Syngnathoides biaculeatus (alligator pipefish): 133503434
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Entry
133503434 CDS
T09681
Symbol
tprb
Name
(RefSeq) translocated promoter region b, nuclear basket protein isoform X1
KO
K09291
nucleoprotein TPR
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Pathway
sbia03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
133503434 (tprb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sbia03019
]
133503434 (tprb)
Messenger RNA biogenesis [BR:
sbia03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
133503434 (tprb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_MLP1_2
Motif
Other DBs
NCBI-GeneID:
133503434
NCBI-ProteinID:
XP_061681067
LinkDB
All DBs
Position
7:15826620..15853671
Genome browser
AA seq
2343 aa
AA seq
DB search
MAALLLQDLDSSELSKLSKETLNKLEKVLSDQLSEIDTLKAQQEQFRVDSEQHFFDKVKQ
LAQSREDFLRQTQENSKLKEELEEIADEFKRVRETNQQYESAQEKSLSEQTVLSKAKEEL
ETQKLDLVRTLERRSLELEHLNDDLRQLNDKLVEVSATKMSQQLRLDELEAAEVDLKYKE
KRMEQEKELLHGQNSWLSAELKAKSEELLSLSRQKGNEILELKCSLENKKDELNRVQEQV
ASLKTLNENHQKQNEDLIHKLKEIKEQQTTTEEKFRNELNANIKLSNLYKGAAADSEAKS
EELSRAVEELQKLLQEAGEVNKALEDNLQVASAASDKTVGELKQRIEGLEKELDNANELL
SNFKLRGTVGTTSVLNETQMMTVSPTATAVAKIKPEMKLTELYTAYLEGQEQLQFERLEN
KRVNKYLDDIVQEVEAKGPILKRQRDEHERMQKSVASLSTKLEHAVKEVHRLQNEADEAN
KRSSILERDNKRFELQLADMAQQVRVLLIELEESRGNHVFLDEDSSLGDVTSTSEVITQH
LVTFRSVEELQKQNQRLLVALRDLSDAQEKEELESSGYNRVEVEQTLETTLAEVESLREQ
RNKHIKMSESIMRQRDMYRLLLAQATGVSFSQQGTSAEELPVTSTPGRSPAATPTAGTPT
TLVSMATDTAEALEAKAALRQLQEVFSSYKKERVESDKALAEQNDKLLEQLSDLRSENAK
TATQLEFASKRYEMLQDNVEGFRKEIASLREREQKMASATQKHEQTINTLNEDLRAALEK
LSMAEGLAEGLRKERDMLKLVESRLTQEKDMISSQQQSQNLLMTNLQAIQATLERSDADT
RQRFNTQLEKQEREISQLQKRLEHEVEQRHLLSRNQEIQVFESKRQLEMQVALHEKTKDL
LNAAEMELDSLRLLQGSSEQRQILCSPSTPKTRGLQVSHQEREDLQGRLLQAETQTEQLA
ESLKEATNSMEQYRAMAQRLEESLEKEKQITEQARASIESHVKEAEQQQRRLEEKLLDAE
KEKRNMEEENMKAINSLNEQMDDLQRNLKSAQEEHQMALQRLSAAEAQQLQALQDSQEQA
KLAAEAQDKYEQEMMLHAADVKAMQDAKAQAQQAAELRQQLEERAQRASAELMEARISWG
EQEKILKEEMSKIESRYEEMQKQNVLLHEQIQAMSSKMADNLQRAASESPLNFSFMQEGK
SQEQVLEILRFVRREKEIAESRFEFAQGESLRYRLRVEHLEQELKQVQGSLSAAQEKMHV
TAKTLAQHDDLMKKTETMSILMETNKMLREEKETLEKELQQTQAKVQKLESDVLPLKQAN
TELTEKSGMLQMEKKILDDEIKRWKARTQHLVSQQKDSDPEEYKRLHSEKELHLKRIQQL
IDENNKIKAEVTKTSNLSASQQSQIQTLLDNLSKTNEERNSLKEEIVAKSLEIQEKVKTI
TQVKKLGRRYKTQYDDLKVEYDKVIAEAAGPSKEEEARQASVQELQGLRDSLSQAEIRVK
DLEGQLESINKVVTEREIEVHNAQEQSSRLQTELGRVRQELQEKEDALKRQMADKVEKTR
KAIVFAKQRISQLTSAKDELQKENEEFKQRCEELKQQSEEFEVRVTAIKSQYEGRFNRQE
RELRELRGQQERQEQRDEPVEAGPSKPQEQQRSTEQRQISLKSTPATDRGSASTSEPPTA
NIKPTPVVATASKQAVNPGNKPTPRASIRPMITPATVPTPTPTATVMPTTQVETQEVMQT
TEGPPVEHVTVYGSASGSVRSASPNIQTTLASPMLTVQQTQTQATAFVQPTQQQSVTHAE
