Syngnathoides biaculeatus (alligator pipefish): 133504148
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Entry
133504148 CDS
T09681
Symbol
ccdc50a
Name
(RefSeq) coiled-coil domain-containing protein 50 isoform X1
KO
K25949
coiled-coil domain-containing protein 50
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sbia04131
]
133504148 (ccdc50a)
Membrane trafficking [BR:
sbia04131
]
Autophagy
Other autophagy associated proteins
Others
133504148 (ccdc50a)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
CCDC50_N
Nfu_N
Motif
Other DBs
NCBI-GeneID:
133504148
NCBI-ProteinID:
XP_061682358
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Position
7:22346386..22372038
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AA seq
624 aa
AA seq
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MAECNVSIDQEKLPGVKEVCRDFAVLEDHCLAYNLQEQEIESHLASNVHKSRLVQQDLQV
AKKLQEEEDEIAKVVIKKQHVAIERQDNEMAQEIQDQLVRQAEQQRRQQEEKDAAIARKL
YEKEMKEERRRQKHLDEEYYENPEAVRQPLDLDKPTRHTSSSPGPHDLYSPVNSQRDYSP
DSSLVESKRSRNPKQDPTALHSRSRYPEHFVGGEGGRARHADPYPDDLLSPKGRHGDRYP
NYEPAETRRPRDVKAEDTDRAVRRKERPAHSPQSPKERDKGWDRDRDRRPDRESGREVGH
DYHLRKHQRSDREQDRRMARGGKDGEHSRDRGHSEDGYEVIEKHTHRGKDGQQARAKSRE
TVRDNISELRGGRVSREEEEDDTERARMARGRQWVQSGPDEVFEEHRNNEKRGGRRDLWE
SSRSRTPTNNETGQIVHKESGAVVEAEYGLGEATRDLTKMDLRVQELKDLEVAKRMQEEE
VKASKSHVRAAQVAQDEEMARLLMEQEKKEYRKHREREKERERGREEKVREKDRERSTME
KMALEKRRPEGDHRSNSDDVVRPRTREDHDQQRHRNHHKPTKPSHPRPHEYENVNPGYGY
ADHGAPQRVSARPEAAYKGAYYKR
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atggctgagtgtaacgttagcatcgaccaggagaaactacctggagtgaaagaggtgtgc
cgagactttgctgtgctggaagaccactgccttgcctacaacctccaggaacaagagatt
gagagccacttggcatccaacgtccacaagagccgtctggtgcaacaggacctgcaggtg
gccaagaagttgcaggaggaggaggatgagattgccaaggtcgtgatcaagaagcaacat
gttgccatagagcgccaagataacgagatggcccaggagattcaggaccaactggtccga
caggctgagcaacaacgacgacagcaggaggagaaagatgcggctattgctcgtaagctt
tatgaaaaggagatgaaagaggaaagacgacgacagaaacacctggatgaagagtactat
gagaatccagaagctgtgagacaacccctcgaccttgacaagcccacacgtcacacatcg
agctccccaggcccacacgatctgtattctccagtgaattcccaacgtgattactcacca
gattctagtttggtagagtcaaaaaggagcaggaatccgaaacaggatccaacagctctg
cacagccgttccaggtatcccgagcatttcgtgggtggagagggagggcgggccagacat
gccgatccatatccagatgacttgctctcccccaaaggcaggcatggggacaggtatccc
aattatgaacccgcagaaactaggagaccacgtgacgtaaaggcagaggacaccgataga
gcggtgagaagaaaagagaggccggctcattctccacagagtcccaaggaaagagacaag
ggctgggatagagaccgggataggagacctgacagagagagtggcagggaagtaggacat
gactatcatttgaggaaacatcaaaggtcagacagggagcaggacaggaggatggcgaga
ggaggaaaagacggggagcactccagagatagaggacatagcgaggacggctatgaagtg
atagagaagcacacacacagaggcaaggatggacaacaagcaagggcgaagagcagggaa
acggtgcgtgataatatcagcgagctgagggggggcagagtgtcccgtgaggaagaggag
gatgacacggagagggcgaggatggccaggggtcgccagtgggttcaatccggccccgac
gaggtgtttgaagagcacaggaacaacgaaaagagaggtggcaggagagatttgtgggaa
tcttccaggagtcgtacacccaccaacaacgagacaggtcaaattgtgcacaaagagagt
ggagcagttgttgaagcagagtatggactcggcgaggccacaagggacctgaccaagatg
gatttgcgtgtgcaggagctcaaggacttggaggtggccaaaagaatgcaggaggaagaa
gtcaaggcaagcaagagccatgtgcgtgcagcccaagttgcacaagatgaggaaatggcc
cggctgctgatggaacaagagaagaaggagtacagaaaacatcgagaacgtgagaaagag
cgggagaggggacgggaggagaaggtacgggaaaaggacagggagcgctcgaccatggag
aaaatggctttggaaaagaggcgaccggagggagaccatcggtcaaattcggatgacgtt
gttcgacctcgaacccgagaagaccatgaccagcagaggcacaggaaccaccacaagcct
accaagccatctcatcctcgcccccatgagtatgagaatgtgaaccctggttacggctat
gccgaccacggtgctccccagcgggtgtctgccagacctgaggccgcgtacaaaggtgcc
tattacaagcggtga
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