KEGG   Syngnathoides biaculeatus (alligator pipefish): 133503736
Entry
133503736         CDS       T09681                                 
Symbol
sem1
Name
(RefSeq) 26S proteasome complex subunit SEM1
  KO
K10881  26 proteasome complex subunit DSS1
Organism
sbia  Syngnathoides biaculeatus (alligator pipefish)
Pathway
sbia03050  Proteasome
sbia03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:sbia00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03050 Proteasome
    133503736 (sem1)
  09124 Replication and repair
   03440 Homologous recombination
    133503736 (sem1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sbia03019]
    133503736 (sem1)
   04131 Membrane trafficking [BR:sbia04131]
    133503736 (sem1)
   03051 Proteasome [BR:sbia03051]
    133503736 (sem1)
   03400 DNA repair and recombination proteins [BR:sbia03400]
    133503736 (sem1)
Messenger RNA biogenesis [BR:sbia03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX-2 complex
     133503736 (sem1)
Membrane trafficking [BR:sbia04131]
 Exocytosis
  Tethering complex
   Exocyst complex assembly proteins
    133503736 (sem1)
Proteasome [BR:sbia03051]
 Eukaryotic proteasome
  Regulatory particles
   PA700 (19S proteasome)
    non-ATPase subunits
     133503736 (sem1)
DNA repair and recombination proteins [BR:sbia03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Other HR factors
     133503736 (sem1)
SSDB
Motif
Pfam: DSS1_SEM1
Other DBs
NCBI-GeneID: 133503736
NCBI-ProteinID: XP_061681626
LinkDB
Position
1:complement(8196465..8200375)
AA seq 70 aa
MSDKKQTVDLGLLEEDDEFEEFPAEDWTGLDEDEDAHVWEDNWDDDNVEDDFSNQLRAEL
EKHGYKMETS
NT seq 213 nt   +upstreamnt  +downstreamnt
atgtcggacaaaaaacaaaccgtcgaccttggtctactggaggaggatgacgagtttgag
gagttcccagccgaggattggacagggctggacgaggatgaagatgctcatgtttgggaa
gacaactgggacgacgacaacgtcgaggatgatttctccaaccagttaagagcggagctg
gaaaagcatggttacaagatggagacgtcgtag

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