PVNQELPPVVIEATQSSQVEWPSTSSTSAVFGTVSATPGSSSSMSKRPREEDESSSTVVT
DTEAPQEDTSRAPIPKKLRIIQRVGPEEEMMADDNAEAEGVVPTDSQEGIEASQTEELAA
LDDDDESAASQSTTMHQEVTLTQSETPEQQLEVIVIVTDTESEENQEEGDEEEDEQDYDE
GDEEEVEEEEEEDDGEESNEGSGEGNEAYDGDDTEGADVTDPGTETEESLGASDSTQRPA
DSQTASFETTTMEAFSTEQPITSSGIRMPQSPRRPTHPLPPTQMSQRIPARRQSVGRVPQ
LSGVPSSAQHHIDDEDRMVPSAPTLVVPHCSDGFDQAVHSSPQMASSRTFRFGQSDDVPQ
TSSDLGQLAAQGGLGMFDSPLFLASHEEESGGRSVPTTPLQLAAPVFSEVVPSDTVEQAS
QSVPMVSTSTPGLLTAGTASTSEERDDVFLESDPDNSRPSAESSVDAVISQDDLVEPSQP
SDTASLPSTSQEPSSSSADTSSAPSRAAPSRQLQRWPGSHGGRVKRGGQAFPSRGVHGRR
IAR
NT seq
7032 nt
NT seq
+upstream
nt +downstream
nt
atggcggcactcttgctgcaggatttggatagttctgagctgtcgaagttatcaaaagag
acacttaacaaactcgaaaaggttctgtccgaccaactttctgaaattgacactctcaag
gcccagcaagaacaatttagggttgacagtgagcaacatttctttgacaaggtgaaacag
ctagctcagtctcgggaagacttcctgagacagacacaagagaacagcaaacttaaagag
gagttggaggaaatcgcggatgagttcaaacgtgttcgcgagacgaaccagcaatatgaa
agtgctcaagagaagtctttgtcagaacagactgtgctttcaaaagccaaggaagaactg
gaaacacaaaagcttgatcttgtgcggacacttgagaggagaagcttggaactggagcat
ttaaatgatgacttaaggcaactgaacgataagttggtggaggttagtgccactaaaatg
tctcagcagctgaggttagatgaacttgaagcagcggaagtcgacctcaaatacaaggag
aagcgtatggaacaagaaaaagagctgctgcatggacaaaactcctggctgagtgcggag
ttgaaggccaaaagtgaagaacttttgagcctgtcacgacagaaaggtaatgaaatcctg
gaactgaaatgcagcctggagaataaaaaagatgagttaaacagagtccaagaacaagtg
gccagtttgaaaacattaaatgaaaaccaccaaaaacagaatgaggacctcatccataaa
ctgaaagaaattaaggagcaacagaccactacagaggagaagttcagaaatgagctcaat
gccaacattaagctctccaatttatacaagggagcagcagctgattctgaggccaaaagt
gaagagctgagtcgagctgtcgaggagctgcagaaactgctgcaagaggcaggggaagtc
aacaaagctcttgaggacaatttgcaagtagctagtgctgcttcggacaaaactgttggt
gagctaaagcagaggatcgaaggactggaaaaggaactggacaatgccaatgagctactg
tccaactttaaactaagaggtacagttggcacaacatctgtgctcaatgagactcaaatg
atgacagtttctcctacagcaactgcagtggcaaagattaagccagaaatgaaactgacc
gagttgtatactgcctatttagaaggccaggagcagctgcagtttgagcgattggagaac
aagcgtgtcaacaaatatctcgatgacatagtacaagaagtggaggcaaagggtcccatt
cttaaacggcagagggatgagcatgagcgcatgcagaaatccgtggcgagtctttcaacc
aagctggagcacgctgtaaaggaggtgcatcgtctgcagaatgaggctgatgaagccaat
aagcgttcctctattttagaaagagacaataaaagatttgaactgcagcttgcagacatg
gctcagcaggtgcgtgtgctccttattgagcttgaagaatcccggggaaatcatgtgttt
cttgatgaggactcgagtttgggggatgttaccagtacctcagaagtgatcacccaacac
ttggtgaccttccggagtgtggaagagctacagaagcaaaatcagcgtcttctggtggcc
ctcagggatctcagtgatgcccaagagaaagaagagttagaatcctctgggtacaaccgc
gtggaagtcgagcagactttggagaccactctggctgaggtggagtctctgagggagcaa
cgcaacaagcacataaagatgtcagagtctatcatgaggcaaagggacatgtaccgtttg
ctgttggcccaggcaacaggagtgagcttctcccagcaaggtacatcagctgaggagctc
ccagtcacgtccacgcctggtcgatcacctgcagccactcccaccgccggaacacccacc
