Syngnathoides biaculeatus (alligator pipefish): 133503641
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Entry
133503641 CDS
T09681
Name
(RefSeq) E3 ubiquitin-protein ligase RNF220-like
KO
K25174
E3 ubiquitin-protein ligase RNF220 [EC:
2.3.2.27
]
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sbia04121
]
133503641
Enzymes [BR:
sbia01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
133503641
Ubiquitin system [BR:
sbia04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
133503641
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
RNF220
zf-C3HC4_2
zf-C3HC4_3
zf-C3HC4
zf-RING_5
zf-RING_2
Pox_A_type_inc
zf-RING_UBOX
zf_C2H2_ZNF598
zf-ANAPC11
Motif
Other DBs
NCBI-GeneID:
133503641
NCBI-ProteinID:
XP_061681422
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All DBs
Position
7:complement(22681579..22720379)
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AA seq
560 aa
AA seq
DB search
MDLHRPFKMDSSSYMPAPLASPALMVLASTAEAGRDASVPCQAPRPFGVPTSVEKDLHLP
FPSASYTFASMYQRQGPVSGAFPGRDFPASLLHLHPQFTPPNLDCSTLGMLHHSGVSGAF
RPFSSPHDEREPIGYHSAFTPAKRLKSCFSEVEGKEFDFGSPGGTIKAGEDSARKLFSMS
GLLSDGEASSSPEERREHSGKVKVLYDAGAPVCPVCQSVLRPGELKEHMEQELAKLSQIQ
ISVTSVQHDHLMRTPKSLSFSLHIKHEVASPTSSPRSADDIHSDRYQTFLRVRANRHTRL
NVDDLCWCRCYVKSAPLRSHSAGAQLDCTQAVRISKLKRRKPEDGQEVPADTTPSEDEWN
ERRKIQMMSLVGRFKGSMLVSSTSKDGRDSDADLDVDGDDTLEYGRAQYTETDVIMCSGD
NIKETAANVGALPDSGVHRKISKLPHEEIPSTSSGDKLEGSALVLPKTCKNVGVDMLSED
SVLTSLDALKARIRDLEKQLCKGDRFKCLICMDTYSTPLTSIQCWHVHCEECWLRTLGAK
KLCPQCNTITSPGDLRRVYL
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atggacctccaccgccccttcaagatggacagctcctcctacatgccagctcccctcgct
tcccctgcgctcatggtcctcgcctccaccgccgaggctggccgagatgcttcggtcccc
tgccaggcacccaggcccttcggggtccccacttcggtggagaaagacctccacctcccc
ttcccctcggcatcctacaccttcgcctctatgtatcagcgccagggcccagtgtcgggt
gcctttcctggccgagacttcccagcctccctgctccacctgcaccctcagttcacgccg
ccgaacttggactgctccaccctggggatgctccaccacagcggggtcagcggcgccttt
cggcctttctcttcaccacatgatgagagggagccaatcgggtaccactcggccttcacg
cctgccaagaggctgaaaagttgtttctcggaagtggagggcaaggaatttgactttggc
tcccccggaggcaccattaaagctggagaagactcggcgaggaagctgttctccatgtcg
ggcctgctttctgatggtgaggcttcttccagcccggaggagcggagggagcacagtggc
aaggtaaaggtgttgtacgatgccggggctccagtgtgtccagtgtgccagagtgttcta
cgaccaggggagctgaaagagcacatggagcaggaattagccaaacttagccagattcaa
atcagcgtcacttcggtgcagcacgaccacctcatgaggacaccgaagtccctttcattc
tctctgcacatcaaacacgaagtagcttctccaacctcatcccctcgatcggctgatgac
atccactctgaccgatatcagacatttctgcgtgtacgggccaacagacacacaagacta
aatgtcgacgacctctgctggtgcaggtgctacgtcaaatctgccccattacgctcccac
agcgcaggagcccaactagactgcacacaagctgtcagaatcagcaaactgaagcggagg
aaaccagaggacggtcaggaggtccctgcagacacaacaccatcagaagatgagtggaat
gaaaggaggaagatacagatgatgtcgctagttggaaggttcaaaggttcaatgttggtg
agcagcacgtctaaagatggtcgggacagcgacgcggacctcgacgtagacggagacgac
accttagagtacggccgagcccaatacaccgagactgacgtgatcatgtgctctggagac
aacatcaaggagacggcagccaatgtcggtgcactgccagactccggagtccaccgaaaa
atttccaaattgccacatgaagagattccgtccaccagcagtggcgataaactggaagga
agcgcacttgtcctccccaaaacctgcaaaaacgttggcgtagacatgctttcagaagat
tctgtgctgacatctctagatgctcttaaagctcggatacgagatttggagaaacaattg
tgtaaaggagacagatttaaatgcctcatctgtatggacacttactcaaccccacttact
tccatccagtgctggcacgttcactgcgaggaatgttggctcagaacgctaggagcaaag
aagctgtgccctcagtgcaacaccatcacctcgcccggcgacctgaggagggtctatctg
tga
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