Syngnathoides biaculeatus (alligator pipefish): 133504570
Help
Entry
133504570 CDS
T09681
Symbol
atg16l1
Name
(RefSeq) autophagy-related protein 16-1 isoform X1
KO
K17890
autophagy-related protein 16-1
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Pathway
sbia04136
Autophagy - other
sbia04140
Autophagy - animal
sbia04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
133504570 (atg16l1)
04136 Autophagy - other
133504570 (atg16l1)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
133504570 (atg16l1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sbia04131
]
133504570 (atg16l1)
03029 Mitochondrial biogenesis [BR:
sbia03029
]
133504570 (atg16l1)
Membrane trafficking [BR:
sbia04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
133504570 (atg16l1)
Others
Specific organelles associated proteins
Auto phagosome
133504570 (atg16l1)
Mitochondrial biogenesis [BR:
sbia03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
133504570 (atg16l1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40
ATG16
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_WDR36-Utp21_2nd
WD40_Gbeta
WDR55
Beta-prop_WDR3_2nd
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_CAF1B_HIR1
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
Beta-prop_Aladin
Beta-prop_TEP1_C
WD40_MABP1-WDR62_1st
Beta-prop_SCAP
Beta-prop_DCAF4
ANAPC4_WD40
WDR90_beta-prop_4th
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT122_1st
NBCH_WD40
Beta-prop_EIPR1
Beta-prop_IFT140_1st
eIF2A
Tricorn_2nd
Beta-prop_ACSF4
Beta-prop_VPS8
Beta-prop_WDR41
Beta-prop_DCAF12
ADIP
KASH_CCD
DUF4200
STX6_10_61_N
EXOC6_Sec15_N
Motif
Other DBs
NCBI-GeneID:
133504570
NCBI-ProteinID:
XP_061682931
LinkDB
All DBs
Position
8:9293412..9303297
Genome browser
AA seq
614 aa
AA seq
DB search
MAQRRGGACTWKRHICEQLRLRDRLQRHAFDEIVQRYNRLLEKSDLRAVLSERYQADKYE
VARGHEAAATDAGRGDGLALQQEMADMRIRHQEELTELHKKRGELAQTVIELNNLIQQKD
KEIQSNEAKLQEYQRQTADLEGDCRELNNCLQDLERANQTLKDEYDALQITFSALEEKLR
KTTEDNQELVSRWMAEKAQEANRLNAENEKDSRRRQAKLQKDLADAAKEPLPVDPDDNIE
VLAEDCGKGGGETARERALGRTASHLCSSKKIPPSQPPPGGLLDSISNIFGRRGANSFGT
SPENCQTPSGACVEVRVPSTALHVFEAHDGEVNAVRFSPGSRLLATGGMDRRVKLWEVVS
GRCEPKGALTGSNAGITSIEFDSAGSYLLAASNDFASRIWTLEDYRLRHTLTGHSGKVLS
ARFLLDNARIVSGSYDRTLKLWDLRSKVCMKTVFTGSSCNDIVCTEQCVMSGHFDKKVRF
WDIRAESNVRELELLGRVTSLDLNHDRTQLLACSRDDLLKIVDLRTNAVRQTLGAQGFKC
GADWTRVTFSPDGNFVAGGSADGALYIWNVLTGEVDRTLDRNHNSAINAVSWSPSGTYVS
SVEKGSKAILWSDM
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagcggcgggggggcgcctgcacttggaagagacacatctgcgagcagctcagg
ctccgagaccgcctgcaacgccacgccttcgacgagatcgtccagcggtacaatcgactc
ctggagaagtcggaccttcgggccgttctgtcggagcgctaccaggcggacaagtatgaa
gtcgcgcgaggacacgaagccgcggcgacggacgccggtcgcggcgacgggctggcgctg
cagcaggagatggccgacatgaggatccgccaccaggaggagctgacggagctgcacaag
aaacgaggggagctggcccagactgtgatcgagctgaacaacctgatccagcagaaggac
aaagagattcagagcaacgaggccaagctgcaggagtaccagcggcagacggccgacctg
gagggagactgccgagaactcaacaactgcctgcaggacttggagcgagccaaccagacg
ctgaaagacgagtacgacgcccttcagattaccttcagcgccctggaggaaaaactgagg
aagaccacggaggacaaccaggaactggtctcccgttggatggccgagaaggctcaagaa
gccaaccggctcaatgccgagaacgagaaggacagcagacgcagacaggctaaactgcag
aaggacctggcggacgccgccaaagagccgcttcccgtcgacccggacgacaacatcgag
gttttggccgaggattgcgggaagggaggcggcgagacggcgcgcgagcgagcgctcggc
agaacggcgagtcatttgtgttccagtaagaaaatcccgccttcccagccgccacccggc
ggtctgctggactccatctccaacatcttcggacggcgaggcgccaactctttcgggact
tccccggaaaactgccagactccgtcgggggcctgcgtcgaggttcgagtcccgtccacg
gcgctgcacgtatttgaagcgcacgacggcgaggtgaacgcggtgcggttcagccccggc
tcgcgtctcctggccacgggagggatggaccgcagggtgaagctctgggaggtggtctca
ggacgctgcgagcccaaaggagctttgaccgggagcaacgccggcatcaccagcatcgag
ttcgacagcgccggttcgtacctgttggctgcctccaacgactttgcgagccgcatctgg
actctggaggactacagactgaggcacacgctgaccggacacagcggcaaggtcctgtcg
gcccgcttcctgctggacaacgcccgcatcgtctcgggaagctacgaccggaccctcaag
ctgtgggacctccgcagcaaagtctgtatgaagaccgtcttcacgggctccagctgcaac
gacatcgtgtgcaccgagcagtgcgtgatgagcggacactttgacaagaaagtccgcttc
tgggacatcagggccgagagcaacgtgcgggagctggagcttttgggccgggtgacgtct
ttggacctgaaccacgaccgcacccagctgctcgcctgctccagagacgacctgctcaag
atcgtggacctgcgcacgaacgccgtcaggcagaccctcggcgctcaaggcttcaagtgt
ggcgccgattggacccgggtgaccttcagtcccgacggaaactttgtggccggcggctcg
gcggacggggcgctctacatctggaacgttttgacgggcgaggtggaccgaacgctggac
cgcaatcacaactcggccatcaacgcggtgtcgtggtctccgtcgggcacgtacgtgagc
agcgtggagaagggcagcaaggccatcctgtggtccgacatgtga
DBGET
integrated database retrieval system
