Syngnathoides biaculeatus (alligator pipefish): 133503499
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Entry
133503499 CDS
T09681
Symbol
rubcn
Name
(RefSeq) run domain Beclin-1-interacting and cysteine-rich domain-containing protein isoform X1
KO
K19330
run domain Beclin-1 interacting and cysteine-rich containing protein
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Pathway
sbia04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
133503499 (rubcn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sbia04131
]
133503499 (rubcn)
Membrane trafficking [BR:
sbia04131
]
Autophagy
Other autophagy associated proteins
Others
133503499 (rubcn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RH_dom
RUBC_PIKBD
RUN
LRRFIP
CMD
RecO_C
Motif
Other DBs
NCBI-GeneID:
133503499
NCBI-ProteinID:
XP_061681168
LinkDB
All DBs
Position
7:complement(19795831..19819607)
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AA seq
967 aa
AA seq
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MEITSDGEAAERRRELWKLLSSLKTTVEGLLSTNNPNVWSRYGGLQRLHKDMNNILSHGL
KNEQVYYKQRDYWPFVWCVRYINPQFASHVEQFSQLEPVLSTRVQSAGESYKADRWLLYS
LQVHMLSAQLKPLLRHRGHTRKYYNEDAYLLSEPHVTAMFQCLEAVEQNNPKLLAQIDTV
GLSPLNNPPCLGLLKSQSLCVLPGAGGNWRTADLAPPRESLNRRLTTSDNSLRDVAALTT
SGNMTGVSNSANTTSRTSSLGPPWVCLTKPEESKQGVMPPPGHASIPSISLSESPSPSSP
QPDTGDSGDGEFDDGPEYLAIGNRGQHSRRNTQSSTHSSETSESKDLSPQPKSMALPPPR
RSSFSEGQREPGRGSRGHTRSFSDTGIGQKLRKEMMSEDCSIKEYNPFSSQCNDPNTPTS
FYMESYGSQHSRTPDGLFRKPSEGQSLISYLSEQDFGSCADLEKENAHFSISESLIAAIE
LMKYNLRCQQDEREEEGDSDSEIQQLKQKIRLRRQQIRRNRLPPCTASQHLFTSTDSSGS
RRSSQDSSHGLLDSDSAEEVEECELQDGCEGQSLLVVSQNGLSLSLASLFSVMPAEGLLS
YLYSCHPSSQADIKRSISSSNKSFLSSESISTSFLQSNSAESVAMGLLRQFEGMQLPAAS
ELDWLVPEHDAPQKLLPIPDSLPISPDDGEHADIYKLRIRVRGNLEWAPPRPQIIFNIHS
PPKRKIVVAKQNYRCAGCGTRIDPDYIKRLRYCEYLGRYFCQCCHENAQAVVPGRILMKW
DFSKYYVSNFARDLLSKIAGDPLFNPNDINSSLYKKVKALESVRVLRMQLFHMKNLFKTC
RFSKEVLEQFDILPGHLTEDLHLFSLNDLSAMRNGELAPRMKELLKLGTVHVAGCVLCQA
KGFVCEFCGNEKDIIFPFQLSKCQRCEECHACYHRSCFRITKDCPRCQRLADRREKMEQQ
EDEGGGI
NT seq
2904 nt
NT seq
+upstream
nt +downstream
nt
atggagataacgtcggacggagaggcggcggaacgcaggcgagagctctggaagttgttg
tccagtctgaagaccacagtagagggcctcctgtccacaaacaaccccaacgtttggtcc
cgctacggaggccttcagcgcctgcacaaggacatgaacaacattctcagccatggactg
aagaatgagcaggtttattacaagcagagagactactggccatttgtgtggtgtgttcgt
tacatcaaccctcagtttgcctcacatgttgaacagttcagtcaactggagcctgtactg
agcaccagggtgcagagtgctggtgagagctacaaggctgaccgctggctcctttacagc
ttgcaggtccacatgctgtcagctcagctgaaacctctgcttaggcatcggggacataca
agaaaatactacaacgaggatgcctacctgctcagcgagccacatgtcaccgccatgttc
