Syngnathoides biaculeatus (alligator pipefish): 133502520
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Entry
133502520 CDS
T09681
Symbol
znrf1
Name
(RefSeq) E3 ubiquitin-protein ligase znrf1 isoform X1
KO
K10694
E3 ubiquitin-protein ligase ZNRF1/2 [EC:
2.3.2.27
]
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sbia04121
]
133502520 (znrf1)
Enzymes [BR:
sbia01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
133502520 (znrf1)
Ubiquitin system [BR:
sbia04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
133502520 (znrf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4
zf-rbx1
zf-RING_16
zf-Vps39_C
SLX1_C
Prok-RING_1
Motif
Other DBs
NCBI-GeneID:
133502520
NCBI-ProteinID:
XP_061679382
LinkDB
All DBs
Position
6:complement(6238304..6305293)
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AA seq
227 aa
AA seq
DB search
MGGKQSTAGRTRAAFTGVSTDDSAVPPSAHFGHYRSSGTMGLRSRSASSLAAIGIEQSPN
VPFGFYTPRDTDSDPAGGGSGGSPAASHRTGYQDSRSGRPHADGVLYLGSRGSLADSLPL
HIAPRWFSAHSGKRALRAARCRFKCPVCSKAVASSEMEVHFIMCLSKPRLSYNDDVLVRD
AGECVICLEELQQGDTIARLPCLCIYHKSCIDSWFEINRSCPEHPSD
NT seq
684 nt
NT seq
+upstream
nt +downstream
nt
atgggggggaagcagagcacggcggggcggacccgggctgcttttaccggcgtttcgacg
gatgacagcgcggtgccgccgtcggcccacttcggccactaccgctcgagcggcaccatg
ggcctgcgcagccgctcggcgagctctttggccgcgattggcatcgagcaaagtcccaac
gttcccttcggattttacacccccagagacacggactctgatccagctggaggtgggtca
gggggcagtcccgctgcttctcaccgaaccggctatcaggacagcagaagcggacggcct
cacgcggatggggttctctatcttggctcccgggggtcgctggctgactccttgcccctg
cacatcgctccccgctggtttagcgctcacagcggtaagcgcgctctgagagccgctcgt
tgtcgattcaagtgtcctgtctgctccaaagctgtggcgtccagtgaaatggaagttcac
ttcatcatgtgtttgagcaagcctcgactctcatacaatgatgatgtgttggtgagggat
gctggcgaatgtgtgatctgtcttgaggaactgcaacaaggagacaccatagccagactg
ccgtgcctctgtatctaccacaaaagctgtatagactcgtggttcgagatcaaccggtcc
tgccccgaacacccttctgactga
DBGET
integrated database retrieval system
