Syngnathoides biaculeatus (alligator pipefish): 133504302
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Entry
133504302 CDS
T09681
Symbol
hif1al
Name
(RefSeq) hypoxia inducible factor 1 subunit alpha, like
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Pathway
sbia04137
Mitophagy - animal
sbia04140
Autophagy - animal
sbia04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
133504302 (hif1al)
04137 Mitophagy - animal
133504302 (hif1al)
04148 Efferocytosis
133504302 (hif1al)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sbia03000
]
133504302 (hif1al)
Transcription factors [BR:
sbia03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
133504302 (hif1al)
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GFIT
Motif
Pfam:
bHLH_HIF1A
PAS_11
PAS_3
HIF-1
PAS
PAS_4
PAS_9
Motif
Other DBs
NCBI-GeneID:
133504302
NCBI-ProteinID:
XP_061682396
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All DBs
Position
8:8567514..8579400
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AA seq
615 aa
AA seq
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MDNGDEAEVTVRRSSSEQRKLRSRDAARCRRGKETELFYDLARTLPLPRRVSTHLDKAAV
VRVALSFLRMRRLLHPGAEIPNAEEDCEDEDPAELLYTQALSGFIVVITAEGDMIYLTEN
VSKHVGIPQLELLGQSVYEFVHPCDQEELRDILLHPVCSKKVSPSQTNFFLRMKCTLTNR
GRTVNIKSASWKVFHCTGHVRAPPLDAAMTLLCQPVPHPSSVDFPLGTRTFLSRHSMDMR
FTRCEGRLPELVGYEAGDLIGRSAFEFHHALDSVHVSKSLHTLLAKGQVSTSPYRFLASG
GGFVWTETQATVLYNDKTSRAEAVVCLNFVLSAVEESDVVFSSEQIWAGRSLESDQFKSE
SLDEDVQMEESPSGGGEPETLLGPADGDGPLGGDLLALSFATPRGPSGVPEDPQDLCTPQ
LRQLLFPIFNSDTPPSSSSSPDPETAPSPNGADAVLDTSEVEKFFAFWPEDGDNTQVMDG
ADLDTLAPYISMDDDFQLSFFDAVSDDDRADELTAVNRKRARDPHDDCATADKRPKRDDC
GPPGPSLEERLPPCRTFPARLEESQSGGAPDTEGRSHLLTDGDPVLGASRGLSDAESLML
DIFKSQPPPDLCPMS
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atggacaacggggacgaagccgaggtgaccgtcagacggagcagctcagaacagagaaag
ttgcgctcccgcgacgcggctcgctgcaggcggggtaaagagacggaactgttctacgac
ctggctcggaccctgcccctgcccagacgcgtttccacgcacttggacaaggccgccgtc
gtcagggtcgccctcagctttctgcgcatgcgccgcctgctgcatcccggagctgagatt
ccaaatgctgaggaggattgtgaggatgaggacccagcggagctcctgtacacgcaggcg
ctttcgggctttatcgtggtgattacggcggagggagacatgatctacttgaccgaaaac
gtcagcaagcacgtcggcatcccgcagttggaacttctgggtcagagtgtgtacgaattt
gttcatccatgcgaccaggaggagcttcgggacattcttctccacccagtgtgcagtaaa
aaagtcagcccgagtcagacgaacttcttcctgcgaatgaaatgcacattaaccaacagg
gggcgcactgttaacatcaagtctgccagctggaaggtgttccactgcacggggcacgtg
cgggcgccccccctggacgcggcgatgacgctgctgtgccagcccgtcccccacccgtcc
agcgtggacttccccctgggcacgcgcaccttcctcagccgccacagcatggacatgcgc
ttcactcgctgcgagggcaggttgcctgagctggtgggatacgaagcgggcgatctgatc
ggccgctcggcgttcgagttccatcacgcgctggactcggttcacgtcagcaagagcctg
cacacgctgttagccaaagggcaggtgagcaccagcccttatcgcttcctagcgagcggc
ggcggcttcgtttggaccgagacgcaagccaccgtcctctacaacgacaagacgtcacgg
gccgaggccgtcgtctgcctcaactttgtgctcagcgccgtggaggagtcggacgtggtt
ttctcctcagagcagatttgggcgggtcgttccctcgaaagtgatcagttcaaatccgag
agcctcgacgaagacgtacagatggaagaaagtcccagcgggggcggcgagccggagacg
cttctcggacccgcggatggcgacggtccgctggggggagacttgttggctttgtccttc
gccacgccgcgcggcccgagcggcgtccccgaggacccgcaggatctttgcaccccgcag
ctgcgccagctccttttccccatctttaactccgacacgccgccgtcctcttcatcctcg
ccggatcccgagacggcgccgagtccgaacggcgccgacgctgtgctggacaccagtgag
gtggagaagttctttgctttttggccagaagatggcgacaacacgcaggtgatggacggc
gccgatctggacacgttggccccgtacatctccatggacgacgacttccagctcagcttc
ttcgacgccgtctcggacgacgatcgcgccgacgagctcactgccgtaaacaggaaacgg
gctcgcgacccgcacgacgactgcgcgacggccgacaagcgtcccaagcgcgacgattgc
ggcccccccggcccctccctggaggagcggctgccgccgtgccgcacgttcccggctcgt
ctggaggagagccaatcgggaggggcgccggacaccgaggggcggagtcatcttctcaca
gacggggatcccgttttgggggcctcgagaggactctctgatgcagaatcactgatgttg
gacatcttcaaatctcagccgcctcccgatttgtgtccgatgtcgtga
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