Syngnathoides biaculeatus (alligator pipefish): 133503368
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Entry
133503368 CDS
T09681
Symbol
fxr1
Name
(RefSeq) RNA-binding protein FXR1 isoform X1
KO
K15516
fragile X mental retardation protein
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sbia03019
]
133503368 (fxr1)
Messenger RNA biogenesis [BR:
sbia03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
133503368 (fxr1)
Factors involved in mRNA localization
Other mRNA localization factors
133503368 (fxr1)
mRNA cycle factors
Stress granule specific factors
133503368 (fxr1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FXMRP1_C_core
KH_9
Tudor_FRX1
FXR_C1
KH_1
Agenet
FXR_C3
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-GeneID:
133503368
NCBI-ProteinID:
XP_061680911
LinkDB
All DBs
Position
7:complement(27668839..27710420)
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AA seq
698 aa
AA seq
DB search
MEELEVEVRGSNGAYYKGLVKAIHNDSLTIAFENNWQPERQVPFSDVRMPPPADVKKEIK
EGEEVEILSRATELEPCGWWLAKVCMTKGDFFVIEYASCDATYNEIVTFDRLRPVNTNKA
ITNNYFHKCSIAIPQDLQEACQTDNAHKDFKKAVEACHVSYCPETSQLVIVSTNESTVKR
VSLLSDMHLRSLRTKLMLMSRNQEATKHLENSRHLVSSFQEEFMVRPDLMGLAIGSHGSN
IQQARKVSGVTAIDLDEETGTFRIYGETAEAVKKARNFLEFVEDSVQVPRNLVGKVIGKN
GKVIQEIVDKSGVVRVRIEGDNDNKQPRQETQGMVPFTFVGTKESIGNVQVLLEYHISYL
NDMMELLVQSQQLEEELRKLGDNAQGCSLARLRISGTRHTGGVDEVEQLRLERMQIDEQL
RQLTQGHRPGDKERGERGERGGGGYNMDGSANASSSSSHVGRSYNSRGRGRRGHGYSTGY
GTNSEHSNASETDLERRDEVNDWSQAGEMQTTERERGLRPQRDSRRRLGLGRGRGGRGRG
GYNNSPSGPRGDATETNTETDQTADTDASESNLLTTRQRRSRRRRTDDDTTVMDGMSESE
NTSMSENGIVTVADFMSRADSQSRQMPTKDAEKNEESQVDARAEHSPEVPSAATNGSDNN
APDNESNCATHDPESSTEGVTKVCNKGDPDPKPVVNGL
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
atggaagaactggaggtagaggttcgtggctccaacggggcttattacaagggcttagtc
aaggccatccacaatgattcactcaccattgcctttgagaacaattggcaaccagaacgc
caggtacccttcagtgatgtcaggatgccacctcctgctgatgtcaagaaggagattaaa
gagggggaggaggtggagatcctgtctcgagccactgagctagaaccttgtggctggtgg
ctagctaaggtttgcatgacaaaaggagatttctttgtaattgagtatgcgtcctgtgat
gccacctacaatgagattgtgacatttgatcggttgcgcccagtcaacactaacaaggca
atcaccaataattactttcacaagtgcagtatcgctattcctcaagatctgcaagaagcg
tgtcagactgataatgcccataaggactttaagaaagctgtggaagcctgtcatgtctca
tactgtcctgagaccagccagttggtcattgtgtccaccaatgagtctacagtgaagcgt
gtgtctttgctgagtgacatgcacctccgcagcctcagaaccaaacttatgctcatgtct
cgcaaccaggaagctacaaaacaccttgagaactcgaggcacctggtgtcatccttccaa
gaagagtttatggtgagaccagatttgatgggactggccattggtagtcatggcagtaac
attcagcaagcacgaaaagtttcaggtgtcactgccattgatttggatgaagagactggt
accttcagaatttatggagagacagcagaagcggtgaaaaaggcaaggaacttcctagag
tttgttgaggattctgtccaggtaccaagaaaccttgttggcaaagtcattggtaagaat
ggaaaggtcattcaagagattgtggataagtctggtgttgtgagggtcaggatagaagga
gacaatgacaacaagcaacctcgacaagaaacgcagggaatggtcccctttacctttgtc
ggtacaaaggaaagcattggaaatgtccaggtcttgctggagtaccacatctcttacctc
aatgacatgatggagcttcttgtgcagagccaacaactagaggaagagctgagaaagctt
ggggataacgcacagggatgcagcctagcacgattaagaataagtggcacaaggcacaca
ggaggtgtagatgaggttgaacagcttcgtctggagcggatgcagattgatgaacagttg
cgtcagctcacgcagggccatcgacctggagacaaggagagaggagagcggggggagcga
ggaggagggggatacaatatggatggcagtgccaatgcttcatcttcatcatcacatgtt
gggcgttcctacaacagtcgaggtcgtgggcgcagaggccacggttacagtaccggatat
ggcaccaactctgagcactccaatgcgtctgagaccgatttggagcgtcgagatgaagtc
aatgattggtctcaggctggtgagatgcaaacaacggagagggaaagaggtctgcgtcca
cagagagatagtcgcaggcggctgggactaggaagaggacgaggaggacgaggaagagga
ggatacaataacagcccttcagggcctcggggtgacgctacggagacaaacaccgagaca
gaccagacggctgatacagatgcgagtgagtccaacttgcttaccactcgccagcgaaga
tcccgacgacgtaggactgatgacgacaccacagtgatggatggcatgagcgagtcagaa
aacacctcaatgagtgaaaatgggatagtgacagtggccgacttcatgtccagggctgac
tctcagagcagacagatgccaaccaaggatgccgaaaagaacgaggagagtcaggtggac
gccagagcagagcacagcccagaggtcccctctgcagctacgaatggttctgacaacaat
gctccagacaatgagagcaattgtgccacccatgacccagagtcctccactgagggggtc
actaaagtctgtaacaaaggggaccctgaccctaaacctgttgtgaatggcctctaa
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