Syngnathoides biaculeatus (alligator pipefish): 133504390
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Entry
133504390 CDS
T09681
Symbol
rnf115b
Name
(RefSeq) E3 ubiquitin-protein ligase RNF115 isoform X1
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sbia04131
]
133504390 (rnf115b)
04121 Ubiquitin system [BR:
sbia04121
]
133504390 (rnf115b)
Enzymes [BR:
sbia01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
133504390 (rnf115b)
Membrane trafficking [BR:
sbia04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
133504390 (rnf115b)
Ubiquitin system [BR:
sbia04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
133504390 (rnf115b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_2
zf-RING_11
zf-C3HC4
zf-RING_UBOX
Zn_ribbon_19
zf-rbx1
zf-RING_5
zf-ANAPC11
zf-C3HC4_3
HypA
Zn_ribbon_PF0610
Rad50_zn_hook
C1_2
Motif
Other DBs
NCBI-GeneID:
133504390
NCBI-ProteinID:
XP_061682604
LinkDB
All DBs
Position
1:2906366..2918288
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AA seq
297 aa
AA seq
DB search
MAEAAGATVQHRFFCHCCKRETQPLLPDFVCPRCKSDFIEEVDDDSRLLENNTPDSSEDS
NSLFSELWQLLFMERTALLSHPPSSESEQEDSERLLSTQSHLPFVPLGNAEVRAPQVLSL
PGEESSPRPEQRPQLEGIVHHYLTNLFTTNANPGAAPTALTSMLQLYSNPADYAWGQGGL
DTVITELLGQLENTGPPPAEKNMISSLPTVYISQEQTECRLECTICREEYSLRESARKLP
CLHYFHSECIVPWLELHDTCPVCRKSLDGVDNSLLLHASNSPEGHSIRTEQEGRQTI
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggccgccggggctacagttcagcatcggttcttttgccactgctgcaagcgc
gaaacgcaacccctactcccggattttgtctgccccaggtgcaagtctgattttattgag
gaggtggatgatgactccagactattggagaacaacacaccagacagcagtgaagactca
aactcattgttctcagaattatggcagctattgtttatggagcgcactgctctgctgtcg
cacccgccatcgtcagagtcagagcaggaagacagcgagaggttgcttagcactcaaagt
catcttccttttgttccactgggcaatgctgaggtcagagcaccgcaggttctctctctg
cccggagaggagagctcacctcgacctgaacaaagacctcaattggaagggattgtgcac
cactacttgaccaacctgttcactaccaacgcaaaccctggcgctgcacctactgcatta
acaagcatgctacagttgtactcaaaccctgcagattatgcttggggtcagggaggtctg
gatacagtcatcacagagttgttaggacagttggagaacacaggtccaccccccgctgaa
aagaacatgatctcatccttgccgacggtttacatttctcaagagcaaacagagtgcaga
ctggagtgtacaatttgtagggaggagtattcattaagggaatctgcccggaagctaccc
tgcctccattatttccacagtgaatgtatcgtgccatggctggagctgcatgatacctgt
ccagtgtgccgaaaaagcctcgacggcgttgacaacagcctcctcctgcatgcgtcgaac
tctccagagggtcattctatcaggacagagcaggaggggaggcagaccatctga
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integrated database retrieval system
