Syngnathoides biaculeatus (alligator pipefish): 133503767
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Entry
133503767 CDS
T09681
Symbol
med16
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 16
KO
K15159
mediator of RNA polymerase II transcription subunit 16
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sbia03021
]
133503767 (med16)
Transcription machinery [BR:
sbia03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
Tail
133503767 (med16)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Med16_bridge
Med16_N
Med16_C
WD40
Beta-prop_WDR3_1st
Beta-prop_IFT140_1st
WD40_WDHD1_1st
ANAPC4_WD40
Beta-prop_THOC3
Beta-prop_WDR35_TULP_N
Beta-prop_IFT122_1st
WD40_CDC20-Fz
Beta-prop_WDR5
Beta-prop_EML_2
Beta-prop_HPS5
WD40_Prp19
DSE1_N
WD40_MABP1-WDR62_2nd
Motif
Other DBs
NCBI-GeneID:
133503767
NCBI-ProteinID:
XP_061681676
LinkDB
All DBs
Position
7:11773886..11786891
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AA seq
837 aa
AA seq
DB search
MELAYVCDWERRPKNTHCPSIPLVCSWSCRNLVAFTTDLKNDDGGDPGVSHVIHIMDTEH
PWDVYSIRSGHAEVISCLEWDQSGSRLLSADGDGHIKCWSMSEHLVNSWDSVLSSSLEGD
PIVALSWLHNGVKLALHVEMSGSTNFGEKFSRVKFSPSLTLFGGKPMEGWLAVTVSGLVT
VSLLKPGGALLTASESLCRLRGRVALADIAFTGGGNIVVAATDGSSSSPVQFYKVVVSVV
SEKCRIDTELLPSLFLRCTTDPMRRDKYPAVTHLKFLTRENSEQVLLCASHQSGSIVECW
SLRKEGLPVNNIFQHRSPVVGEKQPTILKWRILTTTNDLERVSAIALPKLPISISNTDLK
VASDTKFCPGLGLALAFHDGTIQILHRLSLHTMGIFYGSTSASSAGPGQRPGEESAIKRQ
RTGAPGLHFKALQFSWTSLALAGVDNHGKLHMLRVSPSMGQVLEMNTTLRHLLFLLEYCM
VTGYDWWDVLLHVQPGMVHNLVDRLHEEYMRQNQALQQVLATRIVAVKASLCKLSTATAA
RACDFHAKLLLIAISSTLKSLLRPHVLNTPDKSPGDRLSEICAKNLDLDIDKVMINLKTE
EFVLDGPPLQSLQQLIQWVGDFVLYLLANLPNQGSVVRPGFGFMRDAASLGLLREMLVMI
RIWGLLKPGCLPTFTATSDSQDSLQLLFRLLTKLWLCCRDDAPPQDPDESLIDECCLLPS
QLLVPGMDWLPVNDGVIVKLQGKQPIRLYFGKAAVLPTLDGAGRNAGCQRTDNLRCVHMG
VCPTEDSKACTRCGCVTMLRSPNKSNAMKQWEQRWIKNCLCGGLWRRIPPTLASTSS
NT seq
2514 nt
NT seq
+upstream
nt +downstream
nt
atggagttggcgtatgtatgcgactgggagaggcgtcccaaaaacacccactgcccctcc
atccctctggtctgctcgtggtcctgcaggaacctcgtggccttcaccacagacttgaag
aacgacgatggcggcgacccaggtgtcagtcacgtgatccacatcatggacacggagcat
ccctgggatgtctactccatcaggtcgggtcatgctgaggtcatttcctgtctggagtgg
gaccaatcaggatcaaggttgctgtcagcagacggcgacgggcacatcaagtgctggtcc
atgtctgagcacttggtcaacagttgggacagtgttctgagcagttctctggagggggat
cccatcgtggcgctgagttggctgcacaatggcgtcaaactggctctgcacgtggagatg
tccgggtccacaaatttcggcgagaagttctcccgcgtcaagttctctccatctcttact
ctctttggcgggaagccgatggagggctggctggcggtgactgtgagcggtctagtgact
gtgtcgctgctcaagcccggcggtgctctgctcacagccagcgagagtctgtgccgcttg
cgaggacgcgtggcactggccgacattgccttcacgggaggcggcaacatcgtggtggcc
gccaccgacggcagcagttcttcgcccgtccagttctacaaggtggtggtgagcgtggtg
agcgaaaagtgccgcatcgatacggaacttctgccgtccttgttcctgcgctgcaccaca
gacccgatgcggcgggacaagtaccccgccgtcacgcacctcaagttcctgaccagagag
aactctgagcaggttctgctatgcgcgtcccatcagagcggcagtatcgtggagtgttgg
tcgctgaggaaggaggggcttcccgtcaacaacatcttccagcatcgatctcccgtcgtg
ggcgagaagcaacccaccatcttgaagtggaggatcctgaccaccaccaatgacctcgag
agggtgtctgccatcgctctccccaaactgcccatttccatctcaaacactgacctgaag
gtagcgtctgacaccaagttctgtcccggactgggtctggctctggcgttccacgacggc
actatccagatcctccaccgcctgtctttgcacaccatgggcatcttctacgggtccacc
tccgcctcctccgccggtccaggccagcggccgggggaagagtcagccatcaagcggcaa
agaaccggggcgcccggcctccatttcaaggccctgcagttctcctggacctcgctggcc
ctggctggagtcgacaatcatggcaagttgcatatgctgcgagtgtccccctccatgggt
caagtgctggagatgaacacgacgctgcggcacctgctgttcttgctcgagtattgcatg
gtgactggctacgattggtgggacgtgctcctgcacgtgcagcccggcatggtccacaac
ctggtggaccggctgcacgaggagtacatgaggcaaaaccaggccctgcagcaggtcctg
gccacgcggatcgtggcggtcaaggcgtcgctgtgcaaactgtcgacggcgacggcggca
cgagcctgcgacttccacgccaaactgctcctcatcgccatcagctctaccctcaagtct
ttgctcagaccccacgtcctcaacaccccagacaaaagcccaggagaccgcctgagcgag
atctgcgccaagaacttggacttggacattgacaaggtgatgatcaacctgaagacggag
gagtttgtgttggacgggccccccctgcagtctctgcagcagctcatccagtgggtgggc
gacttcgtcctctatctgctcgccaacctccccaaccagggttccgtggtgcggcccggc
ttcggtttcatgcgggacgcggcgtctctgggattgctgcgggagatgctggtgatgatc
cggatctggggtctgctgaagcccgggtgccttcccaccttcacggccacgtcggacagc
caggacagtttgcagctgctcttccgcctgctcaccaaactgtggctttgctgcagggac
gacgccccaccccaggaccctgatgagagcctgatcgacgaatgctgcctgctccccagt
cagctgttggtgcccggcatggattggctccccgtcaacgacggcgtcatcgtcaagctg
cagggcaaacagccaatcaggttgtactttgggaaagcggcagtgctccccaccctggat
ggcgctggcaggaacgccggctgtcagaggacagacaacctgcgatgtgtccacatgggc
gtttgtcccacggaagacagcaaggcctgcaccaggtgcggctgcgtgacgatgttgcga
tcgcccaacaaaagcaacgccatgaagcagtgggagcagcgatggattaaaaattgtttg
tgtggaggtttgtggcgtcgcattccgcccacactcgcctcaacgtcttcttga
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