Syngnathoides biaculeatus (alligator pipefish): 133503738
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Entry
133503738 CDS
T09681
Symbol
rexo1
Name
(RefSeq) RNA exonuclease 1 homolog
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Pathway
sbia03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
133503738 (rexo1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sbia03009
]
133503738 (rexo1)
Ribosome biogenesis [BR:
sbia03009
]
Eukaryotic type
Pre-60S particles
RNases
133503738 (rexo1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EloA-BP1
Motif
Other DBs
NCBI-GeneID:
133503738
NCBI-ProteinID:
XP_061681624
LinkDB
All DBs
Position
7:16106387..16134800
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AA seq
1223 aa
AA seq
DB search
MLRSTGFFRGLDCPFYTEYTEGSGNGCNRPYCHFRHKRQNYGASVEPKKLHAAQKEQGYD
PYKPEVVRPQEHQNGTSPHSGDITGALEIVNKAIEEVRNEVEREKKKLSRIGDEPYIPSG
RTSASYADNGKGQTPGKHLAYDPGSYQMTSGGYNPTPSCSKYTLDSDSRGSSSNSMEYVP
TSLKKNPSRTHTQAVPTPPPSPKYSTTSSSMCKYTVDTSRPSTDMEYDPLSNYSAGIAVK
RKWDGSTCNISEEVKKTHRLPISDDAIVPIGKKVEQQHVDTNKYTFSDSDGESSGTEYRP
TSLSSLQQRKANSVTKVGDNVEKERKESGKGTLQALSQSNKEDLETREHLQQKSCQEKKK
VKIDKSEKAKDGQTSLNRKSIKEKGKESQKKSHQDSTKKENKSHSKNDDRKKSVKVKTPD
KVTKEHKRGDQKVNSKPNSSDSSERHKVTEINAGESRKSKILDKEQSKQNERKHKNGQLN
VSKRHKDEKKLKKRSATSATSKVSSAISKGKTKHSISPKCMKSLELKQRTLNLSHADLFG
DESAEEAEPIVVDDSNEELEEVPVRKCADALKRGGLNKRKASELTLSSSEDEDDKASEGG
GIDKDAALDLSIFQDELDFGTDPMEECLRIFNESKDVKKENKGRQAKQPSRDSEDDNTES
TLTTLFPGQKKRVSHFVSKGNTDAPSKNVVRPYRRPTAQEVCYQRMQMAQQQAAQLSASV
KVPSQSSPSPSSSGERKRIAHRPNPLTISSKTSTSDTKTAGSLPVRTQTTAGILSKTTST
TAQKRVAHTPTMKSSSMTRPIIPSEFGAKIPTIIRQRYLNIFIDECIKFCPSEDVAFQMG
LVEEKLVYERSNTKKIYLNVAVNTLKKLRNKSSSCSSSVLKEASLPPSRKAQSHEDVLGG
RLAATTSFTVNRMGKQQEENLNGAVLYQKLKAYLMTEEQLQEHGYPRINPNALGKAVVYN
LPEKKVILDPFTKICCRCGAEYKVNVKGNCLRKEECAFHWGRLRRQKVAGSWETMYSCCS
GAVGSPGCQLAQQHVQDGRKESLDGFVTTFSKALPRDGNGGVFALDCEMCYTKQGLELTR
VTVINSDLKVIYDTFVKPESKVVDFNTRFSGVTAEDLDGATITLRDVQAVLLSMFSAESI
LVGHSLESDLLALKLIHSSVVDTALVFPHRLGLPYKRALRNLMADYLKRIIQDSVDGHDS
SEDASACMELMIWKLKEDAKVKR
NT seq
3672 nt
NT seq
+upstream
nt +downstream
nt
atgctgagatcaaccggcttcttccgtgggcttgactgtccgttttacacggaatacacc
gagggcagcggcaatgggtgcaacagaccctactgtcacttcaggcacaaacggcagaac
tacggagcttcagtcgaacctaagaagcttcacgccgcccaaaaagaacaagggtatgat
ccctacaaaccagaagttgtgagacctcaagagcatcagaatggaacatcacctcactca
ggagacatcaccggtgctctggagattgtcaacaaggcaatcgaggaggtccgcaatgag
gtggagagggagaagaagaagttgtctcggattggggatgaaccgtatattcccagtgga
agaacaagtgcgtcttatgctgataacggtaaaggtcaaacaccagggaaacacttggct
tatgatcctggaagttatcaaatgacgtcaggaggatataaccccacccccagttgcagc
aagtacactttggattcagacagtcggggaagcagtagcaattccatggagtatgttccc
acttcgttaaaaaagaatccatctcgaacacacacacaagcagtccccactcctccccca
agtccaaagtactccaccacatcttcctcaatgtgtaaatacactgtggatacttcaagg
ccatctacagacatggaatatgacccactttccaactactctgcagggattgcagtgaag
cggaagtgggatggcagcacgtgcaatattagtgaggaggtcaaaaagacacacagactc
cctatatcagatgatgccattgtcccaattgggaaaaaagtagagcagcagcatgtggac
