Syngnathoides biaculeatus (alligator pipefish): 133502576
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Entry
133502576 CDS
T09681
Symbol
chd2
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 2 isoform X1
KO
K20091
chromodomain-helicase-DNA-binding protein 2 [EC:5.6.2.-]
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sbia03036
]
133502576 (chd2)
Chromosome and associated proteins [BR:
sbia03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
133502576 (chd2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_Hrp3
CDH1_2_SANT_HL1
Helicase_C
CHD1-like_C
Chromo
ResIII
HDA2-3
Motif
Other DBs
NCBI-GeneID:
133502576
NCBI-ProteinID:
XP_061679520
LinkDB
All DBs
Position
6:23248496..23289622
Genome browser
AA seq
1821 aa
AA seq
DB search
MKNRNKKQGDEGSTQSNASSNSATEESNRSGSESGSQSESEHGSERRQPRRSESNSSSGS
ESRSGSESESAESKRQASGDLKDKPVKKKERLADVKKVTEPPSTLYSTSRMLRVVILFQM
WEEHPDVYGVRRSNRSRQEPSRLNIGAGGSSDSESESPKRKSSRVKKDIWNDDDDDDDSN
DDEEEASSSTDSEQEEKKVRSRRLPARRPQTKSSNKKLSQKTRKSRKQESSPEEDDDDDE
EDEDDEDEDDDDDDTPKRQTRRRGATKVKSYKEDQHDFETDSDDLIEMTGDACEEQQDDD
SETIEKVMDTRIGKKGATGASTTMYAVEENGDPCEGFDPNNDEGETQYLVKWKGWSYIHN
TWESMDSLTQQKVKGLKKLDNFKKKNEELNAWLKKASPEDVEFHNCQLELIADLNKQFQF
VERVIATKTGKTHGSSDFPSHSHKTSSNEPEYLCKWMGLPYSECSWEDGALVMKKFQHCI
DSFLSRNSSKTVPSKDCKVLKQRPRFVALKKQPTYIGDENLELRDYQLAGLNWLAHSWCR
CNSVILADEMGLGKTIQTISFLSYLFHQHQLYGPFLVVVPLSTLTSWQREFDTWAPDMNV
VVYLGDVMSRKTIRDYEWVNHQTKRIRFNALLTTYEILLKDKGVLGNINWAFLGVDEAHR
LKNDDSLLYKTLMEFRSNHRLLITGTPLQNSLKELWSLLHFLMPDKFDSWEDFEDDHGKG
RENGYQSLHKVLEPFLLRRVKKDVEKSLPAKVEQILRVDMSAQQKQFYKWILTRNYKALS
KGTRGSSSGFLNIVMELKKCCNHGFLIKQPDEGEPESQEEHLQALVRGSGKLVLLDKLLT
RLRERGNRVLIFSQMVRMLDILAEYLAKKRYPFQRLDGSIKGEIRKQALDHFNAEGSEDF
CFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGTV
EEDIIERAKKKMVLDHLVIQRMDTTGRTVLDSNSGNTNSNPFNKEELTAILKFGAEELFK
EAEGEESEPQEMDIDEILRLAETRESDQGQSATDELLSQFKVANFSSMEESAPDLEEKPS
REWDDIIPEEQRRKVEEEEEKQREMDLFMLPRSRSSNKRAQANDSDSDVGSKLKQHSSGS
DSETDDSDEDKKPKKRGRPRARKNNVEGFNDAEIRRFIKAYKKFAAPLERLEAIARDSEL
VDKSIADLKRLGELIHTSCMAAVQEHEENLKENPIEAKGPGKRRGINIKISGVQVNAKSI
IQHEEEFEPLHKAVPSDPAERNTFKLTCRVKVAHFDVDWNVEDDVQLLLGIYEHGFSNWD
LIKTDPDLKLGEKILPDDPGKKPQAKQLQARAEYLLKLLKKEQDNADISKTADDVKVKKR
KPRVKKEKIVKDEQGNDISSPRLSDNPSEEGELKEEGAEKSPTKKRQKKDNKENKEKQGT
PKKEKEGDKEKKANKAKKEKGKGAKPRKSQGPVHITAGSDPVPIEGKEDDELDQETFSIC
KERMRPVKKALKQLDKPDEGLSDQDQLQHTRTCLLKIGDRITECLKAYSDPEHVKIWRRN
LWIFVSKFTEFGARKLHKLYKMAQKKRSHEEEKEHKKKDEPPSRGKSFRADASASGRDSA
GPQSAPSHSMQSAPHGHHRDYNKRHFPNDDRGDWQRKYNHPGNSNQSWQGERHHPYDGHR
YKDHYGDRHAHGDSYRSSGGYRNNSSPRKRPYDLYGNDRDHRAHRPYYDRHQDPKRRRPD
DFHSNYHHQGRDGPSQDFRRMPDHRSGAPPSQDHYGRPFYPDKPPPLDPRSQQCQKSPHD
SLSSPPDHNAPAESAWNNRKS
NT seq
5466 nt
NT seq
+upstream
nt +downstream
nt
atgaagaacagaaataaaaagcaaggggatgaaggatccactcaaagcaatgcatccagc
aattcagctacagaagagtccaaccgctctgggtcagagtcggggagtcagtccgagagc
