Syngnathoides biaculeatus (alligator pipefish): 133503877
Help
Entry
133503877 CDS
T09681
Symbol
usp24
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 24 isoform X1
KO
K11840
ubiquitin carboxyl-terminal hydrolase 9/24 [EC:
3.4.19.12
]
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sbia01002
]
133503877 (usp24)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sbia04121
]
133503877 (usp24)
Enzymes [BR:
sbia01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
133503877 (usp24)
Peptidases and inhibitors [BR:
sbia01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
133503877 (usp24)
Ubiquitin system [BR:
sbia04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
133503877 (usp24)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ARM_UBP24_USP9X-Y
UCH
UCH_1
UCH_UBL1
UBA
DUF3517
UBA_7
UBA_RAD5A
Motif
Other DBs
NCBI-GeneID:
133503877
NCBI-ProteinID:
XP_061681835
LinkDB
All DBs
Position
7:5440032..5498740
Genome browser
AA seq
2620 aa
AA seq
DB search
METEEEQHITTLLCMGFPEPDVIRKALRLAKNDINEAVALLTNESPGLGYGYEPMESGPA
PALSTSGDGESSGRTGTGGFDPPPAYHDVVEGERSNDENGNCSSGSMEFPTTNLYELESR
VFTDHWSIPYKREESLGKCLIASTCLARHGLADADENCKRFVERCMPEAFKKLLTSSAVH
KWGTEIHEGIYNMLMLLVELVAERVKQDPVPVNLMGVLAMALNPDNEYHFKNRMKACQRN
WAEVLGDEANMFAVSPSNTYQKEPHGWLVDLVNQFGELGGFTAIQTKLNTEEIEIAYVSA
LVQPLGVCAEYLNSSLVQPMLDPVIHKMITYVQNLEEKDLKDKRLVSIPDLLSAIKLLCM
KFQRDMVTVVDDLRLDTLLRMLKTPHFSTKMNSLKEVTKLIEESTVAKTVKNAIDTDKLL
DWLVENSVLSIALEGNIDQAQYCERIKGIIELLGSKLSLDELSKIWRIQAGQSSTVIENI
HTIIAAAAVKFSFDQLTHLFVLIQKSWEVESDRVRQKLLSLIGRIGREARSETTTGKVLE
VLWELAHLPTLPTSLVQQALEEHLGILSDAYAVKETVKRNYIIKCIEDIKKTQEDQKGSD
SQSSFLTGSWGKRKSVSVKASQPSSPQAVWVVPALRQLHEITRSFIKQTYQKQDKSIIQD
LKKNFEIVKLITGSLVCCHRLAVTAAGNGCLSGSTMVDGRYTYQEYLDGHLRFLAFFLQE
ASLYLVWNRAKEIWECLVSGPDVCELDREMCFEWFTKGQHDLESDVQQQLFKEKILKLEP
YEITMNGFNLFKTFFENVNLCDHRLKRQGTQLCVERLDLSGMDFIWRIAMETPDEEIANE
AIQLIITYSYTNLNPKMKKDSVSLHKKFIADCYKRLEAASSALGGPTLTHAVTRATKMLT
ATAMPTVATSVQSPSRSTKLVIIERLLLLAERYVITIEDMYSVPRTILPHGASFNGHPVT
LHITYESTKDTFTLETHSNETIGSIRWKISEHLSCPVDNVQIFANDSVLTMNRDQKLLSQ
LGFSDEQSLTVKSSGTGTPSGSSESSASASSSSSSAVFNSAYALEQEKSLPGVVMALVCN
VFEMLYQLANLDETRITLRVRKLLLLIPTDPEVQDALDNFVPKESSVWSHQKTLFTLGQG
TGSRSPSMGSKQQHQPQPSAASILESLFRSSAPGMSTFRVLYNLEVLSSKLMPTSDDEMA
KTSSKSFCDNFLKAGGLSLVVNVMQRDSIPSEVDYETRQGVYSICLQLARFLLVGQSMPM
ALDDDVIRDGEALSSRPFRNRPGTGRQLSLCATPEKSSYRQMSLSERSSIRVEEIIPAAR
