Syngnathoides biaculeatus (alligator pipefish): 133504087
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Entry
133504087 CDS
T09681
Symbol
si:dkey-110c1.10
Name
(RefSeq) unconventional myosin-Vb
KO
K10357
myosin V
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Pathway
sbia04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
133504087 (si:dkey-110c1.10)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sbia03019
]
133504087 (si:dkey-110c1.10)
04131 Membrane trafficking [BR:
sbia04131
]
133504087 (si:dkey-110c1.10)
03029 Mitochondrial biogenesis [BR:
sbia03029
]
133504087 (si:dkey-110c1.10)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
sbia04812
]
133504087 (si:dkey-110c1.10)
Messenger RNA biogenesis [BR:
sbia03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
133504087 (si:dkey-110c1.10)
mRNA cycle factors
P-body specific factors
133504087 (si:dkey-110c1.10)
Membrane trafficking [BR:
sbia04131
]
Others
Actin-binding proteins
Myosins
133504087 (si:dkey-110c1.10)
Mitochondrial biogenesis [BR:
sbia03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
133504087 (si:dkey-110c1.10)
Cytoskeleton proteins [BR:
sbia04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
133504087 (si:dkey-110c1.10)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
nSTAND3
AAA_22
NPHP3_N
Myosin_N
DUF5945
Motif
Other DBs
NCBI-GeneID:
133504087
NCBI-ProteinID:
XP_061682257
LinkDB
All DBs
Position
7:1895287..1915899
Genome browser
AA seq
1636 aa
AA seq
DB search
MATLRLYTKGASVWIPDPDAVWVSAQLLQDYNPENKNVLLQLPGEKEAQYPVAAASDLPP
LANPDISEGENDLTALSFLHEPAILHNLRVRFLDYNSIYTYCGIVLVAVNPYDELPIYGE
EVIDAYSGQDMAEMEPHIFSVAEDSYRTMIREENNQSIIISGESGSGKTVSAKFTMRYFA
VVGGAAQQTSVEDKVLASNPIMEAIGNAKTTRNDNSSRFGKYIQIGFGRKGDIIGANMST
YLLEKSRVVFQAAAERNYHIFYQLCASRQLPEMRSLKLAGPEHFRYTNQGGDTNIPGTDD
VMEMERTRNAFTILGVFPDQQMELYRILAAILHLGNVKIQGSGRTSDRSYIDSDDSSLAI
FSKLLGVEAAHMAHWLCHRRLVLAGDALVKPMTGQQAVEARDALAKHVYEQMFKWTVHRL
NSALRSQASRARTFIGVLDIYGFETFERNSFEQFCINYANEKLQQQFNRHVFHLEQEEYL
REELTWRRIEFSDNQQCIHLIEGQLGLLDLLDEECRMPKGSDDSWVQKLYDQHLTGRGHP
HFRKPRMSNSAFVILHFADTVQYECGSFLDKNRDTVFEELVNVLKASQSELVAELFQSHG
KGPNVANGSIHSERRAHREHKLTVGFQFRQSLQMLMDTLNSTTPHYVRCIKPNDLKEPFM
FDPKRTVQQLRACGVLETIRISAAGFPSRWTYEEFFFRYRVLLRGSQRWEEARLACVQTL
PQLIPDPDQYAFGKTKVFFRAGQVALLERLRAEKLRGAAVILQSWVRGWLVRIHYTRTLK
ATVIIQRYWRGALARRLAQTLRYTRAALVIQKTYRMLVDRHMFLLVRQAAITIQAFVKGM
LTRRQYRLLLAERAATLLQARVRGWLARRAFTRFRAAVVFAQCCIRRKAARKELLKLKTE
ARSVARYKELNKGMEVKLMQLQIRADQEARERAALKETLRGEREFSAAELASLRAKIEKL
EAGQKKVSPSPACSVVSMEVEQERRRTEEKAAQELQQLTQAVETLQREKVSLTRETEHLT
ACLLQQKQKQEAIVQKAVAEATVALRAEVDEERRKHQGLLREFTRLEQRCDNLSEMSQLS
EGTRGLLRSDSMLSSEPLSPSPQSLTPLSLSPFPSTFPSPEEVRRVSVTSPSVEGRFFEW
NLETPMEHLMDKMGLTKEPAVKLEGEDLAHAYDAVRVANKFLESQLLSLRSQWEEEVERL
RSQLVRVSSGSSFHQQDLLDASEQECARLRKEVKELRNSVTLRRLFTQVFPSAFLPDPQP
