Syngnathoides biaculeatus (alligator pipefish): 133503607
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Entry
133503607 CDS
T09681
Symbol
cilp2
Name
(RefSeq) cartilage intermediate layer protein 1
KO
K24436
cartilage intermediate layer protein
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
sbia04990
]
133503607 (cilp2)
Domain-containing proteins not elsewhere classified [BR:
sbia04990
]
Thrombospondin domain-containing proteins
Other thrombospondin domain-containing proteins
133503607 (cilp2)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
CILP_C
CILP_8th
CILP
CILP_5th
Mucin2_WxxW
TSP_1
Ig_3
Ig_2
CarboxypepD_reg
I-set
TSP1_spondin
CarbopepD_reg_2
TSP1_ADAMTS
ig
Motif
Other DBs
NCBI-GeneID:
133503607
NCBI-ProteinID:
XP_061681353
LinkDB
All DBs
Position
7:complement(3111562..3132504)
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AA seq
1249 aa
AA seq
DB search
MSGLKTAAFLLAFLASVALGQELRRASASVRNRRATPKSFTDTRMTGLTEWTSWFNIDHP
GGNGDYERLEAIRFYYRERVCSRPTAMEVRTTDWVAAADTGEVVHSSLEKGFWCINKEQP
YGRTCSNYHVRFQCPPEQSFWSEWGEWGPCSTTVCNDVGIQVRQRKCMSSQPMPLVLVPA
CQGHHSERKECSNPPCTAKWSPWGPWASCSVTCGGGRRIRRRTCMRTSETVECTGRPAET
QKCGKNPCPAKCQRVCAEGRPDDDCSRCVCDGHVLHGDVHSVTGVPVAGALVAFASRPKV
IRARTDPKGHFRLKGICSSNVTSLIVRKDKFAPVTVSSTSNSTGLSWVSAVLRSAEKPYM
VKHPEDKVRYEGGRALLCCKATGSPPPDKYYWYHNGTLLDRKVYKYQEELVLKDLKPEQA
GQYYCKTSSSAGSIKSSPASLTVIEKGAPACNSTPEAHLIRLPLDCVQPGTNSKFYNAGR
CPHNKCAGSLDFDMRCRDGAGFCCGVQAMESRAIDCGSYSLPIRSVSECSCQKCVQPTVL
VRGRVVTADNGEPLRFGHIYIGKERVGTTGYQGGFTIQVTPDTQRLVVNFVDPTEKFIDT
PKVFILDKKGGSIYHEVKVMRKQAPIDIEAGETNAINLGEIEGEDPIGQLVIPANSFHKD
SGEIYEGTVKASVTFIDPRNITTASATPGDLNFVDTEGDMLPLRTYGMFSVDFRDESNKE
VLGAGAVQVLLDTQHVKMQEHIPKMKLWSLNPDTGVWEEEGDFSTTTTTSGHGRSKREER
TFLIGNMEIRERRLFNLDVPENRRCYVKVRAYMSDKFLPVEQLEGVVISLINLEPKPGYS
SNPRAWGRFDSVITGPNGACLPAFCDAQRPDAYTAYVTAMMGGEELEAAPSSPKMNPNII
GVSQPYLDKIDYQRSDHEDPALKKTAFRINLAKPNQNNLDETNGPIYPYQNLIACENAPV
DANHFRFFRVEKDKYEYNVVPFEETDLTTWTGDYLSWWPNPQEFRACFIKVKVHGPKEVM
VRSRNLGGSHPQTKGQLYGIRDIRSTRDMREANTSAACVEFKCSGMLFDQAEVDRSLISI
IPQGNCRKIATNNLLQEYLIKHPPVAQNNDSHAFTMLAPVDPLGHNYGIYTVTDQNPRVA
KEIAIGRCFDGTSDGFSREMKTDSGVALTFSCPERKINRESLFQRLQTNPGQTLSQMARD
MREMEGMQVQRSSTRVVAYPSEQQGWTQGRRVVTTTSRRRTAVRTQQRQ
NT seq
3750 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggattaaaaactgcggccttcctgctcgctttcctggcttccgttgctctcggt
caagaattgagaagagcgagtgcatcagtcaggaacagaagagcgacaccaaagagtttt
acagacactcgcatgacaggtctgacagagtggacatcttggtttaacattgaccacccc
gggggaaacggggactacgagcgcctcgaggccatccgcttctactaccgggaaagggtt
tgctcgaggcccacggcgatggaggttcgcaccacggactgggtggcggcggcagacacg
ggagaagtggtccactccagtctggagaagggcttctggtgcatcaacaaggagcaaccc
tacgggcgaacctgctccaactaccacgtccgatttcagtgcccaccagagcaaagtttc
tggagcgaatggggcgagtggggtccgtgctcgacaaccgtttgcaacgacgtcggcatc
caggtccggcagaggaagtgcatgagctcgcagccgatgcctttggtcttggttcctgcc
tgccagggccaccattcagagaggaaggagtgctccaaccctccatgcacggccaagtgg
agtccgtggggcccttgggcgtcttgttccgtgacatgcggcgggggtcggaggatccga
aggaggacttgcatgaggacctcggagacggtcgagtgcaccggacgtcctgctgaaact
cagaaatgtggcaagaatccatgtccagccaaatgtcaacgcgtgtgcgccgagggtcgc