VAIQTMEVGDYTSTVACFMRLTWAAAAGRLDLVGSPQPIRETHTSFLSQGVRTRVSSTGS
NCSSSSEGETTPTALHAGICVRQQSVSIKDTIIAREALSLLVTCLQLRCQQLSSFYNLPC
VNDFIIDVLLGSPSGEIRRVACDQLYTLSQSDTSGFADVQKPNLFLLSVILTAQLPLWSP
TSVMRGVNQRLLSQCTEYFDLRCQLLDDLTTSEMEASHVNTATMLEDEISWLDNFEPSWS
SEMETSEADNILLAGHLRLIKTLLSLCGKEKEHLGPSLIQQLLDDFLFRASRIIINTSNS
TASLAPSHDFHPKCSTASSRLAAYEVLVMLANSSLSNLRLITRELLSMHHQSDPSLCKEF
DYLPPVESRSVSGFVGLKNGGATCYMNAVFQQLYMQPGLPEAFLSIEDDTEQPDESVFYQ
VQSLFGHLMESKLQYYVPENFWKIFKMWNKELYVREQQDAYEFFTSLVDQLDEHLKKMGR
EQIFKNTFQGIFSDQKICKDCPHRYEREETFMALNLGVTSCQSLEISLDQFVRGEVLEGS
NAYYCEKCKEKRTTVKRTCIKSLPSVLCIHLMRFGFDWESGRSIKYDEQIRFPWVLNMEP
YTVSGMARQDCSGDGGEGRGDGASGGSPRKKVTISENYELVGVVVHSGQAHAGHYYSFIK
DRRGSSRGRWYKFNDNVVEEFDMNDETLEYECFGGEYRPKVYDQSNPYPDVRRRYWNAYM
LFYQKISDQNSPVLPKKSRVSIMRQEAEDLTLSAPSSPDISPQSSPRPPRANNDRLTLLT
RLVRKGEKKGLFVEKMPASIYQMVRDENLKFMRNRDVYNSDYFNFTLSLASVNATKLKHP
DYQAMAKESLQLAVHFLLHTYLHTKKKLRVDTEEWMATVEVLLSKSSAACQWMVQYLVGP
EGREMTRICLLECGMREVRVVVASILEKTLESALNFAEPGLDGLTDALLSLLDKDVPENV
KNCSQYFSLFSNFSQKGCEACQLLLKHSAYRRMLRFLLGPNRQNNQNRRWSPAQAREFLH
LHSTLALITLHSDLDSQQTHAPEGFTLCVGSIPSSTPLLPLHPDILASVFTPEGQPYLLE
VMFAMRELSGPLTPLISMVTYCSYCNEPFSLGVLHLLKTQLETAPPHELKNVFHMLQELL
VVEDPLQSQRLKYAFESEKGLLALMHQSNNVDSRRCYQCVKFLVTLAQKCAPAKDYFKDL
SGHWSWAVQWLQKKMTEHYWTPQSNVSNETSTNKSFQRTISAQDTLAYATALLNEKEQSG
SSNGSDGSPANENAERSLRQGSESPMMLGDSKSDLEDVDP
NT seq
7863 nt
NT seq
+upstream
nt +downstream
nt
atggagaccgaagaggagcagcacatcaccacgctcctctgcatgggcttcccggagccc
gacgtgatacggaaggcgctccgcttggcgaagaacgacatcaacgaggcggtcgcgctc
ctgaccaacgaaagcccggggctcggctacggatatgagcccatggagagcggccctgcc
cccgccttgagtacgagcggcgacggggagtcgagcgggaggaccggcacggggggcttc
gaccctccgcccgcgtaccacgacgtggttgaaggggagagaagcaacgacgagaacggg
aactgctccagcggcagcatggagttccctaccactaacctgtacgagctggagagccga
gtgttcactgaccattggtcaattccgtacaagagggaggaatcactgggtaaatgcctc
atcgcctcgacttgcctcgctcggcacggcctcgccgacgccgacgaaaactgcaagagg
ttcgtggagcgctgtatgccggaggcctttaaaaagttgctgaccagcagcgccgtgcac
aagtgggggactgagatccacgagggaatctacaacatgctcatgttgctggtggagctg
gtggcagagcgggtcaagcaggacccggttcccgtcaacctaatgggtgtcttggcgatg
gccttaaacccagacaacgagtaccacttcaagaaccggatgaaggcctgtcagaggaac
tgggccgaggtgcttggagacgaggccaacatgtttgcggtttctccaagcaacacctat
caaaaagagcctcacggttggctggtggatttagtcaatcaatttggagagttgggagga
ttcactgcgatccagacaaagctcaacacggaggagatcgaaatagcgtatgtgtccgct
ctggtccagcctctgggcgtttgtgcagaatacctcaactcgagtcttgtccagcctatg