cagtgtcttgaagctgtggagcagaataaccccaaacttttagcccaaatagacacagtg
gggctctcccctctcaacaacccgccgtgccttggcctgttgaaaagccagagcctgtgt
gtgttgcccggggctggcgggaactggcgaactgctgacttggcacctccaagagagtct
ttaaaccggaggctcaccacatctgacaactcccttagagatgtggctgccttgaccacc
agtggcaacatgacaggagtcagcaatagcgcaaatactacctcacgaaccagcagcctt
ggtcctccctgggtgtgcttgaccaagccagaggagagcaagcagggtgtgatgccccct
cctggacatgcgtccataccatccatctctctttcagagtctccctcaccttcctcccca
caacctgacacaggagattcaggcgatggcgaatttgatgacggtccagagtatttggcc
attggtaatcggggccaacacagtcgccgaaacactcaaagctccacacacagcagtgag
accagcgagagcaaggacctgtccccacagccaaaatctatggctctacctccacctagg
cgctcatctttttcagagggccagagagaaccaggccgagggtctcgaggacacacccgg
tcgttttccgacacagggattggccaaaaactcaggaaagaaatgatgagcgaagactgc
agcattaaggagtacaaccctttctcatcccagtgcaatgaccccaacacgccgacttcc
ttttacatggaatcttatgggtctcagcacagcaggacaccagatggtttgtttaggaag
ccatcagagggccagagcctcatcagctacctgtcagagcaggactttggcagctgtgct
gaccttgaaaaggagaacgctcattttagcatctccgagtctctcattgcggccattgag
ctgatgaagtacaacctgcggtgtcaacaggacgagagggaagaggaaggggacagtgac
tcagagattcagcagctcaagcaaaagatccgcctgcgaaggcagcagatccgtcgcaac
cgcttaccgccctgcacggcttcccagcacctgttcacttcgactgatagcagtggttca
aggaggagctcccaggactccagtcacggcctattagattccgactctgctgaagaggtg
gaggagtgtgaactgcaagatggctgtgagggtcagtccctgctggtggtgtctcagaac
ggcctctccttgtcacttgcctccctcttctcagtgatgcctgcagagggactgcttagt
tatttgtatagctgccatccatcctctcaagcagacataaagcgcagcataagctccagc
aacaagtcatttctgagctctgagtcaatttccacctccttccttcaatccaactcagcg
gagtcggttgccatgggtttgctccgacagtttgagggcatgcagcttcctgccgcctct
gagcttgactggctggttccagaacatgatgcgccacagaaactgctgcccatcccagac
tctctgcctatctccccggatgatggagaacatgcagacatctataagctaaggattcgc
gtacgagggaacctggagtgggcaccgccccgaccacaaatcatcttcaacattcactct
ccacccaagaggaagatagttgtggcaaaacaaaattaccgctgtgctggctgcggcact
cgcatcgacccagattatattaaaagactacgttactgcgagtaccttggtcgttacttc
tgccagtgctgccacgagaatgcgcaagcggtggttcccggtcgaattctcatgaagtgg
gacttcagcaaatactacgtgagcaactttgcccgtgatttgctgagcaagattgcggga
gacccactctttaatccaaatgacatcaacagcagcctctacaagaaagttaaagctctg
gagtctgttagggttttgagaatgcagctatttcatatgaaaaacctcttcaagacgtgt
cgattttcaaaagaggtccttgagcagtttgacatccttcctggtcacttgaccgaggac
cttcacttgttttccctaaatgatctctcggccatgcgcaatggagaattagccccccga
atgaaggagctgcttaaacttggaactgtgcatgtagcgggctgtgtgctgtgccaggca
aagggcttcgtgtgcgagttctgcggcaacgaaaaagacatcatctttccctttcaactg
agcaagtgccagcgctgcgaagagtgtcatgcttgttaccaccgcagttgcttcagaatc
acgaaggactgcccccggtgtcagaggctggccgatcggcgagagaagatggagcaacaa
gaggacgagggtggcggaatttag
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