gagcatggcagcgagagacgacagccccgccgctcagagtccaacagctcgtccgggtcc
gagagtcggtcggggagtgaaagtgagtctgcggagtccaagaggcaggctagcggcgac
ctcaaggacaagccggttaagaagaaggagcgcctggctgatgttaagaaggtaacagaa
ccgccttcaactttgtactccacttccaggatgttacgggtcgttatcttatttcagatg
tgggaggagcatccagacgtctacggagtcagaaggtccaaccgcagtagacaggaacca
tctcgtttgaacatcggcgctgggggtagcagtgactcagaaagtgaaagtccaaaaaga
aaaagctctcgtgtcaagaaggatatctggaatgatgatgatgatgatgatgactcaaat
gatgacgaggaggaagcttccagcagtacagacagtgagcaggaagagaaaaaagttaga
tccagaagacttcctgctagaagacctcagacgaaatcgtcaaacaaaaaactttcccaa
aaaacacggaaatcaaggaaacaagaatcctcacctgaggaagacgatgacgacgacgag
gaggatgaggatgacgaggatgaggatgacgacgacgacgatactccaaaaagacaaact
cgtcgaagaggggcgaccaaagtcaaaagctataaagaagaccaacacgactttgaaaca
gactccgacgacctgattgagatgacgggcgacgcatgcgaggaacagcaggatgacgac
agcgagaccattgaaaaagtcatggacaccaggatcggcaaaaaaggagccacaggtgct
tccacaaccatgtacgccgtggaggagaacggtgacccgtgcgaaggctttgacccgaac
aacgacgagggggaaacccagtatctggtcaagtggaagggctggtcttacatccacaac
acgtgggagagcatggactcgctaacacagcagaaagtaaagggtttgaagaaactggac
aacttcaagaagaaaaatgaagagctcaatgcatggttgaagaaggcatctcctgaggat
gtggagtttcacaactgccagctggagctcattgcagacttgaacaagcagtttcagttt
gtggagcgtgtaatcgcaaccaaaacaggaaaaacgcacggatcttccgacttcccatct
cacagtcacaagacgtcatcaaatgagcccgagtacctgtgcaagtggatgggcctcccg
tactcggagtgcagttgggaagacggggcgctggttatgaagaagttccagcactgcata
gacagcttcttgagccggaactccagcaaaactgtcccctccaaagactgcaaggtgttg
aaacaaaggccgagatttgttgctctgaaaaagcagcctacgtacattggagatgagaac
ctcgaactgagagactatcagctggccgggctcaactggctcgctcactcctggtgcagg
tgcaacagcgtcatcctggcagacgagatgggtctgggaaagaccatccaaaccatctct
ttcctctcctacctgttccaccagcatcagctgtatgggcccttcttagtggtggtgccc
ctgtccacgctcacgtcctggcagagagagtttgacacctgggcccccgacatgaacgta
gtggtttacctcggtgacgtcatgagccgcaaaacgatccgtgactacgagtgggtgaat
caccaaactaaaagaatccgttttaatgcactattaactacttatgaaattctcctgaaa
gacaagggagtcctgggcaacatcaactgggcgttcctcggtgtggatgaggctcaccgg
ttgaagaatgacgattccctcttgtacaagacattaatggagttcaggtcgaatcacagg
ctccttattaccggcactccgctgcagaattctctcaaagaactgtggtcactgctgcac
tttctcatgcctgacaagtttgactcgtgggaggattttgaggacgaccacggcaaagga
agagaaaacggctaccagagtctccacaaagtcctcgaacccttcctgctccgtcgtgtc
aaaaaggatgtggagaaatcacttcctgccaaagtggagcagattctccgtgttgacatg
agtgcacagcagaaacaattttacaagtggattttaacacggaattacaaagcgctctcc
aaaggcactcgaggcagctcctcgggcttcctgaacattgttatggagcttaaaaagtgt
tgcaaccacggcttcctcatcaagcagcccgacgagggggagcccgaatctcaagaggaa
cacctgcaggctctcgtgcgcggcagcgggaagctagtgctgctggacaagctgctcacc
cggctcagggagcgaggcaacagagtgctgatcttctcgcagatggtcaggatgttggac
atcctggctgaatacctcgccaagaaacgttacccattccagcgattggatggctccatc
aagggagaaattcgaaagcaagcactggaccactttaatgccgaaggctcggaggacttc
tgctttctcttgtccacgagagctggaggcttaggaataaacttggcctcggccgacacc
gtggtcatcttcgactcggattggaaccctcagaatgacctgcaggctcaagctagggct