cttgatccagtcatccataagatgatcacatatgtacagaacctggaagaaaaggacctc
aaagacaagcggctggtgagcatccctgacctgttgtcggccatcaagctcctgtgtatg
aagttccagagggacatggtcacggtggtggatgacctgcggctcgacacgctgctgcgc
atgctcaaaaccccccatttctccaccaaaatgaactccctcaaagaggtgacaaagtta
atagaggagagcacggtggcaaagactgtgaagaatgcaattgatacagataaactgcta
gactggcttgtggagaactccgtcctgtcaatagcgttggagggaaatattgatcaagca
cagtactgtgagagaataaagggaatcattgaactgctgggaagtaaactctccctggac
gaactctccaagatctggaggatacaggccggccagtcctcaacggtgatcgaaaacatt
cacacaatcatcgccgccgccgcggtcaagttcagcttcgatcagctcacccaccttttt
gtgctcatacagaagagctgggaggtggagagcgatcgcgtcaggcagaagctgctcagt
ctgatcgggaggatcggcagggaggcgcgctccgaaaccaccactggcaaggtgctggag
gtgctgtgggagctggcgcacctccccacgctacctaccagtttggtccagcaggcactg
gaggagcacctggggatcttgagcgacgcctacgccgtcaaggagaccgtcaaacgcaac
tacatcatcaaatgcatcgaggacattaagaagactcaagaggaccaaaaaggcagcgac
agtcaaagttcttttctcactggctcttggggaaagaggaaatctgtgtcagtgaaagct
tcccagccgagcagccctcaggcggtctgggtggtacccgctctgcgtcagttgcacgag
atcacccgctccttcatcaagcagacctaccagaagcaagacaagagcatcatccaggac
ctgaagaagaacttcgagattgtcaagctgatcacaggttccctcgtctgctgccatcga
cttgcggtgaccgcggccggaaacggttgcctgtcgggctccaccatggtggacggaaga
tacacgtaccaggagtatctggatggccacctgcgcttcctggccttctttcttcaggag
gccagcctctacctggtctggaacagggctaaggagatctgggagtgcctggtgtccggc
ccagatgtttgtgaactggaccgtgagatgtgtttcgagtggttcaccaaaggccagcac
gatctcgagagcgacgttcagcagcagctcttcaaggagaagatactgaaactggagcct
tatgagatcaccatgaacggtttcaacctgtttaagaccttctttgagaacgtcaatctg
tgtgatcatcgactaaaacgccaaggaactcagctgtgtgttgaacgcctcgacctgtca
gggatggactttatctggcgtatcgccatggaaacccctgatgaagagatagccaatgaa
gcgatccagcttattatcacgtacagctacaccaatctcaaccccaagatgaagaaagat
tcagtatctttgcacaaaaaattcatcgccgattgttacaagaggctagaggcagccagt
tctgccttgggtgggcctacgttgacgcacgctgttactcgagccacaaagatgttgacg
gccaccgccatgcccacggtggccacatctgtacaatcaccttccagatccactaagctg
gtcataatagaaagactgctgctgttggctgaacgctatgtcatcactatagaggatatg
tattctgttccacgcactattctacctcatggggcttcgttcaacgggcaccctgtcact
cttcacatcacctacgagtcaaccaaagacacgttcaccttagagacccacagcaatgaa
acgataggaagcatccggtggaagatatccgagcacttgagctgcccagtggataacgtc
cagatctttgccaatgatagtgtgttgaccatgaaccgggaccagaaactgctgtcccag
ctcggctttagcgacgagcagagcctgaccgtgaagagctcgggcaccggcacaccttcg
ggcagctccgaatcgtcggcctccgcctccagcagctccagctcggctgtcttcaactcc
gcctatgccctggaacaggagaagtcgctgcccggggttgtcatggcgctggtgtgcaac
gtgtttgagatgctttaccagttggctaacttggatgaaaccagaatcacactgcgtgtg