cctgacgacgactgcagccgctgcgtgtgcgacggccacgttcttcacggcgacgtccac
agtgtgacgggggtccctgtggcgggggctttggtcgcattcgctagccgtcccaaagtc
attcgtgctcggacggatccgaaaggccacttcaggctgaagggaatctgctcgtccaat
gtcacttcgctcattgtcaggaaggacaagtttgcccccgtcaccgtctcctccaccagt
aacagcacaggcctgtcttgggtgtcggctgtcctcagatctgctgagaagccctacatg
gtgaagcaccccgaggacaaggtgcgttacgagggcggccgcgcgctgctctgttgcaag
gcaacgggatcgccaccgcctgacaaatactactggtaccacaatggtactctgctggac
agaaaggtgtacaagtaccaagaggagcttgtactgaaggacctgaaaccagagcaggct
ggacagtattattgcaaaaccagcagctctgcaggcagtattaagtcttccccagcatcc
ctcactgtcattgaaaaaggagctccggcgtgcaattccactcctgaggcacatctgatc
agactgccgctggattgcgtacaacctgggacgaactccaagttttacaacgccggccgc
tgccctcataacaaatgcgctggctctctagacttcgatatgcgctgcagagatggagcc
gggttctgttgcggtgtccaagcgatggaaagtcgggcaattgactgtggcagctacagc
ctcccaatccggtctgtgtctgagtgcagctgtcagaaatgtgtgcagccaactgtgctg
gtgcgtggacgggtggtcacggctgacaacggcgagccactgcgatttggtcacatctac
atcggcaaagagagggtgggcaccaccggataccaaggaggtttcaccatacaagttact
cccgacacgcagagattggtggtgaattttgttgaccccactgagaaattcattgacact
ccgaaggtgttcattttggacaagaagggcggatccatttaccacgaggtgaaggtgatg
aggaagcaggctccgattgatatcgaagcaggcgagaccaatgctataaacctgggggaa
atagaaggggaagacccgattgggcagttagtcattccagccaattcctttcacaaagac
agtggcgaaatctatgagggaactgtaaaagccagtgtcactttcatagacccaagaaat
atcaccacggcttctgcaacccccggcgacctcaactttgtggataccgagggggacatg
ctccctttgaggacctacggcatgttctcggtcgacttccgtgacgagagcaacaaggag
gtgcttggagccggagcggtccaagtccttctcgacacgcagcatgtcaaaatgcaagag
cacattcctaaaatgaaactgtggtctttgaatcccgacacaggagtttgggaggaggaa
ggcgacttctctaccacgacgactacaagtgggcacgggcggagcaagcgtgaggagcgc
accttcctcataggcaacatggagatcagagaacgtagactcttcaatttggatgtgcct
gaaaacagacggtgctatgtgaaagtccgtgcctacatgagtgacaagttcctgcctgtt
gaacagctggaaggggttgtgatcagcttgataaaccttgaacccaagcctggatattcc
tcaaatccgagggcatggggtcggtttgacagcgtcataaccggtcccaacggggcctgt
ttaccggcgttctgcgatgcccagaggcctgatgcctatacagcatatgtaacagcgatg
atgggtggtgaggaactggaggctgctccctcctccccaaagatgaatccaaatattatc
ggggtgtctcagccttatctggataaaatagactaccagcgctcagaccatgaagatcca
gctctgaagaaaaccgccttcagaatcaatctagcaaagcctaaccaaaataatctcgat
gagactaatggacccatatatccatatcagaatttaatagcatgtgaaaatgctccagtc
gatgcaaatcatttcagattctttagggtggaaaaagacaaatatgaatacaacgttgta
ccctttgaagagactgatctgacaacctggacaggggactacttatcatggtggcctaac
cctcaggagttcagagcatgcttcatcaaggttaaggtgcacggaccaaaggaagtgatg
gtcaggtcgagaaacttgggaggatcacacccacagacgaaaggccaactttatggcatc
cgagatatacgcagcactcgggatatgcgagaggccaacacttccgcagcttgtgttgag
ttcaaatgcagcggtatgttgtttgatcaagctgaggtggatagatccctcatctcgatc
attccacaagggaactgtcgcaagatcgctaccaacaaccttctacaggagtacctcatc
aaacacccgccagttgcacaaaacaacgactcccatgctttcaccatgttggctcctgtg
gatcctctgggacacaattatggcatatacacagtcacagaccagaatccgagggttgct
aaagaaatcgccatcggccgctgctttgatgggacctcggacggtttctccagagagatg
aagacggactcgggagtcgctttgaccttcagctgtccagagaggaaaatcaacagagag
agcctcttccagcgactgcagaccaacccaggacagacactgtcacagatggcgagggac
atgagggagatggaaggcatgcaggtgcagaggtcatccactcgagtggtggcctatccc
tccgagcaacagggctggacccagggtcgtagggttgtcactacaacaagcaggaggaga
acggctgtgcgcacacagcaacgccaatga
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