Syngnathoides biaculeatus (alligator pipefish): 133504391
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Entry
133504391 CDS
T09681
Symbol
brca2
Name
(RefSeq) breast cancer type 2 susceptibility protein
KO
K08775
breast cancer 2 susceptibility protein
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Pathway
sbia03440
Homologous recombination
sbia03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
133504391 (brca2)
03460 Fanconi anemia pathway
133504391 (brca2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sbia04121
]
133504391 (brca2)
03036 Chromosome and associated proteins [BR:
sbia03036
]
133504391 (brca2)
03400 DNA repair and recombination proteins [BR:
sbia03400
]
133504391 (brca2)
Ubiquitin system [BR:
sbia04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
133504391 (brca2)
Chromosome and associated proteins [BR:
sbia03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
133504391 (brca2)
DNA repair and recombination proteins [BR:
sbia03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
133504391 (brca2)
FA (Fanconi anemia) pathway
Downstream FA components
133504391 (brca2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCA-2_helical
BRCA2
BRCA-2_OB3
BRCA-2_OB1
BRCA2DBD_OB2
BRCA2_TR2
Tower
Motif
Other DBs
NCBI-GeneID:
133504391
NCBI-ProteinID:
XP_061682566
LinkDB
All DBs
Position
8:16609189..16627704
Genome browser
AA seq
2786 aa
AA seq
DB search
MFDHLTEEIWKELGPVDPDWFQLLTTRASSREGNVSNQNELCPNQEGKCKTSFGETVATV
AASQQFSTPKVFRRAYAVSPDTKDQQEDSLNLPQQYPVSYAQRISESLGADINPDISWTS
SLNTPPLPSTFIFSKTEESPRSVTFSMDKSVVVVRKLFPSLSNPSRNGATSPQINVPPVF
LHEADIPVAGSHTESQKSPHSSQEHSDGVCKKQVLDTIEDEAIRSPMASILDDAENSPSA
FVTNTNLVLRKVKTERVKSSQEEPHSSSSDVSTESKPVPPPQGESGQDLCRDTNLTQWSP
LSLSDFLATPAAKNDCNSGQPIRPSLNPAGFTRKKTKFIYTIDKEKYSLNNNSIQGHELS
VTLAPKTFDKGGESNISEGKEELHQRELINKEKLPPLLQVNTQDLDMSLLCKAFAQDFSQ
MSHLTAPPKTAAPPLPRPPPPSPPPPPLPIFSPLACLTALKVAREKAKRQVGVHRKAPFD
VSVAEVEVSDSGFLSGTADFSHVTLSCLEKPNPSDRCTLKSTSRKQNKVCLEELSLGTDA
NTKDTSMQQLCNTADLPCPPLLIQSSYCEKSQKIDVSLPSRQLSGFKTASNKSIQISAEN
LQKAEHLFDETIGQQSMKSVCDKEISSVVSRPVKVSTKCLWKDDENRRETEELPRGFPLS
IKDIQNVPQSPEKLNTGTSLIDPNIRCDWYAKEEAPAMPSSAVSSPIGVSKNISLCLKED
HLTFELDDTEEVLQGSGSSVKQIQNAPKSPGNRNAVAFQSDHPIEYNLDAKEENPAMFAL
APLGQKLNQANCKLTASEKADVKELCTLLEESDTQFEFTQFRTVKQLGHEGPTSSPKEGK
DLDPDFLSGIDFDDSFCAEANEKMVFTSNNKTKHEEPNEDRKPPLEPLKKEASIERFQTA
NEGVRVSKKCLKKTKHLLDDLGWSTSAQKSSGYDDRLTLHERTSQEQNNLKGNQGFISLV
KPIQISPKTNVDTVGGMHQGRFQMASGKTILISPRAMQKANAVFKDCIHENEQSLAGSNA
LPNATLSSCAKPNLVSSIDVCSSSSTGFSPAGGKKVASSAEPTAQVKCLLQKEHEDDQVK
YERSSGIKPAARRPSGFQTAGGKQVSVSFTALKKAKSLLDDCDEVEEQPSRYPLGKKREP