KAPALAGLFQCRRRDESKLIRNLISDVRTDVGVSLAPGLAANVVFLCVRQADSRGDQSAA
LSLCRSAVSAMKTALKKHNSDLEMTALWLKNISLLHDLLTRHKSKQTSVPEEFPPLTFDP
SQLIHTLSELRIQAYQQLVSITEKRLQNSIATALLEGEDIATGSRRRATSAAEPDAPTMA
GVLRELGALHAAISHQALHVALMEHAFHQLAYFMSATALNSLLFRKDVCCCSRGIHIRLN
VSQLEEWLRSRGLQTEGAVTSLSPLIQAAQLLQVGKNSKLDAEAIVRTCTALSSQQIVKL
LSNYTPHGDVEERVSVNFIRSVQALLKDRAEAQPRQVLLEVKRVFPVIFPDETPPAVRAD
ELVIPDALKISFLHRV
NT seq
4911 nt
NT seq
+upstream
nt +downstream
nt
atggcaacgttacggctgtacactaagggggccagtgtgtggattcctgacccggatgca
gtatgggtgtcggcacagctcctccaggactacaatcctgaaaacaagaatgtgctgctg
cagcttcctggcgaaaaggaggcacagtacccagtggcggcggcatctgacctcccccca
ctggccaatcctgacatctccgagggcgagaatgacctgacggcgctcagcttcctccac
gaacccgccatcttgcacaacctccgtgttcgtttcctggactacaacagcatttatact
tactgcggcatcgtgctggtggctgttaatccctacgacgagctgcccatctacggcgag
gaggtgattgatgcgtacagcggtcaagacatggccgagatggagcctcacatcttctct
gtggctgaagactcttatcgcaccatgatcagggaagagaacaaccagtccatcatcatc
agcggtgagtcgggctcgggtaagacggtctctgccaaattcaccatgagatactttgcc
gtggtgggcggagccgctcagcagaccagcgttgaggacaaggtgctggcctccaatcct
atcatggaggccatcggaaatgccaaaaccacaaggaacgacaacagcagtcgctttggg
aagtacatccagattggctttggcaggaagggggacatcatcggggccaacatgagcact
tacctgttggagaagtccagggtggtctttcaggcagcagcagaaaggaactatcatatc
ttctaccagctgtgtgcctccagacaattgcctgaaatgagatcactcaaactggctggt
cctgaacatttccgctacacaaaccagggcggggacacaaacattcccgggactgatgat
gtgatggagatggagcgcactcgcaatgctttcaccatcctgggggtgtttcctgaccag
caaatggagctctacagaatcctggcagctattctccacttgggaaatgtgaagattcaa
ggcagcggacgaacttctgaccgtagttatatagattcagatgacagttctttagccatc
ttctccaagctcctgggagtggaggctgcccatatggcccactggctgtgccatcgcagg
ttggtgttagcaggagacgcgctggtcaagcccatgacgggccagcaggctgtcgaggct
cgagacgctctggccaagcatgtctacgagcagatgttcaagtggaccgtgcacagactt
aactctgccctgcgcagccaggcgagccgggccagaacattcatcggggtgcttgacatt
tatggatttgaaacctttgagcggaacagctttgagcagttctgtatcaactacgccaat
gaaaaactgcaacagcagttcaacaggcacgtgttccacctggagcaggaggagtacctc
cgtgaggagctgacgtggaggcggattgagttcagcgacaatcagcagtgtatccatctc
attgagggacagcttggcctcttagacctgctggacgaggagtgccggatgcccaaagga
tcagatgacagttgggtgcagaagttgtatgaccaacacctgactggccgcggtcaccct
cacttccgcaaacctcgcatgtccaacagcgccttcgtcatcctgcactttgccgacacg
gtgcagtacgaatgtggcagcttccttgataagaatcgagacaccgtcttcgaagagctg
gtcaatgttttgaaagcaagtcagtcggagctggtggctgagctattccaaagtcatgga
aagggccctaatgttgccaatggaagcatccactcagaaagaagagcccacagagagcac
aaattgaccgtggggtttcagtttcgtcagtctttgcagatgctgatggacactctgaac
agcaccacacctcactatgtacgctgtatcaaacccaatgacctcaaggagccctttatg
ttcgacccaaagaggacggtgcagcagctgagggcatgtggagtgctggagaccatccga
atcagtgcagctggttttccatccagatggacatacgaggagttcttcttcagatatcgt
gttctgcttcgagggtcccagcgctgggaggaggcacggctcgcatgcgtgcagactttg
cctcagctcatccccgatccagaccagtatgccttcggaaagaccaaagtctttttccgg
gctgggcaggtggctcttctggagaggttgagagctgagaagctgcgaggggcggccgtg
