Syngnathoides biaculeatus (alligator pipefish): 133503797
Help
Entry
133503797 CDS
T09681
Name
(RefSeq) LOW QUALITY PROTEIN: thrombospondin-4-like
KO
K04659
thrombospondin 2/3/4/5
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Pathway
sbia04145
Phagosome
sbia04510
Focal adhesion
sbia04512
ECM-receptor interaction
sbia04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
133503797
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
133503797
09144 Cellular community - eukaryotes
04510 Focal adhesion
133503797
09142 Cell motility
04820 Cytoskeleton in muscle cells
133503797
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sbia04131
]
133503797
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sbia04147
]
133503797
00536 Glycosaminoglycan binding proteins [BR:
sbia00536
]
133503797
Membrane trafficking [BR:
sbia04131
]
Endocytosis
Phagocytosis
Opsonins
133503797
Exosome [BR:
sbia04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
133503797
Exosomal proteins of colorectal cancer cells
133503797
Exosomal proteins of bladder cancer cells
133503797
Glycosaminoglycan binding proteins [BR:
sbia00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
133503797
BRITE hierarchy
Motif
Pfam:
TSP_C
TSP_3
EGF_CA
COMP
EGF_3
EGF
cEGF
Motif
Other DBs
NCBI-GeneID:
133503797
NCBI-ProteinID:
XP_061681725
LinkDB
All DBs
Position
7:complement(16987902..17002379)
Genome browser
AA seq
774 aa
AA seq
DB search
MFCFALLTCLLCMGQAAGQRDGEIINQMKMSNHALSEIKELLKQMIKEMVFLKNTVMDCE
ACGEGLHHPSCVPDPCYPGARCMETPRGPSCGPCPDGMEGNGTHCTDVDECSVAPCHMGV
RCINTSPGFRCGSCPAGYTGPQLHGIGIAYAGANKQVCKDINECDSHTNGGCAENSICIN
TPGSFRCGPCKKGYVGDQRRGCKLERMCGDGQANPCHASAECVIRRDGNIECQCGIGWAG
NGFLCGPDVDIDGFPDEKLDCPETNCAKDNCLTVPNSGQEDADRDGIGDACDDDADGDGI
PNTQDNCVLVPNVDQRNIDEDDFGDACDNCAAVKNNDQKDTDVDKYGDECDEDIDGDGIP
NYLDNCKRVHNADQKDRDGDQVGDACDSCPYVPNQDQVRMLFNIYGRSKSRLSACSXHNL
TPTPTSQSDADNDLIGDPCDTNKDSDGDGHQDSRDNCPAVINSSQLDTDKDGIGDECDDD
DDDDGIPDLLPPGPDNCRLIPNPLQEDSDGNGVGNVCERDFDNDTIIDTIDVCPENAEVT
LTDFREYQTVVLDPEGDAQIDPNWVVLDQGREIVQTMNSDPGLAVGYTAFSGVDFEGTFH
VNTVTDDDYAGFIFGYQDSSSFYVVMWKQVEQIYWQANPFRAVAEPGIQLKAVKSNTGPG
ENLRNALWHTGDTSDQVKLLWKDARNVGWKDKTSYRWFLQHRPAEGYIRVRFYEGPQMVA
DTGVIIDGTMRGGRLGVFCFSQENIIWANLRYRCNDTLPEDFDTYHVQQVLLVA
NT seq
2325 nt
NT seq
+upstream
nt +downstream
nt
atgttttgttttgcgctgctgacttgtttgctctgcatgggacaagcggcaggacagaga
gacggtgaaattataaatcagatgaaaatgtcaaaccacgccttgtcggagataaaagag
cttctgaagcaaatgattaaagagatggtattcctcaagaatacagtgatggattgtgaa
gcctgtggtgaggggctgcatcatccttcctgtgtccccgacccttgttaccctggtgca
aggtgtatggagacccctcgtggtccaagttgtggaccctgtccagatggcatggagggc
aatggcacccactgcactgatgtggatgagtgctcagtggcgccgtgccacatgggtgtg
cggtgcatcaacacctcgccagggttccgctgtggttcctgtcctgcgggatacactgga
cctcagctacacggcatcggcattgcttacgccggcgccaacaagcaggtgtgcaaggac
atcaatgagtgtgacagccacacaaatggtggttgtgcagagaattccatctgtatcaac
actccgggctccttcagatgcggcccgtgtaaaaagggctacgtaggagaccagcgacgc
ggctgcaagctcgagagaatgtgcggggatggccaggcgaacccctgtcatgccagcgcg
gagtgcgtcatccgtcgagatggcaacattgaatgtcaatgcggaattggttgggccggg
aacggattcctgtgtggaccagacgtcgacattgatggcttcccggacgaaaaactggac
tgtcctgagacgaactgtgccaaggataattgtctcacagtacccaactctggtcaagag
gatgctgatcgtgatggaatcggagatgcctgtgatgacgatgcagatggagatgggatc
cccaacacacaggacaactgcgtactggtgcccaacgtggaccaaaggaacatcgacgaa
gacgactttggcgatgcttgcgacaactgcgcagctgtcaaaaataacgaccaaaaggac
accgatgtggacaaatatggtgatgaatgcgatgaagatatcgacggggatggaatcccc
aattacctggataactgcaaaagagttcacaatgctgaccagaaagatcgtgatggagac
caagttggagacgcctgtgatagctgtccctatgttcccaaccaagaccaggttagaatg
ctcttcaacatatatggccgcagtaaatcacgattatctgcctgtagctagcataaccta
acaccaactcccacttcccagtcggatgcggacaacgacctaatcggagacccttgcgac
actaacaaagacagcgatggcgacggtcaccaagactctcgagacaactgcccagccgtt
atcaacagttcccagctggacaccgacaaggacggcatcggagatgaatgtgatgacgac
gatgacgacgatggcattccggacctgctcccgccaggtcctgataactgtcgtttaatc
ccaaatcccctacaagaggactctgatggcaatggcgtaggtaatgtgtgtgaaagggat
ttcgacaacgacaccatcattgacaccatcgacgtttgtcctgaaaacgccgaggtcacg
ctgactgacttcagggaataccaaactgtggttttagatcccgagggtgacgctcagatt
gaccccaactgggtggtgctggaccaggggagagagattgtccagacgatgaatagtgat
cctgggttggctgttggttacactgccttcagtggtgttgatttcgaagggacatttcat
gtcaacacagtgacggacgacgactatgcaggatttatttttggttaccaggacagctct
agtttttatgtggtcatgtggaagcaggtggaacagatctactggcaggccaacccattc
agagccgtggcagaacctggcatccaactgaaggctgtcaagtccaacaccggccctggt
gagaatctgaggaacgccttatggcatactggcgacacaagtgatcaggtgaaacttctg
tggaaagatgctcgcaatgttggctggaaagataagacctcttatcgctggttcctccag
caccgacccgctgaaggatacatccgggtccgcttctatgaaggtcctcagatggtagcc
gacacaggtgtcattattgatggcaccatgaggggaggtcgacttggagtcttctgcttc
tcccaggagaacataatctgggccaacctgcgttaccgctgcaatgacactttaccagaa
gacttcgacacctatcatgtgcagcaggttctgctggtggcctga
DBGET
integrated database retrieval system
