Syngnathoides biaculeatus (alligator pipefish): 133503392
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Entry
133503392 CDS
T09681
Symbol
usp13
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 13 isoform X1
KO
K11836
ubiquitin carboxyl-terminal hydrolase 5/13 [EC:
3.4.19.12
]
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sbia01002
]
133503392 (usp13)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sbia04121
]
133503392 (usp13)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sbia04147
]
133503392 (usp13)
Enzymes [BR:
sbia01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
133503392 (usp13)
Peptidases and inhibitors [BR:
sbia01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
133503392 (usp13)
Ubiquitin system [BR:
sbia04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
133503392 (usp13)
Exosome [BR:
sbia04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
133503392 (usp13)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
UCH
UBA_7
zf-UBP_var
UBA
zf-UBP
UCH_1
UBA_9
UBA_4
Motif
Other DBs
NCBI-GeneID:
133503392
NCBI-ProteinID:
XP_061680972
LinkDB
All DBs
Position
7:22091180..22150901
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AA seq
864 aa
AA seq
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MATDLGELLVPYMPTVRVPKTGDRVFKSECAFSFDSPESEGGLYVCMNTFLGFGREHVER
HYRKTGQSVYMHLKRHVKEKATGAAGGAIPRRRNGKVFLDLELNRDFNGEDYEYEDEAKL
VIFPDHFEIPLPNIEELPALVTIACDAVLNAPSAYKKQEPESWEEEIQVSRHARSLRQLD
NGVRIPPSGWKCQKCEMRENLWLNLTDGTILCGKWFFDGSGGNGHALDHYKETKHPLAVK
LGTITPDGADVYSFEEDEPVLDPHISEHLSHFGIDMLQMQKKTENGHHTDNNARPRVSEW
EVIQESGMKLKAVYGSGYTGIKNLGNSCYLSTVLQVLFSIPDFQRMYVGNLQRIFDYSPL
DPTQDFATQMAKVGHGLLSGQYSKPPMKSELIEQVMKEEYKVLNWHQQKGISARMLKALV
GRGHPEFSSNRQQDAQEFFLHMINLVERNSASSENPSDAFRFLVEERVQCCQTRRVRYTQ
RVDYCIQLPAPIEAATNREELLAYESKRREAEENMRPPPEPVRARIPFTACLQAFTEPEN
VPDFWSSALQAKSAGVKTSRFASFPEYLVLQIKKFTFGVDWVPKKLDLGIDVPDFLDLSR
LRATGLQSGEEELPDLMPPIVLPEDTRDSSMSSLDSPEIDEAAVMQLAEMGFPLEACRKA
VYYTGNMGPEMAFNWIIAHMEEPDFAEPLMLPSMFDPGLSSSAHSLMGATPLDNSPPEES
IAILTSMGFPRTHTVQALKATNNNLERALDWIFTHPEEEASDALSSMADTEPNDNALSNA
NSHSDSTLSPDRDMSGPRVKDGPGRYELFAIISHMGASTMSGHYVCHIKKEGRWVIYNDH
KVCLSERPPKDLGYIYFYHRLSSS
NT seq
2595 nt
NT seq
+upstream
nt +downstream
nt
atggctacagacctcggcgagctgctggtgccctacatgcccaccgtcagagtgcccaaa
accggagacagggtgtttaagagcgagtgcgccttctccttcgactccccggaatctgag
ggaggcctatatgtgtgcatgaacacattcctgggcttcgggcgagaacatgtggagaga
cactatcgcaaaacgggccagagtgtttacatgcacctcaagcgacacgtcaaagaaaaa
gccacaggagctgcaggaggcgccatcccaaggcgacggaacggaaaagtgtttttggat
ttagaactaaaccgtgattttaacggtgaggactatgagtacgaggacgaggccaagctt
gttatatttccagaccacttcgagatccccttaccaaatattgaggagttacccgctctg
gtaaccatcgcctgtgatgcagtgctcaacgcgccgtcggcctacaaaaagcaggaacct
gaatcctgggaagaggagattcaggtgtccagacatgcaagaagtctcagacaattggac
aacggagtcagaatccccccaagtggctggaagtgtcaaaagtgtgagatgagagagaat
ctgtggctgaacctgactgatggcaccatactctgcggcaagtggttctttgatggcagt
ggggggaacggacacgctctggaccactacaaagagaccaaacacccgctggctgttaaa
ctgggcaccatcactccagatggagcagatgtctattcgtttgaggaagatgaacctgtg
ttggacccacacatatcagaacacctgtctcactttggaatagacatgctacagatgcag
aaaaaaacagaaaatggccaccacacagacaacaatgcccggccacgggtcagcgagtgg
gaggtgatccaggagtcaggcatgaaactgaaagccgtgtacggttccggttacacgggc
atcaaaaacctcggcaacagctgctacctcagcacggtcttgcaggtcctcttcagcatc
ccagacttccagaggatgtacgtggggaaccttcagaggatatttgactattcacctctt
gatcccacacaggactttgccacacaaatggctaaagtgggccatgggctcctctcaggg
cagtactccaaaccgcccatgaaatctgagctcattgaacaggtgatgaaagaagaatac
aaggtattaaactggcaccaacaaaaaggcatctccgcacggatgttgaaggccctggtc
ggccgaggacatccggagttttcctccaacaggcaacaagatgcacaggagttcttcctg
catatgatcaacttggtggagaggaacagtgcgagttcagagaatccgagtgatgccttc
cgcttcctggtggaggagcgagtccagtgctgccagacacggcgggttcgatacactcag
cgggtggactactgcatccagctgccagcccccattgaggccgcaaccaaccgagaggag
ctgttggcttacgaatccaagcgcagggaagcagaggagaacatgagaccccccccagag
ccggtgagggctcggatccctttcacagcctgcctgcaggccttcactgagcctgagaac
gttccagacttctggagttctgcgctgcaggccaagtctgctggagtaaaaacatctcgc
tttgcgtcgtttccagaatatctggtgctccaaatcaagaaattcacatttggagttgac
tgggtgccaaagaaactagatttgggcatagatgttcctgacttcctggatttgagccgt
cttcgggctacagggctgcagtcaggtgaagaggagctccctgacctgatgccacccatt
gtgttacctgaagacaccagagatagctccatgagctccttagactctccggaaatagat
gaggcagcagttatgcagctggcagagatgggcttccccctcgaggcctgcaggaaggcc
gtctactatactggaaacatgggccccgagatggccttcaactggatcatagctcacatg
gaggagcctgactttgcagagcctctcatgctgccctctatgtttgacccgggcctttcc
agcagtgcacacagcctcatgggcgccaccccgctggataactcgccccccgaagagagc
atcgccatccttacttcgatgggcttccctcgcactcacaccgtccaggcgctcaaagcc
acgaacaataaccttgagagagcgctcgactggatcttcacccacccggaggaggaggcg
agcgacgccctttccagcatggccgacacggagcccaatgacaacgctttgtccaatgcc
aactcacacagtgactccacattgtccccagacagggacatgtcggggccgcgcgtcaaa
gatggaccgggacgttatgagctcttcgccatcatcagtcacatgggagcatcgacaatg
tccgggcactatgtttgtcacattaaaaaggaaggaaggtgggtgatctacaatgaccac
aaagtgtgtttatcagaaaggcctccaaaggacttgggctacatctacttttaccatcga
ctgtcaagcagttaa
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