cacaggattggccagaagaaacaggtgaatatatatcgactggtcaccaagggaacagtc
gaggaagacatcatcgagagggcaaagaagaagatggttttggaccatctggtcatccag
cgaatggacaccaccggtcgaactgtactggatagcaactcgggcaacaccaattcaaac
ccatttaacaaggaagagctcactgctatcctcaagtttggtgcagaagaactctttaaa
gaagcagaaggagaagagtctgaacctcaggaaatggacattgacgagatcctgaggttg
gcagaaacgagagaaagtgaccagggccaaagtgcaactgatgaacttctgtctcagttt
aaggtggccaatttttccagcatggaggagagtgcgcctgacctcgaggagaagccttct
cgggaatgggacgacatcatccccgaggagcaacgacgtaaagtcgaagaggaggaggag
aagcagcgggaaatggatctcttcatgttgcccagaagcagaagttccaacaagcgggct
caggccaatgacagcgacagcgacgtgggctccaagctcaagcaacactcctcgggctcc
gacagcgagacggacgacagcgacgaagacaagaagccaaagaagagaggccggcctcga
gcccgcaagaacaacgtggagggtttcaacgatgccgaaatacggagattcattaaggct
tacaagaagtttgcagctccacttgaaaggctggaagccatagcgcgggactctgagctg
gtcgacaagtcgatcgcagacctgaagagactgggcgaactcattcacaccagttgtatg
gctgcagtgcaagaacacgaggaaaacctgaaagagaacccaattgaagcgaaaggtccc
ggcaaacggcgaggaatcaacatcaagatctcgggcgtgcaggtcaacgcaaagtccatc
atacagcacgaggaggagtttgagccgttacacaaagccgtgccgtccgatccggccgag
aggaatactttcaagctcacttgcagagtcaaggtcgcccacttcgacgtggactggaat
gtggaagatgacgttcagcttttactgggaatttacgagcacggattcagcaactgggat
ctcatcaagaccgatcccgacctcaagctgggtgaaaagatcctccctgatgatccaggc
aaaaagcctcaggccaaacagctgcaggcgagagccgagtatctactcaagctgctcaaa
aaggaacaagacaacgcagacatatcaaaaactgcggacgacgtcaaagtgaagaaaagg
aaacctcgggtgaagaaggagaagatagtcaaggatgagcagggcaatgacatctcgtcc
ccgcgcttgtccgacaatccgtcagaagagggtgagctcaaggaggaaggagccgaaaag
tcccccaccaagaagcgacagaagaaggacaacaaggagaacaaagagaagcaaggaact
ccgaagaaggagaaggaaggagacaaagagaagaaggcgaacaaggccaaaaaagagaag
ggaaaaggagccaaaccccggaaaagtcaaggacccgttcacatcacggcaggctccgac
cccgttcccatcgaaggaaaggaagacgacgaactggaccaggagactttcagtatttgc
aaggagcgcatgaggccggtcaagaaggcgctgaagcagctggataaaccggacgagggt
ttgtcggaccaggaccagctccagcacacgcgcacgtgcctgctgaagatcggagaccgg
atcaccgagtgccttaaagcctacagcgaccccgagcatgtgaaaatatggcgacgaaat
ctctggatttttgtgtccaagtttacggaatttggcgcccggaagttgcacaagctttac
aaaatggcccagaagaaacgctcacacgaggaagagaaggagcacaagaagaaggacgag
ccccccagtcgaggaaaatctttccgggcggacgcttcggcgtccggtcgagactccgcg
ggtccgcagtctgctccctcacactccatgcagtcggctcctcacggacaccaccgggat
tacaacaaacggcactttcccaacgacgaccggggggactggcagcgcaagtacaaccac
ccgggcaacagcaaccagtcgtggcagggcgagcgtcaccacccgtacgacggccaccgc
tacaaggaccactacggcgaccggcacgcccacggcgactcgtaccgcagctcgggcggc
taccgcaacaacagctcgccgcgcaagaggccctacgacctgtacggcaacgaccgggac
caccgggcgcaccgcccctactacgacaggcaccaggaccccaaaagaaggcgcccggac
gacttccactccaattaccaccaccagggacgcgacggcccctctcaggacttccgccgg
atgccggaccaccggtccggggcgccgccgagccaagaccactacggcagacccttctac
ccggacaaacccccgccgctggacccgcgctcccagcagtgtcagaaatcgccgcacgac
tccctgtcgtcgccgccggaccacaacgccccggccgaaagcgcctggaacaacaggaag
tcctaa
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integrated database retrieval system