acacttgtctccatggcaactgacactgctgaagcattggaggccaaggcagccttgcga
cagttgcaggaagtgttttcctcctataagaaagaacgagtggagagtgacaaagcactg
gctgagcagaatgacaaactcctggagcagctttcagaccttcgctcagagaacgccaag
acagcaacacagttggaatttgcctccaagaggtatgagatgttgcaggacaatgttgaa
ggcttcaggaaggaaattgcttccctccgggagagagagcagaagatggcctctgccaca
cagaagcatgagcagaccatcaacacattaaatgaggatctacgagctgcactggaaaaa
ctttcaatggcagagggtcttgctgagggtctgcgtaaagagagagacatgttgaaactg
gttgagtccaggttgactcaagagaaggatatgatctcaagccagcaacagagtcagaac
cttttgatgaccaatcttcaggctattcaggcaacacttgagcgttcagatgctgacaca
cgtcagcgttttaacacccagttagagaagcaagagcgagagatctctcaactgcagaag
aggctggagcatgaggtggaacagcggcatttgctgagcagaaaccaagaaatccaagta
tttgaatcaaagcgacaacttgagatgcaagtggctttacatgagaagacgaaagacctg
ttgaatgctgctgagatggaactggactccctcaggttgctgcaaggtagcagtgaacaa
cgtcaaatcctgtgctccccctcgacgcctaaaactagaggcttgcaagtttcacaccaa
gaacgtgaggatcttcagggtcgcttgctgcaggctgaaacacagacagagcagctggca
gagagcctcaaagaagccactaacagcatggagcagtaccgagccatggctcagcgtctg
gaggagtccctggaaaaagagaaacagataacggagcaggcccgtgcttctattgaaagt
cacgtgaaggaggctgagcagcagcaacgcaggcttgaggagaaacttcttgatgctgag
aaagagaaacgtaatatggaagaagaaaatatgaaggctatcaactccctgaatgagcag
atggatgatctccaaaggaatctgaaaagtgcccaggaagaacaccagatggcactgcag
cgtctatcagctgctgaagcccagcagttgcaggctttacaagacagccaagaacaggct
aaactggcagctgaagcacaagacaaatatgagcaggagatgatgctgcatgcagcagat
gtgaaggcaatgcaggatgctaaggctcaggcccagcaagcagctgagctcagacagcaa
ctagaggagagagcccaaagggccagtgctgagttgatggaggccagaatatcctggggg
gagcaggaaaagatcctcaaggaggagatgtccaaaatagaaagccgctatgaagagatg
caaaaacagaacgttctcttgcatgaacagattcaggcaatgagtagcaaaatggctgat
aatttgcagcgtgctgcaagtgagagtccactaaacttctcttttatgcaagaaggcaaa
tctcaagaacaagtcctcgagattctaaggtttgtgcgtcgtgaaaaggagattgcagag
tctcgttttgagtttgctcaaggggagagtttgcgttatcgtctcagggttgaacacctg
gaacaagagctaaagcaagttcagggcagcttaagtgctgcacaggagaaaatgcacgtg
accgcaaagaccttagcccagcatgatgacctgatgaagaagacagaaacaatgagcatc
ttgatggaaacaaacaagatgctgcgagaggagaaggaaacattggagaaagaactgcaa
caaacccaagctaaggtgcaaaagttggagtcagatgttttgccactgaaacaggcaaac
actgagctgactgagaagagtggcatgctacaaatggagaagaaaatactcgacgatgag
atcaagcgctggaaggctcgaacacaacatttggtgagtcaacagaaagattccgatcca
gaagagtacaagcgtcttcattcagagaaggaattacatctgaaacgtatccagcagctc
attgatgagaacaacaagatcaaagcagaggttaccaaaaccagcaatctctcagcatcc
cagcaaagccaaatacaaaccttgctggataatttaagtaagacaaacgaggagcgaaat
tcgctcaaagaagaaatcgttgcaaagagtctggaaatccaggagaaggtaaagacaatt
acccaggtcaaaaagcttggacgtcgctacaagactcagtacgatgatctcaaagtagaa
tacgacaaggtaatagctgaggccgcagggccatccaaagaagaagaagctcgtcaagcc
tcagttcaggaactgcagggacttagagactctctcagtcaggctgaaataagggttaaa
gacctggagggacaactggagagcatcaacaaggtggtgacagagcgtgaaattgaagtt