LSDREKPASFSDKTLNHNLRSTLESPSVSSVKVFNIKKENATTVDMNGPKCQVKNETLQN
YENFANPSVEVGSSSLSGGGGFSTASGKKVSVSLAAVQKAKHILQDHRNDDLGTKKKHGC
ASGVEGVNHQIGGFQTGGGKQVTISSTALMKLKSLLDDYESVEEHPSHYSLSKKSQFLAR
QTPESFSDKALFDNFCSASESPALKAHDPKQANTASKEKLASSFSIADETNKKTYIPNKA
LRQADDYVKDQMNTNDGISGKDKETSSQVRINTLEVKFENVDTAPCGEKNMGHHTNLENH
ANPSLDVCSSLLSGGGGFCTASRKRVSVSEEALTRAKSLLNDIESNNLKPLRNVSLQNNK
RDHRQNFGFQKASGRRVSWSSAALKKAKSFLGECHGDTADVHYAHVANSAGFNTASGGKV
ITPHEAIARAKSRLDESITDKDVCFQSPAGQKKEKNHLMECEEQDDKTRVKPSKIINCGF
RAASGKAVSFSDEALHKAKALFDNISFNEDVQMDELKMTFSKPSVSGVAQGQSALLRERK
PAAAEPTARERGDLHRQEMAEELDGGVVKAPEDPAVVNFESFDLTDCTETQQLFLAKEAL
DCTKALLVDEGLAMIENMQPQNDSHGPAEVQSFGKRSAEGAELDDQPPLKRRLLDEFHRS
LDSREGSRLCPQTSSLNGLMKDRPAFKYNDLLRPNITKPHRDCMGYVEAAASQRMNQQPL
KAGSTFFPEVFTKSEARSSSGNTKKPPAFVPPFKRQTAVEQRSTKHFNKDTKTTQNSEDP
HSSISVHRITNHVGSESPPADTCWSEGMMLQNVELARDIQDMRIRKKKRQTVRPLPGSLF
VAKTSGATRILLKDVVAGRPPAKYTQKQLYEYGVHRHVCNITSETAEAFRFPLKLFFKME
TFAEEGSIQLADGGWLIPSSDGTAGKEQFLRALCDTPGVDPKLLSDEWVFNHYRWIVWKL
ASMERSFPETMAGLCLTPERVLLQLKYRYDVEVDHSRRPALRKIMEKDDTAAKALVLCVS
GVVSRGQAGNPCAVVWLTDGWYAIKAQLDEPLTILLREGRLAVGGKLIVHSAQLVGSEDP
CIPLEAPESLMLKIFANSSRPARWDAKLGFYKDPRPFLLPLSSLYSNGGPVGCVDIVVLR
SYPLQWMERKNDGGVVFRLARAEEKEEARYNSHREKVMEVLYAKIQAELEKEDKESKRQL
AKRTVSHQDIGGLQDGQELYEAVGDDLVELEAHLSAQQLETLRAYRCSLLEKKQAELEAR
YLRATRENVDEGQASCPQRDVTPVLRLSVADSLNPSGNIYQLNLWRPSSELQALLKEGRR
YKVYNLSTSDRKKRGDVATLQLNATKKTQFQDLQTSPEWLSSCFQPRVSTNFVDLQNLDY
NPVCREVDLTGCVVSVIDGQGASAFYLVDCNVNFVKVCCLSTLLLASLVDVVKAGTLLAL
SNLQLRGQSTRPTPVVYAGDLTVFSANPKEEHLQQALWQLKNLLQAQENFFVHAKDRLSQ
VLKSDVWSSVSSPSPSHKTATTQNTTPQQPIRSLRCFTPISKNLQSPANAASLLEKDPRS
LKRKRAMDYLSRVPSPPPLFRLGPAASPSVKKTFHPPRRNFALGTSKTVHTPTPTALSGG
PPEEDWVNDQELAMIDTQALHVNNTL
NT seq
8361 nt
NT seq
+upstream
nt +downstream
nt
atgttcgaccatttgacagaggaaatctggaaagaattgggaccggtggaccccgactgg
ttccagttgttgacaacgcgggcatcctctcgggaaggaaacgtgtccaatcaaaacgaa
ctctgtcccaaccaggagggaaaatgcaagacgtcttttggggaaactgttgctactgtg
gcagcaagtcaacagttttcaacacccaaagtgttcagacgcgcttatgccgtgtcccct
gacaccaaagaccaacaagaagattcgcttaacttgccacaacagtacccagtcagctac
gcccaacgcatttccgaaagcctgggcgccgacattaaccccgacatatcgtggacgagt
tctctcaatacaccacctttgccttccaccttcattttttctaaaacagaagaaagtccc
cgctctgtgacattttctatggacaagagtgttgtggtggttcggaagctcttcccttct
ctttccaacccgtccaggaatggtgcgacgtcaccacaaatcaatgtcccgcctgtgttt
ctacacgaagctgatattccagtggctggctctcacacagagtctcaaaagtcacctcac
agttctcaggaacacagcgacggggtctgtaaaaagcaggtccttgacaccatcgaggat
gaggcgatccgcagtcctatggccagtattctcgacgatgccgaaaacagtccatctgca
tttgtcaccaatactaatttggtactgaggaaagtgaagaccgagagagtgaaaagtagc
caagaagaacctcacagcagctcttcagatgtttcaactgagtctaagcctgtgccccca
