Syngnathoides biaculeatus (alligator pipefish): 133503013
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Entry
133503013 CDS
T09681
Symbol
tmco1
Name
(RefSeq) calcium load-activated calcium channel
KO
K21891
calcium load-activated calcium channel
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sbia04131
]
133503013 (tmco1)
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sbia02000
]
133503013 (tmco1)
Membrane trafficking [BR:
sbia04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Multi-pass translocon (MPT) complex
133503013 (tmco1)
Transporters [BR:
sbia02000
]
Other transporters
Pores ion channels [TC:
1
]
133503013 (tmco1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EMC3_TMCO1
DUF5683
DUF6809
DUF2368
Vpu
Exonuc_VII_L
DSHCT
DUF4257
DLH
Nucleoside_tran
Piezo_TM1-24
Peptidase_S49_N
DivIC
Motif
Other DBs
NCBI-GeneID:
133503013
NCBI-ProteinID:
XP_061680066
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All DBs
Position
7:complement(11452686..11455372)
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AA seq
188 aa
AA seq
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MSTMFADTVLIVFISVCTALLAEGITWVLVYRTDKYKRLKAEVEKQSKKLEKKKETITES
AGRQQKKKIERQEEKLKNNNRDLSMVRMKSMFAIGFCFTALMGMFNSIFDGRVVAKLPFV
PLSYVQGLSHRNLLGEDYTDCSFIFLYILCTMSIRQNIQKMLGLAPSRAATKQAGGFLGP
PPQAAKFS
NT seq
567 nt
NT seq
+upstream
nt +downstream
nt
atgagcacgatgttcgccgacaccgtcctcatcgtcttcatctccgtgtgcacggcgctg
ctagccgaaggaatcacctgggtcttggtgtaccgcacggacaagtacaagcggctcaag
gcggaggtggagaagcaaagcaagaaactggagaagaaaaaggaaaccatcacggaatcg
gcgggtcgtcagcagaagaagaagatcgaacggcaagaggagaagctcaagaacaacaac
cgagatttgtccatggtgcgcatgaagtccatgtttgccatcggcttctgcttcacggct
ttgatgggcatgttcaactccattttcgacgggcgtgtggtggccaagttgcccttcgtg
ccgctgtcgtacgttcagggcctgtcgcaccgcaacctgctgggcgaggactacaccgac
tgctccttcatcttcctctacatcctctgcaccatgtccatccgacagaacatccagaag
atgttgggcctggccccctccagagcggccaccaagcaagcggggggcttcctgggcccc
cctccccaagccgccaagttctcctag
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