaggtgtgtcatgtggtggccactggagcc
aaaggatctcgtgtggaataa
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