ccacaaggagaatcgggtcaagacctatgcagagacactaacctcacacagtggtcaccg
ttgagtttatcagactttttagccacccctgctgcaaagaatgattgtaattctggccag
ccaattagaccatctttgaaccctgctggatttacaaggaaaaagaccaaattcatttac
accattgacaaggagaagtactctctgaacaacaactccattcaaggtcatgaactgtct
gttacactggcgccaaaaacctttgacaaaggaggggagtccaacatcagcgaaggtaag
gaggagcttcatcaacgagaactcatcaataaagaaaagctgcctcctttgcttcaagtc
aacacccaggatttggacatgtcgctactttgcaaagcatttgcacaagacttcagtcaa
atgtcccacctgactgcaccaccgaaaacagcagcacctcctcttcctcgtcctcctcct
ccttctcctcctcctcctcctcttcctattttctccccgttggcctgtcttacagcgttg
aaagttgctcgagagaaagccaaaaggcaagtcggtgttcatcgtaaagcaccctttgac
gtgtcagttgctgaggtagaggtgagcgacagcggcttcctgtcaggcactgctgacttc
tctcatgtaactttgtcttgtttggagaaacccaatccaagtgaccgttgcactttaaag
tctacaagtagaaaacaaaacaaggtgtgtttggaggagctttcacttggtacagacgcc
aacaccaaggatacatcaatgcagcaactctgcaatactgctgacttgccctgccctcca
cttttaattcaatccagttattgtgaaaagagccaaaagattgacgtttctcttccctca
agacagttgtcaggtttcaaaacagcttccaacaaaagtattcaaatatcagcagaaaac
ctgcagaaagcagaacacctctttgacgagaccataggtcagcaatcaatgaaaagtgtc
tgtgacaaggaaatttcttctgtcgttagccgcccggtaaaagtttcaacaaagtgcctg
tggaaagatgatgaaaatcgtcgtgaaacagaggagttaccacgaggcttccctttatct
atcaaagatattcaaaatgttccacaaagtcctgaaaagttgaacactggcacatctttg
attgatccaaacatcagatgcgactggtatgccaaagaggaagctcctgcaatgccttct
tctgccgtgagtagtccgataggagtttccaaaaatatctctttgtgtctgaaagaggat
catttgacatttgaacttgatgacacagaggaggtacttcaaggctccggttcatcagtc
aaacaaatccaaaatgctcccaaaagtcctggaaataggaacgcagttgcatttcagagc
gatcaccccattgaatacaacctcgacgcaaaagaggaaaatcctgcaatgtttgctctt
gccccattaggccaaaaactcaaccaggccaactgcaagctgactgcctcagagaaggct
gatgtgaaggagctgtgcaccctcctggaagagtcggacacccagtttgaattcacgcag
ttcagaaccgtaaaacaactgggtcacgagggtccgacctcatctcctaaagagggcaaa
gacctagaccctgacttcctgtctggtattgatttcgatgacagcttttgtgcggaggca
aatgagaaaatggtattcacgtcaaacaataaaacaaaacatgaagaacccaatgaggat
aggaaacctccactagaacctttgaaaaaagaagcatccattgaaagatttcaaacagcc
aatgaaggtgtcagagtttccaaaaagtgtctgaagaaaaccaaacatttattggatgac
ttgggctggagtacttccgcacaaaagtcaagcggttacgatgatagactcacgctgcat
gagagaacttctcaggaacagaataatttgaaaggcaatcaaggcttcatttcattggtc
aaacccattcaaatatctccaaaaacgaatgttgacacggttggaggaatgcatcaaggt
aggttccaaatggccagtgggaaaacgattctgatatcgcccagagcgatgcaaaaggca
aatgctgtcttcaaggactgcattcatgaaaatgaacaatcccttgcgggaagtaacgct
ttaccaaatgcaacattgtcatcctgtgccaaaccgaacctcgtttcctctatcgacgtt
tgctcgagcagtagtactggattctccccagcaggtgggaagaaagtggcttcatctgct
gagcccacggctcaggtcaaatgtcttttgcaaaaagagcatgaggatgatcaagtgaaa
tatgaaaggtcctcgggaatcaaacctgctgcccgtcggccgagtgggttccagacagca
ggtggtaaacaggtttctgtttccttcactgctctgaagaaagcaaaatcattgcttgat
