Syngnathoides biaculeatus (alligator pipefish): 133503231
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Entry
133503231 CDS
T09681
Name
(RefSeq) cadherin-2-like isoform X1
KO
K06736
cadherin 2, type 1, N-cadherin
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Pathway
sbia04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
133503231
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sbia03036
]
133503231
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
sbia04515
]
133503231
04090 CD molecules [BR:
sbia04090
]
133503231
Chromosome and associated proteins [BR:
sbia03036
]
Eukaryotic type
Centrosome formation proteins
Other centriole associated proteins
133503231
Cell adhesion molecules [BR:
sbia04515
]
Cadherins
Major cadherins
133503231
CD molecules [BR:
sbia04090
]
Proteins
133503231
BRITE hierarchy
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_3
Cadherin_pro
Motif
Other DBs
NCBI-GeneID:
133503231
NCBI-ProteinID:
XP_061680590
LinkDB
All DBs
Position
7:10930237..10971052
Genome browser
AA seq
917 aa
AA seq
DB search
MRPLWICWTLMAAPLQVAAVLGDAEAGGTPSPRPCARGFSRDRHTEETQREAERGQPVVN
NARFQDCDDGGKARPDAASEPRVSRKGAVAALSRATRGERAPSVHPRESRTRQTRKTRSG
LLGQAQPGDASPKMLFPWRGGGGGGRAVVRDDGALRRVKRDWVIPPINVPENSRGQFPED
LVRIRSDRDKSWMLRYSVTGPGADQPPTGIFIINPISGQLSVTKPLDREHIPNFHLRAHA
VDLNGNQVETPVEIHINVIDQNDNRPEFSHAVFNGTVPEGSKPGTFVMTVTALDEDDPKT
ANGMLRYKILSQSPQSPSSNMFTINNKTGDIITVAAGLDREKVSEYTLIIQATDMEGNPT
YGLSNTATTVVSITDVNDNPPEFTTDTFFGEVRENSLNVIVTNLTVTDKDRPHSSAWNAV
YRIVGGDSTGRFSVPTDPTANEGLLTVVKPVDFEVTHSFVLSVEAANEAPLVRGIHPPRQ
STATVSIRVLDLNESPEFSPNPKPIKLDEGLPAGSLLTTFTAQDPDHFMRQTIRYSKMFD
PANWLEMDPVNGRISTIAILDRESPYVKNNLYNVTFMAADNGVPPASGSGTLQMYLVDIN
DNAPQVFPTEVEMCERPDAGGGINITAVDPDLSPNAGPFAFELPARPSDVRRNWTLSRLS
GEQTQLRLRLRNGGGGRSLPHGVYEVPVTITDSGTLPMSNTSYLRVKVCRCDRHGDCVDM
QRVMAAGLGTGAVIGILLCVIVLLVLVLLLGMWMKRRDKERQAKQLLIDPEDDVRDNILK
YDEEGGGEEDQDYDLSQLQQPDSAAEGECGVKAGVRRLDERPLHHDHQYPLRSGAPHPGD
IGDFIHEGLKAADNDPTAPPYDSLLVFDYEGGGSTAGSLSSLHSASSGADQDYDYLGDWG
PRFRKLADLYGGGGGDD
NT seq
2754 nt
NT seq
+upstream
nt +downstream
nt
atgcggccattgtggatctgctggacgctgatggcggcaccgctgcaggtggcggcggtc
cttggcgacgccgaggcgggcgggacgccttcgcctcggccgtgcgcgagagggttctcg
cgggaccggcacacggaagagacccagcgggaggcggaacgcggacagcccgtcgtcaac
aacgcgagatttcaggactgcgacgacggagggaaggcgcggcccgacgccgcgtccgaa
ccccgcgtgagccggaagggggcggtcgccgcgctgagccgggcgacacgaggggagaga
gcgccgtcggtccaccctcgagagtcccgcaccagacagacgcggaaaaccagatcgggc
cttctcggacaggcgcagccgggcgacgcgagccccaagatgctgtttccgtggcgcggc
