Syngnathoides biaculeatus (alligator pipefish): 133502603
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Entry
133502603 CDS
T09681
Symbol
lamb1a
Name
(RefSeq) laminin subunit beta-1a isoform X1
KO
K05636
laminin, beta 1
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Pathway
sbia04510
Focal adhesion
sbia04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
133502603 (lamb1a)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
133502603 (lamb1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
LAMININ_IV_B
Laminin_N
EGF_LMN_ATRN
LAMB1
F5_F8_type_C
DUF3887
POC1
Motif
Other DBs
NCBI-GeneID:
133502603
NCBI-ProteinID:
XP_061679580
LinkDB
All DBs
Position
6:complement(5015497..5120000)
Genome browser
AA seq
1792 aa
AA seq
DB search
MLRVELVMLLGLQVFTQVRPLVDQGKDQISLPELTDVCTEGSCYPATGDLLIGRAHQLSA
TSTCGLNHPEPFCIVSHLQEEKKCFMCDSASPYSEASNQAGSHLIENVVTTFAPNRLKTW
WQSENGMENVTIQLNLEAEFHFTHLIMTFKTFRPAAMLIERSADFGKTWNVYRYFAYDCE
SSFSDVSAGPMVKVDDVICDSRYSDIEPSTEGEVIFRVLDPAFRINDPYGPRIQNMLKIT
NLRVKFTKLHTLGDNLLDTRMEIKEKYYYAIYDMVVRGNCFCYGHASECVPVWATGPVRE
GMVHGHCMCNHNTKGLNCEQCQEFYHDLPWKPAEGRNTNACKKCNCNHHSDSCHFDMAIY
MASGNRSGGVCDHCQHNTAGYHCERCKPFYFQNPEKDVRDPNICQSCSCDTLGSLNGGLC
DGRTDIRVGLISGQCRCKINVEGERCDSCKQGYYGLTDIPEGCKACTCSFLGTFPGQNPC
DSETGNCFCKRLVTGTDCDHCVSEHWGLSNDMDGCRPCDCNLGGAINNQCDQLTGQCVCR
DHVFGRRCDQLESGFYFIALDHYTYEAEDAKLGPGGMVVSRSDPQDHSPTWTGLGLVNVS
EGAFLEFTVDNIPYSMEYDILIRYEPQLPDQWEEVLMTVIRLKPIRADSRCINTVPDDDH
QMISLHPGSRHVALPRPVCFESGLNYTIRLNLPLYSGLRDVQSPYTLIDSIVLMPHCKNL
DLFTTLQGGESGENNRWETFKHYRCLEKSQSVIKTPMTDVCQNLLFRVSALLHQGAKECQ
CDPQGSLSTVCNVSGGQCECRPHVVGRNCDRCAPATFQFGPSGCKECNCDPQGSQSPLCN
QVTGQCECVSGVYGHHCHRCLPGYWGFPTCRPCSCNGHTEDCDAQSGQCLNCRDYTTGQN
CDRCLDGYYGNLTLGSGDHCHPCKCPDGPGSLRQFAGSCFRDDSQKAICVCNTGYMGARC
NECFPGYYGNPHVIGGSCQPCQCNNNIDLLDPQSCNAQTGECLRCLYNSVGYSCENCMMG
YYGNALLQDCRKCVCNEVGSDGASCPSPGDCHCDLVSGQCHCLPNVIGQHCDHCAPDTWN
MASGKGCQACDCDTKHSYGTFCNEISGQCSCAPGFGGRTCSECRALFWGDPKVECYECDC
QSYGITQLQCNKDNGHCICIEGVSGPRCDTCAHGFSGTFPNCHRCHQCFAEWDAVIGQLT
NQTHRLANKVNAIKTSGVGPYRKSIESLEKSASDIQAILHQNPASQPLSEIEQLLQEASD
LMGSLSQSLNYTENLRFSVQEEDSSMEAKLKLLMADAQKLEQTVEDILYQVELIKYSDIR
GAVNSVTKYFLQSQEAEERAIASTTDSNSPLENSANLRKLTENKMNLTKDEFLRRHIEHV
QKLDDLAGQIQTLDLKELSHKTCRNPAGQDSCSSSCGELDCVNTQGDLICRGEDCDGVIS
KVHSSLQKAFDSEHEILNAMDEVDQFANMVSEAKQKANQAKMSAYNVFMKTNRTKQNFDQ
SNEELKTLIREIHGFLTEEGADLESIQKVADEVLAMQMPTTREQLQNFTDEIREKVGELG
NVETILQQSTDNIERATILLEQARQVSQEAADAKDSSEIVKEALEEAQRAQTAASSAIQQ
ATDDIKNTNKLLLSVKSDTSDGEIKLNNATRRLQQLNEEVSLLRDKTLNGTLISELTIQD
ATSIRQIVKEAKKDIDSELKDKYSTVAHLIDLKGNAVANANKRAELLQQEAKELLLQASD
KLQILKELEKSFEVNHHALEVKAEQLVDLENSVKELLQEISHKVTVYNTCLF
NT seq
5379 nt
NT seq
+upstream
nt +downstream
nt
atgttgcgtgttgaacttgtgatgcttcttggtcttcaggtgttcactcaagttcgacct
ctggtggaccaaggcaaggatcagatcagtctacctgagctcactgatgtctgcactgag