gattgtgatgaagtcgaggaacagccatcccgttatccactgggaaaaaaacgtgagccc
ctgtcagatcgtgagaagcctgcgtcattttcagacaagactctcaatcacaatctccgc
tccactttagagagtccgtctgtttctagtgtaaaagtgtttaacataaaaaaagaaaat
gctacaactgtggacatgaatggcccaaaatgtcaagtgaaaaatgaaacactacagaat
tatgaaaactttgcaaatccatctgtagaggttggttcttcttccctgagtggtggtggt
ggattctctactgccagtgggaagaaggtatctgtgtctttagcagccgttcaaaaagcc
aaacacattttgcaagatcaccgcaatgatgacctcggcacaaaaaagaaacatggatgc
gcctcaggagtcgaaggagtcaaccatcagattggtggatttcagaccggaggaggcaag
caagtcactatttcttccacagcccttatgaaattaaaatccttacttgatgattatgaa
tctgtcgaggaacatccatcccattattcactgtcaaaaaaaagtcagttcctcgctaga
cagacgccagagtcattctcggacaaggctctctttgacaacttctgttccgcttcagag
agtccagctttgaaagcgcatgacccaaaacaagcaaatactgcaagcaaagagaagtta
gctagttctttttcaattgcagatgagacaaacaaaaagacctatatacctaacaaagct
ttgcggcaagcagatgattacgtcaaagaccagatgaacactaatgacggaatctcggga
aaagacaaggaaacaagtagtcaagtgagaataaatacgctcgaagtcaagtttgaaaat
gtggacactgcaccatgtggggaaaaaaacatggggcatcataccaacttggaaaaccat
gcaaatccgtcattagatgtctgttcttctcttctgagcggtggcggcggattctgtact
gctagcaggaagcgcgtgtctgtctctgaagaagcactgaccagggccaaatctctctta
aatgacattgagagcaacaacctgaagcccctccgcaatgttagtttacaaaacaacaaa
cgagaccatcgccaaaattttgggttccagaaggccagcggcagaagagtttcttggtct
tccgcagctctcaagaaggcaaaatcgtttctcggtgaatgtcacggagacacagcagat
gtacattatgcacatgtagccaatagtgctggatttaacacagcaagtgggggaaaagta
atcacgccccacgaagcgatagcaagagcaaagtcccggctggatgaaagcatcacagac
aaagacgtatgcttccagtcacctgcgggtcagaagaaagaaaaaaatcacctgatggaa
tgtgaggagcaggatgataaaacaagagtgaaaccgagcaagataataaattgtggattc
cgtgcagccagtgggaaagctgtgtccttttctgacgaggccctccacaaagcaaaagct
ctttttgataacatcagcttcaatgaagatgtccaaatggatgaactgaaaatgaccttt
agcaagccttcagtgtctggggttgctcaaggtcaaagtgcattgttaagagaaagaaag
ccagcagctgcagaaccaacggcgcgtgaacggggcgaccttcatagacaggaaatggca
gaggagttagatggtggagttgttaaggcacctgaggatcccgcagtagtaaattttgag
tcgttcgacctgactgactgcactgaaacgcagcagttgtttctcgccaaggaagcattg
gactgtaccaaagctttactggtggatgagggtcttgcgatgatagaaaacatgcagcca
cagaacgactcccatgggcctgcagaggtgcaatcatttggaaaaagatcagcagaaggc
gctgaattggatgaccaacctcctctaaagagaagattgctggatgagttccacagatct
cttgacagtcgagaaggatcaaggctttgcccgcaaacaagttctctgaatggtctaatg
aaggacaggccagcgttcaagtacaacgacttgcttcgtccaaacatcaccaagccccac
agggactgcatgggttacgtggaggccgccgcgtctcagaggatgaatcagcagcccttg
aaagctgggtcgacattttttcctgaggttttcacgaagtctgaggcacgatcgagcagc
ggcaatacaaaaaaacctcccgcctttgttcctccgttcaaaagacaaacggcggtcgaa
cagcgctccacaaaacacttcaataaagacacgaaaaccacacaaaacagtgaggaccct
cactcgagcatctcagtccatcgtatcaccaatcacgtcggcagtgaaagcccacctgct
gacacgtgttggagtgaagggatgatgctccaaaatgtggagctggcacgagacatccaa