agaaagctgctcctcctgatcccaacagatcccgaggtgcaggacgctctcgacaacttt
gtcccgaaagaatccagtgtttggagccatcagaaaaccctgttcaccctgggccagggt
acgggctctcgctcaccatccatgggctctaagcagcagcaccagccccagcccagcgcc
gcatccatcctggagtccttatttaggtcttcggcccctggcatgtccacctttcgagtg
ctgtacaacctggaggtgctgagttctaaactcatgcccacttctgatgacgagatggca
aaaaccagcagcaagtccttctgtgacaacttcctcaaagcaggaggccttagtctggtg
gtgaatgttatgcaaagagactccatcccatcagaagtggactatgagacccgacaaggc
gtctactccatctgccttcagttggccaggttccttctggtcggccagagtatgcccatg
gcgctggatgatgacgtgatccgggacggagaggcactgtcgtcccggccgttccgcaac
agacccggtaccggtcgccagctctctctctgtgcgacgccggagaagtcctcctacagg
cagatgtcgctgtctgagcgctcatccatcagagtggaagagatcatacccgccgcccgt
gtggctattcagaccatggaggtgggtgactacacctccaccgtggcctgttttatgcga
ctaacctgggcagcggcggcagggcgactggatcttgtaggcagcccgcagcccatcagg
gagacccacacctcatttctatctcagggagtgcgcaccagagtcagtagcacaggaagt
aactgcagctccagcagcgagggagagaccacgccgaccgcactgcacgccggcatctgc
gtccggcagcaaagcgtctccataaaggacaccatcatcgcccgcgaagctctgtcgctc
ctggtcacctgcttgcagctccgctgtcagcagctgtcctctttttacaacctgccctgt
gtcaacgacttcatcattgatgtgctgctgggatctcccagtggagagatccgtcgcgtg
gcctgcgaccagctgtacactctgagccagtcggacacgtcgggcttcgccgacgtgcag
aaaccgaacttgttcctgctgtcggtcatcctcacggctcagctaccgctgtggagtccc
acgtctgttatgaggggagtcaaccagcgattgctgtcccagtgcacggagtactttgac
ctgcgatgtcagctcctggatgatctgacaacttccgaaatggaggcatcgcatgtcaac
accgccacaatgctggaggatgaaatctcttggctggacaacttcgagcccagctggagc
tcggagatggagaccagtgaggcggacaacatcctcctggcaggacacctgcgactcatc
aagaccttgctgtcgctttgcggcaaggagaaggaacaccttggcccgtcgctgatccag
cagctgttggatgacttcctgttccgagcgtcgcgcatcatcatcaacacctccaactcc
accgcctcgctggcccccagccacgatttccaccccaagtgcagcacggccagcagccgt
ctggcagcgtacgaggttctggtgatgctggctaacagttctctctccaacttgcggctg
atcaccagagagttgctctccatgcaccaccagtccgatccgtcgctctgtaaagagttt
gactatcttccccctgtagagagccgctcagtttcgggttttgtgggcctgaagaacggt
ggagccacgtgttatatgaatgcggttttccagcagctttacatgcaaccagggttacca
gaggcgttcctgtcgattgaggacgacacggagcaacctgatgagagcgtcttctaccag
gttcagtctttgttcggtcacctgatggagagcaaactgcagtactacgtcccagagaac
ttctggaagatcttcaagatgtggaacaaagagttgtacgtacgagagcaacaggacgcg
tacgaattctttaccagcttggtggatcagcttgatgaacacctcaagaaaatggggcga
gagcagatcttcaaaaacacatttcagggcatcttttctgaccagaagatctgcaaagac
tgtccccatcggtacgaacgcgaagagacattcatggcgctgaacctcggcgtgacgtcc
tgtcagagtctggagatctctctggaccagtttgtccgaggggaggtcctggagggcagc