ggcagctgttacccagcaacaggcgatcttcttattgggcgagcacaccagctctcagca
acctcgacctgtggactaaaccatcctgaacctttctgcattgtcagccatctgcaggag
gaaaaaaaatgtttcatgtgtgactcagcatccccctacagtgaagcatccaatcaggcg
ggcagccatcttattgagaatgttgtgaccacatttgctccaaaccgactgaagacctgg
tggcaatctgagaacggtatggaaaatgtcaccattcaactgaacttggaggcggagttc
cacttcactcacctcatcatgaccttcaaaacgtttcgacccgctgccatgttaattgag
cgttcagcagactttgggaaaacctggaatgtgtatcgctactttgcctatgactgtgaa
tcgtccttctctgatgtttctgccggtcccatggtgaaggttgatgatgttatctgtgac
tcacgctattccgacattgagccatcgactgagggagaggtaattttcagagttttggac
ccagctttccggatcaatgacccatatggtcctcgaatccagaatatgttaaagatcacc
aatctcagggtgaagttcacaaaacttcacacgcttggggacaacctgcttgacacgcgc
atggagataaaagaaaagtattactatgccatctatgacatggtagttcgaggaaactgc
ttttgctatggacatgcatcagagtgtgtccccgtctgggcaactggccctgttagagag
ggcatggttcatggtcactgcatgtgtaatcataatactaaaggactgaactgtgaacag
tgtcaagaattctatcatgatctaccatggaaaccagctgagggacgcaataccaatgcc
tgcaagaagtgtaactgcaaccaccactcagactcatgtcactttgacatggctatctac
atggcttcaggaaatagaagtgggggtgtttgcgatcactgtcaacacaatacagccgga
taccactgtgagcggtgcaaaccattttacttccaaaatcctgagaaagatgttcgagat
ccaaacatctgccaatcttgcagttgtgacactttaggctccctaaatggaggactgtgt
gatgggaggacagacatcagagtaggactcatttctggtcaatgtcggtgcaaaatcaac
gtggagggagaacgctgcgacagctgcaaacagggatattatgggctcactgatatacca
gaaggctgcaaagcatgcacttgcagttttctgggaacctttcctggtcaaaatccttgt
gacagtgagacaggaaactgtttttgtaaacgattggtgactggaacggactgtgaccac
tgtgtgtctgaacactggggtcttagcaatgacatggatggctgcagaccatgtgactgt
aacctggggggagcaatcaacaaccagtgcgatcagctgactggtcagtgtgtctgcaga
gatcacgtttttggccgtcgctgtgatcaacttgagtcaggattttacttcattgctttg
gaccactacacctatgaggcagaggatgccaagttaggacccggtggaatggtggtttca
aggtccgaccctcaggaccacagccccacctggacaggtttgggcctggtcaatgtttca
gagggagccttccttgagttcactgttgacaacattccttactcaatggagtatgacatt
ctcatccgctatgagcctcagctgcctgaccaatgggaggaggttttgatgacagtgatt
agactgaaacctatcagagcagatagtcgttgtataaatactgtgccagatgatgaccac
caaatgatttctcttcaccctgggtcacgacatgtggctcttcccagaccagtttgtttc
gaatcaggtctgaactataccatccgcctcaatctcccattgtattcaggcctcagggat
gttcagtctccatacacactcattgattcgattgtgctgatgcctcattgtaagaacttg
gacctatttaccaccttgcaaggaggggaatctggtgaaaacaatcgatgggaaactttt
aaacattatcgttgtctggaaaaaagccagagtgttattaagacaccaatgaccgacgtt
tgccaaaacctattgttccgtgtttctgctctgctacaccaaggagccaaagaatgccag
tgtgatccccaaggttctctgagtacagtctgtaatgtgagtggaggtcagtgtgagtgt
cgacctcatgttgttggtagaaactgcgacagatgtgctccagccactttccagtttgga
ccaagtggctgcaaagagtgcaactgtgatcctcagggctcccagagccccctttgcaac
caggtcactggtcagtgtgagtgtgtttcgggagtatatggacatcattgtcatcgctgt
cttccgggctactggggcttccctacatgccgtccatgctcctgtaatggacacacagag
gactgtgatgctcaatcgggacagtgcctcaactgcagggactacaccacaggacaaaac
tgtgacaggtgcttggatgggtactatggcaatctaacattgggctctggtgaccattgt
