Syngnathoides biaculeatus (alligator pipefish): 133503177
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Entry
133503177 CDS
T09681
Symbol
polr2c
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB3
KO
K03011
DNA-directed RNA polymerase II subunit RPB3
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Pathway
sbia03020
RNA polymerase
sbia03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
133503177 (polr2c)
09124 Replication and repair
03420 Nucleotide excision repair
133503177 (polr2c)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sbia03021
]
133503177 (polr2c)
03400 DNA repair and recombination proteins [BR:
sbia03400
]
133503177 (polr2c)
Transcription machinery [BR:
sbia03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
133503177 (polr2c)
DNA repair and recombination proteins [BR:
sbia03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
133503177 (polr2c)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
Motif
Other DBs
NCBI-GeneID:
133503177
NCBI-ProteinID:
XP_061680459
LinkDB
All DBs
Position
7:8372809..8373938
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AA seq
275 aa
AA seq
DB search
MPYANQPTVKITELTDENVKFVIENTDLAVANSIRRVFMSEVPTVAIDWIQIDANSSVLH
DEFIAHRVGLIPLTSDDIVEKMQYSRDCTCDEFCPECSVELTLDVRCTDEKTRNVTSRDL
LSNNHRVIPVTSRSRDNDPNDYAERNEILLVKLRKGQELRLRAYAKKGFGKEHAKWNPTA
GVAFEYDPDNALRHTVYPRPEEWPKSEYSEIEEDEVQAPYDPNGKPERFYYNVESCGSLR
PETIVMSALAVLKKKLSDLQTQLNHEIQSDVLTIN
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atgccttacgccaaccaacccacggtaaaaatcacggaacttaccgacgagaatgtcaaa
tttgtcatcgagaataccgatttggcggtggccaattccattcgacgcgttttcatgtcg
gaggtgccgaccgtcgcgatcgactggatccagatcgatgcgaactcgtcagtgctgcac
gacgagttcatcgcgcacagagtcggcctcatcccgctcaccagcgacgacattgtggaa
aaaatgcagtactccagggactgcacctgcgacgagttctgcccggagtgctccgttgag
ttaacgttggatgtgcgttgcaccgacgaaaagacgcgcaacgtcacctcacgcgacttg
ttgtccaacaaccacagagtcatcccggtgacgtccaggagtcgcgacaacgatcccaac
gactacgccgaacgaaatgaaattttgctggtcaagctccggaaaggccaggaactgcga
ctgagggcttacgccaagaaagggttcggcaaggagcacgccaagtggaacccgacagcg
ggtgttgcgttcgagtacgacccggacaacgccctgaggcacacggtctacccccggccc
gaggaatggcccaagagtgaatattccgaaatcgaagaggatgaggtgcaggctccctac
gaccccaatgggaagccggaaaggttctactacaacgtggagtcttgcggttccctccga
cccgagaccattgtcatgtccgcgttggccgtcctcaagaagaagctgagcgacctgcag
acgcagctcaaccacgaaatccagagcgatgtcctcaccatcaactga
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