Syngnathoides biaculeatus (alligator pipefish): 133503361
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Entry
133503361 CDS
T09681
Name
(RefSeq) UV excision repair protein RAD23 homolog B-like
KO
K10839
UV excision repair protein RAD23
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Pathway
sbia03420
Nucleotide excision repair
sbia04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
133503361
09124 Replication and repair
03420 Nucleotide excision repair
133503361
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
sbia03051
]
133503361
03400 DNA repair and recombination proteins [BR:
sbia03400
]
133503361
Proteasome [BR:
sbia03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
133503361
DNA repair and recombination proteins [BR:
sbia03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
133503361
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XPC-binding
UBA
ubiquitin
UBA_7
Rad60-SLD
Rad60-SLD_2
Crinkler
Ubiquitin_5
Dsc3_N
CoA_transf_3
TBK1_ULD
Motif
Other DBs
NCBI-GeneID:
133503361
NCBI-ProteinID:
XP_061680893
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All DBs
Position
7:11152659..11167551
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AA seq
436 aa
AA seq
DB search
MLTVTLRTLQQQTFKIHIDADETVKALKERIAEERGKDAFPVAGQKLIYAGKILNDDAAL
KEYNISEKNFVVVMVTKPKTAPAPQSPPKSSQQSAPPPPSSSASEPSSSSSSSSVGVPTQ
EAPAGAQSSSEAAPPPAPENTPTTSPEDASPPPSAAPKDPPAAADPAKAEDTPKDEAGSR
ADVHSSSSSLADEVGLLEEAASVLVTGQAYENLLSEIMSMGYRREAVVSALRASYNNPDR
AVEYLLTGLPAAAEAGAEAGDVPGLRDAPSATATDPAAAAAPAPATQTTPTPPPLADSDR
PSSGDGGGSPSTRNPLEFLRNQPQFQQMRQIIQQNPALLPALLQQLGRDNPQLLQQITQH
QERFVQMLNEPQGGAGETRGSSRANYIQVTPQEKEAIERLKALGFPEGLVIQAYFACEKN
ENLAANFLLQQAWDDE
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgctgacggtgacgctgaggacgctccagcagcagacgtttaaaattcacatcgacgcc
gacgagacggtgaaagcgttgaaggagcggatcgccgaggagcgaggaaaagatgccttt
cccgtcgcgggacaaaagctcatctacgcagggaaaatcctgaacgacgacgcggcgctg
aaagaatacaacatcagcgagaagaactttgtggtcgtcatggtcaccaagcccaaaaca
gcccccgcccctcaaagccccccaaagtcgtcccaacaatcagcgcccccccccccttcc
tcctcggcatcagagccgtcctcatcatcttcgtcgtcttcggtgggcgtcccgacacaa
gaagcccccgccggcgcgcagtcgtcgtcggaggcggcgccgccgcccgccccggagaac
acgcccaccacttctcccgaagacgcgtccccgccgccgtcggccgcccccaaggacccc
cccgccgcggcggacccggcgaaggccgaagacacgccgaaggacgaagcgggaagtcga
gcggacgtccattcgtcatcttccagcctggcggatgaggtcggcttgctggaggaggcg
gcgtccgttctcgtgacgggccaggcctacgagaacctgctgtcggagatcatgtccatg
ggctaccgccgcgaggccgtggtgtcggcgctccgggccagctacaacaacccggaccgg
gccgtcgagtatctgctcaccggtctccccgccgccgccgaggccggcgccgaggccggc
gacgttccgggtcttcgggacgccccgtcggccaccgccaccgaccccgccgccgccgcc
gccccggctcccgctacgcagacgacgccgacgccacccccgctggcggactctgaccgc
ccgtcgtcgggcgacggcggcggctcgccgtccacgcggaacccgctggagttcctgagg
aaccagcctcagttccagcagatgcgtcagatcattcagcagaacccggccctgctgccc
gcgctgctgcagcagctgggccgcgacaacccgcagcttctgcagcaaatcacgcagcac
caggagcgatttgtgcagatgctcaacgagcctcaagggggcgccggcgagacgcggggg
tcgtcccgtgccaactacatccaggtcacgccgcaggagaaggaggccatcgagaggttg
aaagcgttgggcttccccgagggtttggtcatccaggcgtacttcgcatgcgagaagaac
gaaaacttggccgccaacttcctgcttcagcaagcctgggacgacgagtag
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