Syngnathoides biaculeatus (alligator pipefish): 133503101
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Entry
133503101 CDS
T09681
Symbol
hps3
Name
(RefSeq) Hermansky-Pudlak syndrome 3 protein isoform X1
KO
K20190
Hermansky-Pudlak syndrome 3 protein
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sbia04131
]
133503101 (hps3)
Membrane trafficking [BR:
sbia04131
]
Endosome - Lysosome transport
Others
BLOC-2 complex
133503101 (hps3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HPS3_C
HPS3_N
Motif
Other DBs
NCBI-GeneID:
133503101
NCBI-ProteinID:
XP_061680260
LinkDB
All DBs
Position
7:complement(27823787..27868274)
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AA seq
1061 aa
AA seq
DB search
MVHVYNCHPYASQQIVQVEQEPVLFCCGGRALFVVTTGGCKVEAYNLEQEGCPLICRFAT
MGTVRSILHSDIGDYLVTVEEKNSATYLRAYTNWRYQAEEKARVGVRLLGHLLRGSSQRG
GAQMEIIEIPLSDHPVAVACCSVTGDLLVGCDKTLVLFTLRRQNVQNLQHPSNTQQSSSQ
CPDKTSNQNCSFLDFERSVILHLPGTNPKQVALCAGYVAVQTDLEVLVLKLDTKYELNNL
ELEESSEAPKKDQSEDQADFLLLPRHQELLGERAKDCDIPIIIEKTGLEDRGQNTVSYVL
FRRFSPDYFQGCSVEETRLHSLKLQPLFTSSQSPVEEPTCVFCFFSLPTTGYLYSLKGGV
ELLSTYQYPEKVLEAVLTDYLLHVITKSALQCFTVRCAAVAARFEDPYIDTTMRACPPCS
LEVCALRMQLFIGLRSMCVYDRHIVLFSTADTETPEETERSLHRRGLMLKEHTMLTGIFL
AVGIDPTTTPALESLLSRPFLSRKLTMSVPKETSAVGHGWNLYVVDTVPPLTLYQEMVDY
SQHYAQNNQRSESLWHLLSEAHLLLRAALIQSSQLQCRSRSGSADSYLEKQVTVQTHRPE
MEEAFRENCAQLGDCFSRGSQSYCHQALPYYRMSGLSVIDVMARNRPVPSSPHSYGPGFL
FYLKHYLLEETDLHLSQEAADEVIDIFSQSEPLQLISVCASSTMTNVNPARTLRILQQLE
DSVGVSVALTITMATMLLRLDDLPLYTQLMERHAEMMLVYGFIEEPRLLLHGGIGDQHMN
ICPTVLTQQMAKSQPGLLVATMVALHENSKVQLEQVDHMFQVLGCENSLQVDFWEAMLMA
SSHEAVIQELLFRLSSVYIDRLVHTSTDKQLHEPPAHRSLKSADDLINSCSHYGALYPWL
TVLNPLHSTSFQHLEALHKMQSLLCGPSLSVAAVAPFLESLSDKQLWGFSLHLLCATRRG
HYNCSIEDLLDRCPQAIIAYANHHLQDQYMDLWWQKLLPELCNRTRIATDDSILLAALKE
TLIVVAMETSPAHFLELIPDDGTASYFLPHLLTCTQRHLLA
NT seq
3186 nt
NT seq
+upstream
nt +downstream
nt
atggtgcacgtatacaactgccacccttacgcctcacagcagatagtacaggtggagcag
gagcctgtgttgttctgctgtggaggcagggccttgtttgtggtcaccactggaggatgc
aaggtggaagcctacaatctggagcaggaaggctgtcctcttatctgtcgcttcgctacc
atgggaactgtacggagcatcctccacagtgatatcggagactacctggtcactgttgag
gaaaagaatagtgccacctacctgagagcctataccaactggcgttaccaggccgaggaa
aaggctcgtgttggtgtacgcttgttaggccaccttcttcgagggtcatctcaacgtggc
ggagcacagatggagataattgagatccctttatcggaccatcctgttgcggttgcgtgt
tgttcagttacaggtgacctcctagtcgggtgtgacaagactctggttctgtttactttg
agaagacagaatgtgcagaacttacaacacccttcaaacacccagcagagctctagtcaa
tgtccagataagacctcaaaccaaaactgttcctttctggactttgaacgctctgtcatc
ctccatcttccgggaactaaccctaagcaggtggcactctgtgcaggatatgtagctgtg
caaactgacctggaggtgctggtcctgaaactagatactaagtatgagctaaacaacctg