aacgcttactactgcgagaaatgcaaagaaaagaggaccacggtgaagcgaacgtgcatc
aaatccctccccagcgttctctgcatccacctcatgcgctttggctttgactgggaaagc
ggacgctctatcaaatatgatgaacagattcggttcccttgggtcctgaacatggagccg
tacacggtgtccggcatggcgcgtcaagactgcagcggggatggcggggaggggcgaggc
gacggcgcatccggaggctcgcccaggaagaaggtcaccatttcggagaactacgagctg
gtgggcgtcgtggtgcacagcgggcaggcgcacgccggtcactactactcctttattaaa
gatagacgcgggagctcacgcggacgttggtacaagtttaacgacaacgtggtggaggaa
ttcgacatgaatgacgaaacgctggagtacgagtgcttcggaggagagtacaggcccaag
gtttacgatcagtccaacccctatcccgacgtgaggaggaggtactggaacgcctacatg
ttgttttatcagaagatcagcgatcagaactcacccgtcctgcccaagaaaagccgagtc
agcatcatgaggcaggaagcagaggatcttacgctatcagcaccctcctcgcctgacatc
tcgccgcagtcgtcccctcgcccccccagggccaacaacgaccgcctcaccctgctcacc
cgtctggtccggaagggcgagaagaagggcctgtttgtggagaagatgccggcaagcatc
taccagatggtgagggacgagaatctcaagttcatgaggaacagagacgtctacaacagc
gactacttcaacttcaccctctcgttggcctccgtcaatgcaaccaagcttaagcatccg
gactatcaggccatggccaaggagagtctccagcttgccgtccatttcctcctccacaca
tacctgcacaccaaaaagaagctccgcgtggacaccgaggagtggatggccacggtggag
gtgttgctgtcgaaaagcagcgccgcttgccagtggatggttcaatacctggttggaccg
gaaggacgggagatgaccaggatttgtctgttggagtgcggcatgagggaggtgcgggtg
gtggtggcgtccatcttggagaagacactggagagcgccctgaattttgccgagccgggt
ctcgacgggctgaccgacgcgctgctctcgctgctggacaaggacgttcccgagaacgtg
aagaactgctcgcagtacttcagcctcttcagtaacttctcccaaaagggttgtgaagct
tgtcaactgttgttgaaacactcggcctatcggcgaatgctccgtttcctactgggcccc
aatcggcaaaacaaccagaaccggcggtggagtccggcccaggctcgagagtttctccac
ctccacagtacgctcgcgctcatcacgctgcactcggacctggactcccagcagacgcac
gctccggaagggttcaccctgtgtgtcggaagcatcccgtcttcaacgccgcttttgccc
ctgcacccggacatccttgcgtccgtcttcacccctgagggacaaccctaccttctggag
gtgatgttcgccatgcgagagttgtcgggcccgctgacgccgctcatcagcatggtgacc
tactgctcctactgcaacgaacctttctccctgggcgtgctgcatctcctcaagactcag
ctggagacggcgccgccgcacgagctgaagaacgtctttcacatgctgcaggagctactg
gtcgtggaggaccctctgcagtcccagaggctcaagtatgcctttgagtcagagaaaggc
ctgctggctttgatgcaccagagcaacaacgtggacagcagacgttgctaccagtgcgtc
aagttcttggtcacgttggctcagaagtgtgctccagctaaggattatttcaaggacctg
tctggtcactggagctgggcggtgcagtggcttcagaagaagatgacagagcactactgg
acgccgcagagtaacgtatccaacgaaacctccaccaataagagcttccagcgcactatt
tcggcgcaggacactctggcttacgccacggccttgttgaacgagaaggagcagtcgggc
agcagcaacggctccgacggaagccccgccaacgagaacgccgagcgcagcctgagacag
ggatcagagtctcccatgatgctcggcgattccaagagcgacctggaggacgtggaccct
tag
DBGET
integrated database retrieval system