gacatgaggatcaggaagaagaagcgccagactgtaagacctttgccaggaagcttgttt
gttgctaaaacctcaggagcaacgaggattcttttgaaagatgttgtggctgggaggcca
cctgccaagtacacccagaaacagctgtacgaatatggcgtgcatcgtcacgtgtgcaat
attaccagcgaaacagcagaggctttccgcttccctctcaagctgttcttcaaaatggaa
acctttgctgaggaaggcagcattcaacttgcagatggcggatggctgattcccagcagt
gacgggacggctggcaaagaacagttccttagagccttgtgcgacacacctggcgtggat
cccaaactgctgagcgacgagtgggtcttcaatcactacaggtggattgtgtggaagctg
gcctccatggagagatccttcccggaaacaatggcaggcctctgcctcacacctgagagg
gttctactgcagctcaagtacagatacgacgtggaggttgaccacagccgccggccggct
ctgaggaagatcatggaaaaggacgacacagcggcgaaagctctggttctgtgcgtcagc
ggggtggtctcacgaggccaagcgggaaacccgtgcgcggtggtgtggttgacggatggc
tggtacgccattaaagcccagctggatgagccgttaacaatcctgctgcgtgagggtcga
ctggccgtgggtgggaagctcatcgtccacagcgcccagctggtggggtcagaggacccc
tgcatacccctggaagcacctgaatcccttatgcttaagattttcgccaacagcagcaga
cctgcccggtgggacgctaaacttggattttacaaggatcctcggccgttcctgcttcct
ctatcctcgttgtacagcaacggaggccctgtcggatgcgtggacattgtggtgttgaga
agctaccccttgcagtggatggagaggaagaacgacggcggcgttgtgtttcgcttggcc
cgcgccgaagagaaggaggaggctcgatacaacagccacagggagaaggtcatggaggtc
ctctatgccaagatacaagcagagttggaaaaggaggacaaggagagcaaacgtcaactc
gcaaaacggactgtgagtcatcaggatattggaggtctgcaggacgggcaggagctgtac
gaagcggtgggagatgacctagttgaactggaggcccacctgagcgcgcagcagctggag
actctgcgggcttaccggtgctcgctgctggaaaaaaaacaggcggaattagaagctcgc
tacctacgtgctacacgggaaaatgtggacgagggccaggcgagctgccctcagagagac
gtcacacctgtcttgagactcagcgtcgcagactctttgaatcccagtggcaacatttat
cagttgaatctttggcggccgtcctcggagctgcaggccctattaaaggaaggtcgtcga
tacaaagtctacaacttgtccacgtcggacaggaagaagcgtggagatgttgccacgctt
cagctcaacgccaccaagaaaacacaatttcaggaccttcagacctctcccgaatggcta
tcctcttgctttcaacctcgagtgtctaccaactttgtggatcttcaaaacctagactat
aatcctgtgtgcagggaggttgatctgactggctgtgttgtcagtgtcattgacggacaa
ggtgcttctgccttctacctggtggactgcaatgtcaactttgtgaaggtgtgctgtttg
agcaccctgcttttggccagtctggtcgatgtggtgaaagccggcacgctgctggctctg
agcaacttgcagctgaggggccagtccactcggcctacccctgtcgtgtacgcgggagac
ctcacggtcttctctgccaaccccaaagaagagcatctccaacaggccctctggcagcta
aagaaccttctacaggcacaagagaacttctttgtgcatgcaaaggacagactttcccag
gtgctgaagtctgacgtgtggagctcagtcagctctcccagtccgtctcataaaacagcc
acaactcaaaacaccacacctcagcagccaatcagaagcctgagatgcttcactccaata
agcaagaaccttcagtctccagccaacgctgcttctttattggagaaagacccgagaagc
ttgaagaggaagcgagctatggactacctgtctcgtgtgccgtctcctccgccgttgttc
cgcctgggcccggccgcttcgccctctgtcaagaagaccttccaccctcctcggagaaac
ttcgcacttggcacttcaaaaactgtacacaccccaacccctacagcgctatctggcggt
ccacccgaggaggactgggtgaatgaccaagagctcgctatgattgatacgcaggcctta
catgtcaataacacactgtaa
DBGET
integrated database retrieval system