gagctggaggagtcatctgaggcaccaaaaaaagatcaatctgaagaccaggctgacttc
ctgctccttccaagacaccaggagttgctcggtgaacgagctaaagattgcgatatccct
attatcatcgaaaaaacagggctagaggatagaggacaaaacactgtctcctatgtccta
ttcagacgtttttctccagattactttcagggctgcagtgtggaagagacacgccttcac
tccctgaaactccaaccattatttacaagctcccagtctccggttgaagaaccaacttgt
gtcttttgcttcttctcccttcccaccactggctatctatacagcctgaaagggggagtt
gagcttctctcaacttatcagtatccagagaaggtcttagaagcggtgctgacagactac
ttgctacatgtcattaccaagagtgcactgcagtgcttcacagtacgttgtgcagcagtt
gcagccagatttgaggacccctacattgatactactatgagggcttgtccaccctgcagc
cttgaggtgtgtgccctcaggatgcagctgtttattggccttcgctcaatgtgtgtgtac
gaccgtcacatcgtcctgttctctactgctgacactgagacaccagaggagactgaacgc
agcctacaccgcagaggcctcatgttgaaagaacacaccatgctgactggtattttcctg
gcagtgggaatcgatcccaccaccacgccagctctggagagcctgctatcacgccccttc
ctgagcaggaagttgacaatgtctgttcccaaggagaccagcgctgtaggacacggatgg
aacctctatgtggttgatacagtccctccactaactctttaccaagagatggttgactat
agccagcattatgcacagaacaaccagcgatccgagagtctttggcaccttctcagtgaa
gctcacctcctcctccgtgcagccttgatccaatcttcacaactgcagtgccgcagcagg
agtggctctgcagacagttatcttgagaagcaggtcactgttcaaactcacagaccagag
atggaggaggcattcagggagaactgtgctcaactgggagactgtttcagcaggggaagc
cagagttactgtcatcaggcattgccatattacagaatgtccggcctttcagtcattgat
gtcatggccaggaatcgccccgttccaagcagcccacactcctatggcccaggctttttg
ttttacctgaagcattaccttttggaagagactgacctgcatctcagtcaggaagcagcg
gatgaggtgatagacatttttagccaatcagaacccttgcagctcatcagtgtgtgcgca
agctccaccatgacaaatgtcaatcctgcacgcacacttcgaatcttgcagcaactggag
gacagtgtgggcgtgtctgttgcgctaacaatcaccatggcaaccatgctgctgcgtttg
gatgatttgccactgtacacacagctaatggagagacatgctgagatgatgttggtatat
ggcttcattgaggagccaaggctgttactgcacggaggaattggagaccagcacatgaac
atctgtcccacagtattaacccaacagatggcaaagtcccagcctggcttgttggtggct
acaatggtggctctgcatgagaacagcaaagttcagcttgaacaagtggaccatatgttt
caggtgctgggctgtgaaaacagcttacaagtggatttctgggaggccatgctcatggcc
tcgtcacacgaagctgtcattcaagagcttctgttcagattgtcttctgtctacattgac
cgactcgttcacacaagtactgacaaacaactgcatgaacctccagcacacaggtcacta
aagagtgctgatgatctgattaattcctgctcccattatggtgctttgtatccatggctc
acagttctcaatccacttcacagtaccagcttccaacacctggaggcattacacaaaatg
cagtcgctcctatgtggcccatccttgtctgtggccgcagtcgcaccttttttggaaagt
ttgtcagacaaacaattatggggcttcagcttgcaccttctctgtgctaccagaagaggg
cattataattgcagcattgaagaccttctggatcgatgcccccaagcaattatagcctac
gccaatcaccacttgcaagatcaatatatggatttatggtggcagaagctgctcccagaa
ctttgcaatcggacaagaattgcaacagacgacagcattctgttggctgctctcaaagag
acgctgattgtggttgccatggagacaagtccagcacacttcctggagctgatacctgat
gacggcacagcttcgtacttcttacctcacttgttgacctgcacccagagacatttatta
gcctaa
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