cacccctgtaagtgtcctgatggtcctggcagtctgcggcagtttgcaggaagttgtttc
cgtgatgattcccaaaaagccatctgtgtctgtaacactggatacatgggtgctcgctgc
aatgagtgcttccctggttactatggaaatcctcatgtgataggggggtcatgccagccc
tgtcagtgcaacaacaacattgacttgttggatccacaatcttgcaacgctcaaactggt
gaatgcctgcgctgcctttacaatagcgtggggtattcctgcgaaaactgtatgatgggt
tactatggcaatgccttactccaagactgtaggaagtgtgtttgtaacgaggtgggcagt
gatggtgccagttgtccatcaccaggtgactgtcactgtgacctcgttagtggacagtgt
cattgtcttccgaatgtgattggccagcactgtgatcattgtgcacctgacacctggaac
atggcaagcggtaagggctgtcaggcctgtgattgtgacaccaaacattcatacgggacc
ttctgtaatgagatcagcggtcagtgttcatgtgcaccaggcttcggaggcaggacgtgc
agcgagtgtagagccctcttttggggagacccaaaggttgaatgttatgaatgtgactgt
caatcttacggtatcactcagctgcaatgtaacaaagacaatggacattgcatttgtatc
gaaggagtgtcaggtccacgttgtgatacctgtgcccatgggttctctggcaccttcccc
aactgccaccgctgccaccaatgctttgctgagtgggatgctgtcattgggcaattaaca
aatcagacacatcgccttgcaaacaaagtaaatgctatcaaaactagtggagtcgggccc
tacagaaagtctattgagagtctggaaaagagtgcatcagacatccaagccatcctccat
caaaatccagcctcacaacctttaagtgagatcgaacagcttttacaagaggccagtgac
ttgatggggtcactgagccagtcactgaactacacagaaaatcttcgattcagcgttcaa
gaagaggacagcagcatggaagcaaaattaaaattactaatggcagatgctcagaaactc
gagcagactgttgaggatattctgtatcaggttgagttaatcaagtactccgacattaga
ggggcagttaacagtgtcactaagtactttttgcagtctcaggaggcggaagaacgtgca
attgcatccaccactgattcaaacagccccttggagaactctgctaacctacggaaactc
acagagaataagatgaacctaaccaaagatgagttcctcaggagacacattgagcatgtg
cagaaactggatgacctggctggtcagatccagactcttgacctgaaagagctcagccac
aagacatgcaggaatccagcaggtcaggactcatgttcctcttcctgtggggaattagat
tgtgttaatacacagggtgacctcatttgtagaggggaagattgtgatggtgtgatttca
aaggttcattcaagtttgcagaaagcttttgactctgaacatgaaatattaaatgccatg
gacgaagtggatcaatttgccaacatggtttcagaggcaaaacaaaaggcgaatcaagca
aaaatgagcgcttacaatgtttttatgaagactaacaggaccaaacagaattttgatcag
agcaatgaggagctcaagacccttatccgagagattcatggattcctcacagaggaggga
gcagacttggagagtattcaaaaagttgctgatgaggtgctggccatgcagatgccaacc
acacgagaacagcttcagaacttcactgatgaaattcgggagaaggtgggggaattgggc
aatgtggagactatcctgcagcagagcactgacaatattgagagagctacaattctcctt
gagcaggcccgccaagttagccaggaggcagctgatgcgaaggactcttcagagatagtc
aaagaagctctggaagaagctcagagagctcagacagctgccagcagtgcaatccagcag
gccacagatgatatcaaaaacaccaacaagctactgctctcagtgaaatcagatacatca
gatggagaaataaaattgaacaatgccacaagacggctgcagcagcttaatgaggaagtg
tcactgcttagagacaaaactctgaatggcacactcatcagtgaactcactattcaggat
gcaacaagcataagacaaatagtcaaagaggcgaaaaaggacatcgactccgaacttaag
gacaagtactccactgtagcgcatctaattgatctaaaggggaatgctgttgctaatgca
aataagagggcagaattattgcagcaagaagccaaggagctgctgttgcaagccagtgac
aagctgcagattctcaaagagctagaaaaatcatttgaggtcaaccatcatgccctggaa
gtcaaggcagaacagctggtggacctggaaaactcagtgaaggagttgctgcaggagata
agccacaaagttacagtgtacaacacctgtttattctaa
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integrated database retrieval system
