Syngnathoides biaculeatus (alligator pipefish): 133504106
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Entry
133504106 CDS
T09681
Name
(RefSeq) cyclic nucleotide-gated channel cone photoreceptor subunit alpha-like
KO
K04950
cyclic nucleotide gated channel alpha 3
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sbia04040
]
133504106
Ion channels [BR:
sbia04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
133504106
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
CLZ
cNMP_binding
POP1_C
CDC45
RR_TM4-6
NPR3
DUF8060
YjcZ
HSBP1
Zip
Ion_trans_2
Motif
Other DBs
NCBI-GeneID:
133504106
NCBI-ProteinID:
XP_061682288
LinkDB
All DBs
Position
7:7862333..7872984
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AA seq
700 aa
AA seq
DB search
MAKVNSEISYLTRCRLSSRPSDEELAVIENADSSHDSERALSSKSSRTLFTGPGIMARLS
YFFYMLRNWAFNRMNPEVAVRHDSFLERFRGPELKEVCRRESDGQSTGRNSGLRRKNKKE
DEIKKTKDEKDEKKDEKKDVKDEKKDEKKDDKKDEKKDEKKKEEPPKEVWIMDPAVDMYY
RWLTVIAGPVFYNLIMIVTRACFNELQDRFTKLWIFLDYTSDLIYYTDTFVRSRTGYLEQ
GLLVKDAKKLRAKYRTTSQFKYDIISMIPTDLLFLKYGFNNPEFRFNRLCKISRLFEFFE
RTETRTSFPNMFRISNLVLYILVIIHWNACMFFAISKTIGFGSDTWVYPNISHPEHGRLA
RKYIYSLYWSTLTLTTIGETPPPVKDVEYLFVIADFLTGVLIFASIVGNVGAMISNMNAS
RAEFQAKIDSIKQYMQFRKVTKDLEARVIKWFDYLWTEKKTCDEKEVLKNLPDKLKAEIA
INVHLDTLKKVRIFQDCEAGLLIELVLKLEPQVFSPGDYICKKGDIGREMYIIKEGKLAV
VADDGVTQFVVLSDGAYFGEISILGIKGSKAGNRRTANIRSVGYSDLFALSKDDLMEALT
EYPEAKKALEEKGKAILMKDNLIDEAVANAGADPKDLEEKLTRLQDNLDAMQTKFAKLLA
EFTSSQTRMKQRVSQMEAQVKAVKPEDLSEVVADKDKKVQ
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaggtcaacagcgaaatctcctacttgaccagatgccgcctgtccagtcgcccg
tccgacgaggagctggctgtcatcgaaaatgcagacagcagtcacgattccgagagggcg
ctgtcttccaagtccagcagaactcttttcacgggtccaggaataatggccaggctctct
tacttcttctacatgctgcgcaactgggccttcaacaggatgaaccccgaggtagcggtg
aggcacgactccttcctggagcgcttccggggcccagagctcaaggaggtctgcagacgt
gagagcgacggccagtccacgggccgcaacagcggactccgtagaaaaaacaaaaaggaa
gatgagattaaaaagacaaaggatgagaaggacgaaaaaaaggatgagaagaaagacgtg
aaggatgagaaaaaggatgagaagaaggatgacaaaaaggatgaaaagaaagatgagaaa
aagaaagaggagcccccaaaggaggtttggatcatggacccggctgtagacatgtactac
aggtggctcacggtcatcgctggtccggtgttttacaatctgatcatgattgtcaccagg
gcctgcttcaatgaacttcaggaccgcttcactaaactttggatcttcttggactacacc
tcggacctcatctactacacagacacgtttgtcaggtcgagaacagggtacctggagcaa
ggcctgctggtgaaggacgctaagaagctgagagctaaatacaggaccacgtcgcagttc
aaatatgacataatttccatgatccccactgatctgctcttcctgaaatatggattcaac
aatcccgagttccgcttcaaccgcctctgcaagatctccaggctgttcgagttcttcgag
aggaccgagaccaggaccagcttccccaacatgtttcgcatcagcaatctggttctctac
atcctggtcatcatccactggaacgcctgcatgttcttcgccatttccaagaccatcggt
ttcggctcagacacttgggtatacccaaatatcagccacccggagcatggacgcttggcc
aggaagtacatctactccctctactggtccacgctaaccctcaccaccatcggagagacg
cctccgccggtgaaagatgtggagtacctttttgtcatcgccgatttcctcaccggcgtg
ctcatcttcgctagtatcgtcggtaatgtcggcgccatgatctccaacatgaatgcttcc
cgtgccgaattccaggccaagatcgactccattaagcagtacatgcagttccgtaaagtc
accaaagacctggaggcccgggtgatcaaatggttcgactacctgtggacagagaagaag
acctgcgatgagaaggaggttctgaagaacctgccggacaagctcaaggccgagatcgcc
atcaacgtccatcttgacacgctgaagaaagtccgcatcttccaggattgcgaggcggga
ctgcttatcgagctcgtgctcaagctggagcctcaagtcttcagtcccggggactacatc
tgcaagaaaggcgacatcggccgggagatgtacatcatcaaggaggggaagctggcggtg
gtggccgacgacggcgtcactcagttcgtggtcctcagcgacggtgcatactttggagaa
attagcatcctcggtatcaagggcagcaaggctgggaaccgaagaactgccaacatacga
agcgtgggctactcagacctcttcgccctctccaaggacgacctgatggaggccctcaca
gagtaccccgaagcgaagaaggctctagaggagaagggcaaggccatcctgatgaaggac
aacctaatcgacgaggcggtggctaacgccggagctgaccccaaggacctggaggagaag
ctgaccaggctgcaggacaatttggatgccatgcagaccaagttcgccaagctcctggcc
gagttcacctccagccagacgcgcatgaagcaacgcgtcagccaaatggaggcccaggtg
aaggccgtcaaacccgaggacctttcagaagtggtggccgacaaggacaagaaggttcag
tga
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