Syngnathoides biaculeatus (alligator pipefish): 133503003
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Entry
133503003 CDS
T09681
Symbol
rfx2
Name
(RefSeq) DNA-binding protein RFX2 isoform X1
KO
K09173
regulatory factor X 1/2/3
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sbia03000
]
133503003 (rfx2)
Transcription factors [BR:
sbia03000
]
Eukaryotic type
Other basic domains
RF-X
133503003 (rfx2)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
BCD_RFX
RFX1_trans_act
RFX_DNA_binding
THAP
Ferrochelatase
OmpA
ThermoDBP-RP_arch
Motif
Other DBs
NCBI-GeneID:
133503003
NCBI-ProteinID:
XP_061680037
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All DBs
Position
7:complement(15903180..15936607)
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AA seq
857 aa
AA seq
DB search
MVLRCAWGTCNSDERYPARLQGVRLILFPKPKTQLTKCLRWIKACGRPHAQLNVHNINKH
KAVCSKHFVGENGPTDQYPDPIQADGTPCKPTRPLPRKRLKPDSENCFASPPSKKVPPLK
ENTDFMQSSEGGSDTSPSVAALRTSSSAQAPVVQPVPASQQRALVQATGSVQKGGQVQQL
SVSRAQQVSPQVQQSQHVYPSQVHYVGEGGEAVYTNGTIRTAYYNPEAQLYGQSSGGSYF
DSQAGGAHVATVVSSASGGVPPHSMVGIAMDVSSSHIISSGSTYLIHGGNMEGSRNHISH
SSRSSSAMLEMAIENLQKSEGIASHKSSLLNSHLQWLLDNYETAEGVSLPRCSLYNHYLR
HCQEQKLDPVNAASFGKLIRSVFMGLRTRRLGTRGNSKYHYYGIRVKPDSPLNRLQEDTQ
YMAMRQQPVHQKQRFKPLQKVDGMPDNLCVNSHCNNTPEQSVAAQSQHHQQYIDTAHSLP
EFPAPNVGAQPLPERISMNDIKKLQTLYRDHCEATLDVVMNLQFHYIEKLWQTFWCSTAP
PSDGSTTIANSDDELEGVLPREKLVNLCKYEPVRLWMRSCDHILYQALVEILIPDVLRPV
PSTLTQAIRNFAKSLEGWLTNAMTNFPQEIIRIKVAVVSAFAQTLRRYTSLNHLAQAARA
VLQNTSQINQMLSDLNRVDFANVQEQASWVCQCDESVVQRLEQDFKVTLQQQSSLDQWAT
WLDNVVSLVLKPHQGSPSFPKAARQFLLKWSFYSSMVIRDLTLRSAASFGSFHLIRLLYD
EYMFYLVEHRVAQATGETPIAVMGEFSDLSSMMPSLMEKDVSFSDEMSDLGSDADVSRSE
PAVKRERIEMSHPLQEM
NT seq
2574 nt
NT seq
+upstream
nt +downstream
nt
atggtcctcagatgcgcttggggaacgtgcaattctgatgaaagatatcctgctaggtta
caaggggttcggttgattctttttccaaagcctaaaacacagttgacgaagtgtctccga
tggattaaggcttgcggaagaccacacgcacaactcaatgtgcacaatatcaacaaacac
aaggctgtatgttcgaagcattttgttggggaaaatggacctacagatcaatatccagat
ccaatacaggcagatgggaccccttgtaaaccgacgcgtccactaccaagaaaaagactt
aagcctgattcggaaaactgctttgcctcccctccatcaaagaaagttccaccgctgaag
gaaaacactgacttcatgcagagctctgagggtggttccgacacttcgcccagcgtggca
gcgttgcggacctcatcatcagcccaggcgcctgtggtgcaacccgtcccggcctcccaa
cagagagcgctggtacaagccacaggctcagttcagaagggaggacaagtacaacagctt
tcagtatccagggctcaacaggtttctccgcaggtgcagcagtcacagcatgtctatcca
tcccaggtgcactatgtaggggaaggcggagaggccgtttacactaatggaacaattcgc
acggcctactacaacccagaggctcagttgtacggtcagagcagcggggggtcgtacttt
gactcgcaggccggtggagctcacgtcgccaccgttgtctcctctgccagtggtggggtg
ccgcctcatagcatggtgggcatagccatggacgtaagcagcagccatatcatctccagc
ggcagcacctatttgatccatggagggaacatggaaggaagccgcaaccatatatcacac
tcgtctcgctcctcttcagccatgcttgaaatggcgattgaaaacctccaaaagtctgaa
gggattgcaagtcacaaaagcagcctgctcaacagtcatctccagtggctgctggacaac
tatgagaccgctgagggtgtgagcctgccccggtgctccctctacaaccattacttgcgg
cattgccaggaacagaaactggatccggtcaacgcagcctcctttgggaagctcatccgc
tccgtcttcatgggcctcaggacccggcgccttgggaccagaggcaactcaaaatatcat
tattacggcatccgggtcaagccagactctccactaaaccgactgcaagaggacacccag
tacatggctatgaggcagcagcctgtgcatcagaaacaaagattcaaacctctgcagaag
gtagatggaatgcccgacaacctgtgtgtgaactctcactgcaacaacactccggaacaa
tctgttgcagctcagagccaacaccaccagcagtacatcgacacggcccacagcttgccc
gagtttcctgctcccaacgtgggcgctcagcctctaccggagcgcatcagtatgaacgac
atcaaaaagctgcagaccctctacagagaccactgcgaggccactctggatgtggtgatg
aacctccagttccactacattgagaaactctggcagaccttttggtgctccacagcacca
cctagcgacgggagcaccaccatcgccaacagtgacgacgaactggagggtgtgttgcct
cgagagaagctggtcaatctctgtaaatacgaaccagttcgactatggatgagaagctgc
gatcacatcctctaccaggccctggtggagatcctgatcccggacgtgctgcgtcctgtt
cccagcactctcactcaggccatcaggaactttgctaagagtctggaaggatggctgacg
aacgccatgaccaactttcctcaagaaatcattcgcattaaggtggcagtggtcagtgcc
tttgcgcagaccctcagacgttacaccagcctgaaccacttggcccaggcagcgcgcgcc
gtcctccagaacacctcacagatcaaccagatgctgtccgacctcaaccgggtggacttt
gctaacgtgcaggagcaggcgtcgtgggtgtgccagtgcgacgagagcgtggttcagcgt
ctggagcaggactttaaagtcacactgcagcagcagagttccctggaccagtgggccact
tggctggacaatgtggtctctctggtcctcaagccccaccagggcagcccgagtttccca
aaggcggcgcggcagtttctgcttaaatggtccttctacagctcaatggtgattcgagac
ctgaccttgcgtagcgccgccagtttcggttctttccacctgatccggctgctgtacgac
gagtacatgttctacctggtggagcaccgcgtggctcaggccaccggagagacgccgatc
gctgtcatgggggagttcagcgatctgagctccatgatgccatcactcatggaaaaagac
gtgtccttctctgacgagatgagcgacctgggcagcgacgccgacgtgtcccggagcgag
ccagccgttaagcgggagcgcatcgaaatgagccaccctctgcaggagatgtga
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