cacaatgctcaggaacagtcatccaggctgcagactgagctaggcagggtgagacaggag
ctgcaggagaaggaagatgcactgaaacggcagatggcagacaaggtggagaagaccagg
aaggcaattgtttttgctaagcaaaggatcagccagctcacaagcgccaaagacgagctg
cagaaggaaaatgaggagtttaagcagcgatgtgaggagctaaagcaacaaagtgaggag
tttgaagtccgtgtaaccgcgataaagtctcagtacgagggccggtttaatcgacaggaa
agagaactaagagaactgcgaggtcagcaagaaagacaagagcaaagagatgagcctgtt
gaggcgggtccaagcaaacctcaagagcagcaaagaagtacggaacagagacagatcagt
cttaagtccaccccagctacagacaggggcagtgccagcacatctgagccgccaactgcc
aacataaagccaacacctgtagtagccacagcgagcaagcaagccgtcaaccccgggaac
aagcccactccaagggcaagcatcaggcccatgatcaccccagccactgtgcccactcct
acacccactgctaccgtaatgcccacaacacaggttgagacacaggaagtgatgcagacg
acagagggtccaccagtggagcatgtgactgtatatgggagtgctagtggttctgtacgc
tcagcaagccccaacatccagaccaccttagccagccccatgttgaccgtgcagcaaacc
caaacacaagccacagcttttgtccagcctacgcaacagcagagcgtcacccatgcggag
ccagtcaatcaggagctgccacctgtggtaattgaggcaacacaaagctcgcaggtggaa
tggccttcaacatcctccacctctgctgtatttgggaccgtttcagccacaccaggatca
tcttcctcaatgtccaaaagaccccgtgaagaagatgaaagtagcagcactgttgtcaca
gacaccgaggctcctcaagaggacacctccagggctcccattccaaaaaaactgcgcatt
attcaaagagttggtcctgaggaagaaatgatggctgatgacaacgcagaagctgagggt
gtggtaccaacagacagtcaagagggtatcgaagccagtcagacggaagagcttgcggcg
ctggatgatgatgatgagagtgcagcatctcaatctaccaccatgcaccaagaagttact
ctcacacagagtgaaactcctgagcagcagctagaagtaatagtcattgtaaccgatacg
gagagtgaggaaaaccaagaagaaggggatgaagaggaggatgaacaggactatgatgag
ggcgatgaggaggaggtggaggaagaagaggaggaagatgacggagaggagagtaacgag
ggcagcggagaaggcaatgaggcctacgatggagatgacacagagggagctgacgtaacc
gatccagggacagagacggaggagagtttgggggcgtccgactccacccagagaccagca
gattcccagacggccagctttgagaccacgacaatggaggccttctctactgaacaaccc
ataacaagctctggcattcgtatgccccaatcaccaaggagaccaacacatccactaccc
cccactcagatgtcgcaacggattcctgctcgtcgccagtcagtcggcagagtccctcag
ctctctggggtccccagcagtgctcagcaccacattgacgacgaggaccggatggtacct
agcgctcccacgctggtggttccacactgctctgatggttttgaccaggctgtccacagt
tcgccccaaatggcttcaagtcggaccttccgttttggccaatctgatgatgtgccacag
accagctcagatctcggccagcttgcagctcaaggaggtcttgggatgtttgacagcccc
ttgttcctagcatctcatgaagaggagtctggtggacgcagtgttcctaccacaccacta
cagttagcagccccagtcttctctgaggtagttccatcagacactgttgagcaggcctct
cagtcggttcctatggtgagcacgtccactcctgggctcctcacggcaggcacagccagt
acaagcgaggagagagatgacgtctttctggagtcagaccctgataattccaggccaagt
gctgagagttcggtggatgctgtgatatctcaagatgatttggtggagcccagtcagccc
tccgacacggccagcttgccgtccaccagccaggagccttcctccagctctgcggatacc
agcagtgctccaagcagggctgcacccagcaggcagctgcagcgttggccaggaagccac
ggtgggcgcgtgaagagaggaggacaagcgtttccttcccgaggagttcatggcagacgc
atcgcaagatga
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integrated database retrieval system