atccttcagagttgggtccgcggttggctggtccggattcactacaccagaacccttaag
gccactgtcatcatacaaagatattggcgaggagctttggcccggcgtttggctcagacc
ctacgctacaccagggctgctttggtcatccagaagacatatcgcatgctggtggacaga
cacatgttcctcctggtcagacaagctgccatcaccatccaggccttcgtcaaagggatg
ttgacccgtcgtcagtaccgactgttgctggccgagcgagccgccacgctgctccaggca
agagtgcgggggtggttggcaaggagggccttcacgaggtttcgagcagccgtggttttc
gcgcagtgttgcattcgtcgtaaggcggccagaaaggagctcctgaagcttaagactgaa
gcccgctcagtggcgaggtacaaagagctcaacaaaggcatggaggtcaaattgatgcag
ctgcagataagagcagaccaggaggccagagagagggcggcccttaaagagaccctgcgc
ggcgagcgagagttctccgctgctgaactggcctccctgagggcaaaaatagagaaacta
gaagcaggtcagaagaaagtcagtccttctcctgcttgttctgtcgtgagcatggaggtg
gagcaagagaggaggcgaacagaggaaaaggctgcccaggagctccaacagctgacacaa
gcagtggagacgctgcagagagaaaaggtgtcacttaccagagaaacggagcatctcact
gcatgcctgctccagcagaaacaaaagcaagaagctatcgtgcaaaaagcagtggctgag
gccacggtggctttgagggcagaggttgacgaggagaggaggaagcatcagggcttgctg
cgggagttcactcggctggagcagcgatgcgacaacctgagtgagatgagccagctgtct
gagggcacgaggggcctcctgagatccgactccatgttaagctcagagcctctgtccccc
tcaccccaatccctcaccccgctctccctctcccccttcccgtctaccttcccgtctcca
gaggaggtgcggcgggtcagcgtgacgtctccctccgtggagggacgattcttcgagtgg
aatttggaaactccaatggagcatctgatggacaagatgggcttgaccaaagagccggcg
gtcaagctggaaggcgaagacctggcccatgcttacgatgcggtacgggtggctaacaag
tttttggagagccagttgcttagtctgcgcagtcagtgggaggaggaagtggaaaggctg
aggtctcagctagttcgagttagctcgggctcctcttttcatcaacaggaccttctggat
gccagtgagcaggagtgtgcaaggctgagaaaggaagtcaaagaacttcggaactctgtc
acattacggcgattattcactcaagtttttccatcagcgtttcttcctgatccccagccg
aaagcacccgcattggccggcctgttccaatgcaggagacgtgatgagagcaaactcatc
aggaatctcatcagtgatgtgcgaacagatgtgggggtgtcgcttgcacctgggctggcg
gccaacgtggtcttcctgtgtgttcggcaggcggacagcagaggggatcaaagcgctgct
ttgtctctttgtcgctccgctgtcagtgccatgaagacagcgctgaagaagcacaacagt
gatttagaaatgactgctttgtggctgaaaaacatcagtctgttgcatgacctgctgact
cggcacaagtccaaacagacttctgtcccagaggaatttccaccacttacttttgaccca
agtcagttgatccatacgctgagcgagctccgcatccaagcctaccagcagctcgtttcc
atcactgagaaacggctccagaactccatcgccaccgccctactggagggcgaagacatt
gccacggggtccaggaggcgagctacctcagcggcggagcccgacgctcccaccatggcc
ggggtgctgagggagctgggggcccttcatgccgccatatcccatcaggctttgcatgtg
gcgctgatggagcacgccttccaccagcttgcctattttatgtccgccactgctctcaat
agcctgctgtttaggaaggacgtgtgctgctgcagccggggaatacacatacgcctcaac
gtgagccagctggaggagtggctgcgtagccgaggtctgcagacagagggcgctgtgacc
tcgctgtcgcctctcatccaagcggctcagcttctgcaggtcgggaagaactcaaagttg
gacgcggaggccattgtgcgcacatgcaccgccctcagcagccagcagattgtgaagctt
ctcagcaactacacgcctcacggcgacgtcgaggaacgagtctcggtcaatttcatccgt
tcggtccaggctctcctgaaagaccgcgcggaagcgcaacctcgccaggtcctcctggag
gtgaagcgcgtgtttcccgtcatctttccggacgagacgccgcccgccgttcgcgcagat
gaattggtcatcccggacgccctcaagatatcttttctacacagggtgtga
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