acaaacaagtacacattctctgattctgacggggagagctccggaacggagtacagacct
acctcgcttagtagtctgcagcagagaaaggccaacagtgtgacaaaagttggagacaat
gtggagaaggagaggaaagagagtggtaagggtacccttcaagcactgtcacagagtaat
aaggaggacttggagacacgggaacatttacagcaaaagagctgccaagagaaaaagaaa
gtaaaaattgacaagtctgagaaggcaaaagacggccaaacatctcttaatcgaaaaagt
atcaaggaaaaggggaaagagtcacaaaagaagtctcaccaggactctacaaaaaaggaa
aacaaaagtcattcgaagaacgatgatcgaaagaagtctgttaaggttaagactcccgat
aaggttactaaagagcacaagagaggtgatcaaaaggtgaattcgaagccaaattccagt
gactccagcgaacgacataaggtcacagagataaatgcaggggaaagcaggaagtccaag
attttagacaaggagcaaagcaagcagaatgagcggaaacacaaaaacggtcagctgaat
gttagtaaaagacacaaggatgaaaagaaattaaagaaaagaagcgcaactagcgctacg
agcaaagttagttctgcaatcagcaaaggtaaaacgaaacacagcatcagcccgaaatgc
atgaaaagcctggagttgaaacaaagaactctgaatctgagtcatgctgacctttttggg
gacgagagtgcggaggaggcagaaccgatagtggtggatgatagcaatgaggagctggaa
gaagtgccggtaaggaaatgtgctgacgctttgaagaggggaggactaaataagaggaaa
gcctcagagctgactctgtcttcctctgaggatgaagatgataaagcttcagagggggga
gggatagataaagatgctgcgttggacttgtcaattttccaggatgagttggactttggg
acagatcccatggaggagtgtttgcggatctttaatgaatcaaaggatgtcaagaaggaa
aacaagggaaggcaagctaagcagccctccagagattcagaggatgataacactgagagc
actttaaccactctcttccctggtcagaagaagagagtgtctcactttgtttccaaagga
aatactgatgcaccttcgaagaatgtggtccggccatacaggagacccacagctcaggag
gtttgctatcaacgcatgcagatggcgcagcagcaagctgctcagctttctgcttcagtc
aaagtgccgtcacagagctcacccagccccagctcttcaggagaaaggaagaggattgca
caccgccccaacccattgacgatatcctcaaagacaagtacttcagataccaaaacagct
ggtagcctgcctgttcggacccaaaccacagctggtatcttatcaaagaccacgtccacc
actgcgcaaaaacgagtggctcacacacccaccatgaagagttcttcaatgacgcgtccc
atcatcccctctgaatttggagctaaaatcccgaccattattcgccaacgctacctcaac
attttcatagacgagtgcatcaaattttgcccatcagaagatgttgccttccagatgggc
cttgttgaggaaaagctggtgtatgaacgcagtaacaccaagaaaatctatctcaatgta
gctgtaaacacgctgaaaaagctccgcaacaaaagtagctcctgctcctcgtcagtcctc
aaggaggctagtttaccaccttcccgcaaagcacagtcacatgaggacgttctcggaggc
cgtcttgcagctacgaccagttttactgtcaataggatgggtaaacagcaagaagagaat
ctcaatggagctgtgctctatcaaaagctgaaggcctacctgatgacagaggagcagctg
caagagcatggataccctcgaattaaccccaatgctctaggaaaggctgttgtatacaac
ctcccagaaaagaaagtcatccttgacccattcactaagatatgctgcagatgcggtgct
gaatataaagtcaacgtcaagggtaactgtctccgcaaagaggaatgtgcctttcactgg
ggacgtttgcgcaggcagaaagtggctggaagctgggagaccatgtatagctgctgctca
ggggctgtgggctctccgggctgccaattggcccagcaacatgttcaggatggacgtaaa
gagtcactggatggctttgtgacaactttcagcaaagctctcccacgagatggcaatgga
ggtgtttttgccttggattgtgagatgtgttacaccaagcaaggcctggagctgacgaga
gtaacagtcataaactcggatttaaaagtaatctacgacacatttgttaaacctgagagc
aaagtggttgactttaacacacgattttccggtgtgaccgcagaagacttggatggtgcc
accatcaccttgagagatgttcaggctgtgctcctcagtatgttcagtgctgagtccatc
ctggtaggacacagcctggaaagtgacctcttggctctcaagctcattcacagttcagtg
gtagacacagcccttgttttccctcaccgacttggtttaccctacaaacgtgccttgagg
aacttgatggccgactacctcaaacgcatcatccaggacagtgttgatgggcacgactca
agtgaagatgcctccgcctgcatggaattgatgatatggaagctgaaggaggatgcaaaa
gtcaagagatga
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integrated database retrieval system
