Syngnathoides biaculeatus (alligator pipefish): 133502642
Help
Entry
133502642 CDS
T09681
Name
(RefSeq) caldesmon-like isoform X1
KO
K12327
caldesmon
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Pathway
sbia04270
Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
133502642
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
sbia04812
]
133502642
Cytoskeleton proteins [BR:
sbia04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Others
133502642
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Caldesmon
Motif
Other DBs
NCBI-GeneID:
133502642
NCBI-ProteinID:
XP_061679655
LinkDB
All DBs
Position
6:complement(27750908..27771487)
Genome browser
AA seq
700 aa
AA seq
DB search
MDDDFDRRMELRRQRREQMRLETEKMGYSNDDNDEEAAREQRRRAREERKKMRETEESGS
GDVVDANDVAEEDKASCSSAMSIAAADDEQALEERLAKREERRQKRMQEAIERQKELDPS
FAAANGIDQADVDAGRMRDAQVKEEEEEEEEEEKQVQEEVTDDDTKEEKGGLVEVSIQLT
SRTKDETEAERQEAVAPDLDKEEEQQQRIREEEEKEKEEDHQWNAMEEKRRIEEEEEERK
KREEEERQEREMEERRKKEEEEEQKRELEERCRKAEEEKRKQEVEEEKKLREEQEKREME
KRRKEEEEKQKREAEEKKKEEEQKRREMEERKKKEEEAKRQKAEEKKKEEEEQKRREMDE
RKKKEEAKRKREAEERTKKEEEEKRKKRELEEKKKKDENGTGKQNGALIEVKLNKSDKRS
RDEGPAFSERREAERKLQQLQRRRDDAESEEMEKMKRKQHHAEAELEELKRKREERRKVL
GEEEKQRKQEMEDKKSKEQEERKRMKEEIEKRRAEAAEKKKQLGEEPQKPSFAVGPKGSS
KIGEKAEFLSKSAQKSVRATHSPIVSKIGSRLEQYASAIQGNKEVKSPKALMADIPSGGT
RSIKSMWESGQVSNNQANKDCVSMKGSVASRTPKPSQADKTPPAASEAAPEAAPLTKPSA
QQRTQDVNKQSDVGNKRNVWETKKSSTPAKGLVGVKSKFA
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
atggacgacgactttgaccgccggatggagctgaggaggcaaaggagagagcagatgcgc
ctggagaccgagaaaatgggttactccaacgacgacaacgacgaggaagcagctcgggag
caaaggagacgagccagggaggagaggaagaagatgagagaaacggaagaatccggaagc
ggcgacgtcgtcgacgccaacgatgtagcggaggaggacaaggcctcctgctcctccgcc
atgagcatcgcggccgcagatgacgagcaggccctggaggagcgcctggccaagagggag
gagcgaaggcagaagaggatgcaggaggccatcgagaggcagaaggagctggacccgagc
ttcgccgcggccaacgggatcgaccaggcggacgtggacgcggggaggatgagagatgcg
caagtgaaggaggaggaggaggaggaggaggaagaggagaaacaagtccaggaggaggtg
actgacgatgataccaaggaagaaaaagggggcttagtggaggtgtcaatacaactaact
tccagaactaaggatgagactgaagctgagcgccaggaagcggttgcgcctgatcttgac
aaggaagaagaacaacagcaaaggataagggaagaggaagagaaagagaaagaggaggac
catcagtggaacgcaatggaggaaaagaggaggatcgaggaagaggaagaggagaggaag
aagagagaagaggaggagaggcaggaaagggaaatggaggagaggaggaaaaaggaagag
gaggaagaacaaaagcgggagctggaggagagatgcaggaaagcggaggaagagaagcga
aaacaggaggtggaggaggagaaaaaactgagggaggagcaagaaaaacgggagatggag
aagaggaggaaggaggaggaagaaaaacagaagagagaagcagaggagaaaaagaaggag
gaggagcagaagaggagagagatggaggaaaggaaaaagaaagaggaggaggcaaaacgt
cagaaagcggaggagaaaaagaaggaggaggaggagcagaagaggagggagatggacgag
aggaaaaagaaagaagaagcaaaacggaaaagggaagctgaggagaggactaaaaaagag
gaggaggagaaacgcaaaaagagggagctggaggagaagaaaaagaaagatgagaatgga
acaggcaaacagaatggagcgctcatcgaggtcaagctgaacaagtcggacaagcgatcg
agggacgaagggccggcgttctcggaacgccgggaggccgagcgcaagctgcagcagctc
cagcgccggcgggacgacgccgagagcgaggagatggagaagatgaagcggaagcagcac
cacgccgaggccgagctggaagagctgaagaggaagagggaggagaggaggaaggtcctc
ggggaggaggagaagcaaaggaaacaagagatggaggacaagaagagcaaagagcaggag
gaaaggaagaggatgaaggaggagatcgagaagaggagagcggaggccgcggagaagaag
aagcagctgggcgaggagccgcagaagccctcgttcgccgtcggccccaaagggtcctcc
aagatcggggagaaggcggaattcttgagcaaatcggctcagaaaagcgtcagagcgacg
cactcgcccatcgtctccaagatcggcagcagactagaacagtacgcctccgccatccag
gggaacaaagaggtgaagtcccccaaggctctcatggctgacatcccttcgggcggcacg
cgcagcatcaagagcatgtgggagagcggccaagtctctaataatcaagcaaataaggat
tgcgtgtctatgaagggaagcgtcgccagtcggacgccgaagccctcgcaggccgacaag
accccacctgcggcgtcagaagcggcacctgaggcagcgccgctgacaaagccttctgca
cagcaacgcactcaagacgtgaacaagcaaagcgatgtcgggaacaagcgaaacgtgtgg
gagaccaaaaagagttcgacgccagccaaggggttggttggagtcaaaagcaagtttgcc
taa
DBGET
integrated database retrieval system