ggcggcggcggtgggcgagccgtcgtcagggacgacggcgctctgcggcgagtcaagagg
gactgggtcattccgcccatcaacgtgcccgagaactcgcgagggcagttccccgaggac
ctcgtcaggatccgatcggaccgggacaagagctggatgctgcgctacagcgtgacgggt
cccggtgccgaccagccgccgacgggcatcttcatcatcaaccccatctcgggtcagctg
tccgtcaccaaacctctggaccgcgagcacattcccaactttcacttgcgcgcccacgct
gtggacctgaacggcaaccaggtggagacccccgtggagattcacatcaacgtcatcgac
cagaacgacaatcggcccgagttctcgcacgccgtcttcaacggcaccgtgccggagggc
tccaagccggggacctttgtgatgaccgtgacggcgctggacgaggacgatcccaagacg
gccaacgggatgctgcggtacaagatcctgagtcagagtccccaaagtccgtcctccaac
atgttcaccatcaacaacaagaccggtgacatcatcaccgtggcggcgggcctggaccgc
gagaaagtgtccgagtacacgctgatcatccaggccaccgacatggagggcaaccccact
tacggcctttccaacaccgccaccaccgtcgtcagcatcacggacgtcaacgacaaccca
cccgagttcaccaccgacacgttctttggcgaggtccgcgagaactcgctcaacgtgatc
gtgacaaacctgacggtgaccgacaaggaccggccgcactcttcggcctggaacgccgtt
taccggatcgtcggcggagactccaccggacgtttctccgtccccaccgaccccaccgcc
aacgaggggctcctgaccgtggtcaagcccgtcgactttgaggtgactcactcgttcgtt
ctgagcgtggaggcggccaacgaggcgccgctggtccgcggcatccacccgccgcgccag
tccaccgccaccgtatccatccgcgtcctggacctcaacgagagtcccgagttcagcccc
aatcccaaacccatcaagctggacgagggcctgcccgccggctcgctgctcaccaccttc
acggcgcaagaccccgaccacttcatgaggcagaccatccggtactccaagatgttcgac
cctgccaactggctggagatggacccggtcaacggtcgcatctccaccatcgccatcctg
gaccgcgagtcgccgtacgtcaagaacaacctgtacaacgtcaccttcatggccgcggac
aacggcgttccgcctgccagcggttcgggcaccctccagatgtacctggtggacatcaac
gacaacgcgccgcaagtcttccccacggaggtggagatgtgcgagcggcccgacgccggc
gggggcatcaacatcacggccgtggaccccgacctcagccccaacgccgggcccttcgcc
ttcgagctgccggctcgcccgtcggacgtgaggcgcaactggacgctcagtcgactcagc
ggcgagcaaacgcagctgcgcctgcgcctgcgcaacggcggcggcggcaggtcgctgccc
cacggcgtgtacgaggtgcccgtcaccatcaccgactcgggcaccctgcccatgtccaac
acgtcgtacctgcgggtgaaagtgtgccggtgcgatcgccacggcgactgcgtggacatg
cagcgcgtcatggccgccggcctgggcacgggcgccgtcatcggcatcctcctctgcgtc
atcgtgctgctcgtgttggtcctgctgctgggcatgtggatgaagcggcgggacaaagaa
cggcaggccaagcagctcctcatcgaccccgaggacgacgtgcgcgacaacatcctcaaa
tacgacgaggagggcggcggcgaggaggaccaggattacgacctgagccagctgcagcag
cccgactcggcggcggaaggcgagtgcggcgtcaaggcgggcgtcaggcgcctggacgag
aggccgctccaccacgaccaccagtacccgctcaggtccggggcgccgcaccccggcgac
atcggggacttcatccacgagggactgaaggcggcggacaacgacccgacggcgccgccc
tacgactccctgctggtgttcgactacgagggcggcggctccacggccggctcgctcagc
agcctgcactcggcctccagcggcgccgaccaggactacgattacctcggcgactggggg
cccaggttccgcaagctggccgacctctacggtggcggcggcggagacgactga
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