Syngnathoides biaculeatus (alligator pipefish): 133504594
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Entry
133504594 CDS
T09681
Symbol
trpc4b
Name
(RefSeq) LOW QUALITY PROTEIN: short transient receptor potential channel 4b
KO
K04967
transient receptor potential cation channel subfamily C member 4
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sbia04040
]
133504594 (trpc4b)
Ion channels [BR:
sbia04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
133504594 (trpc4b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
TRP_2
Ank_2
Ank_4
Ank
Ank_3
Ank_5
PKD_channel
YVC1_C
BAR_4
Motif
Other DBs
NCBI-GeneID:
133504594
NCBI-ProteinID:
XP_061682988
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Position
8:complement(17012824..17020698)
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AA seq
758 aa
AA seq
DB search
MXTMSQLYYKKTDSSSYSDRIPLRIVRAESELSALERAYLGAVGKGDYATVKEALEEAEI
YFRINIDCVDSLGRNALLIAIENENLEIVELLLSYNVHVGDALLHAIRKEVVGAVELLLN
HKKPSGEKQLPPILLDKQFSDFTPDITPIILAAHTNNYEIIKLLVQRGVSIPQPHAVLCD
CLECVSSLDVDGLRHSHSRLNIYKALASPSLIALSSEDPFLTAFQLSWELKELSRVENEF
KSEYEELSHTCKQFAKDLLDQTRSSKELEIILNYRDDINPLLDENTNDLARVKLAIKYCQ
KEFVAQPNCQQLLASRWYDEIPGWRRRHWAVKFITCILIGLLFPVLSILYLVSPKSRYGL
FIRKPFIKFICHAASYLTFLFLLLLASQHIEAPQRDFQGPAPTVVEWMILPWVVGFIWTE
IKQMWDSGFQDYMDDWWNIMDFIMNALYLATISLKIVAYIKYSGYKPRCSWEMWHPTLIA
EALFAIANIFSSLRLICLFTANSHLGPLQISLGRMLLDILKFLFIYCLVLLAFANGLNQL
YFYYETDEGSNCKGIRCMQQNNAFSTLFETLQSLFWSVFGLISLYVTRVKPDHEFTEFVG
TTMFGTYNIISLVVLLNMLIAMMNNSYQHIADHADIEWKFARTKLWMSYFEEGGTLPSPF
NIIPSPKSFYFLTGWIRARVLRRPSLKRLATFESLGRRAADNVRLNHEYQEVLRNLVKRY
VAAMIRDAKTEEGLTEENFKVSGTSYTEELSNVFIWRC
NT seq
2277 nt
NT seq
+upstream
nt +downstream
nt
atgtgaacaatgtcccagctgtactacaagaagaccgacagctcctcatacagtgaccgc
atccctctgcgcatcgtccgggctgagtcggagctctcggccctagagagggcctacctc
ggggccgtgggcaaaggggattacgctacggtgaaggaggcgctggaggaagccgagatc
tatttccgcatcaacatcgactgtgtggactcgctggggcgcaatgccctgctcatcgcc
atcgagaacgagaacttggagatcgtggagctgctgctcagttacaacgtgcacgtgggc
gacgccctgctgcatgccatccgcaaggaggtagtgggcgccgtcgagctgttgctcaac
cacaagaagcccagtggtgaaaaacagctcccaccgattctgctggacaaacagttctcg
gacttcacccctgacatcactccgatcatcctggcggcccacaccaacaactacgagatc
atcaaacttcttgtgcagcgaggagtctccatccctcagccgcacgccgtgctgtgcgac
tgcctggagtgcgtgtccagtctggacgtggacggcctgcgccactcgcactcccgcctc
aacatctacaaggcgctggccagcccgtcgctaatcgccctatccagcgaggaccctttc
ctcacggcctttcagctcagctgggagctgaaggagctcagcagggtggagaacgagttc
aagtcggagtacgaggagctgtcgcacacgtgtaaacaatttgcaaaggacctcttggac
cagaccaggagctccaaggagctggaaattatcctcaactaccgtgatgacatcaaccca
ctgctggacgagaacacgaatgatctggcacgggtcaaattggctatcaaatactgccag
aaagagtttgtcgcccagcccaactgtcagcagctgctggcctcccgatggtacgacgag
atccccggctggaggaggcgtcactgggcagtcaaattcatcacgtgcatactcatcggg
ctcctcttccccgtattatccatcttgtacttggtctctccgaaaagccgttacggctta
ttcatccgcaagccctttatcaagttcatctgtcacgccgcttcctacttgacgttcctg
ttcctgctcctcttggcatcgcagcacatcgaagcgccacagcgtgactttcagggcccg
gcaccaaccgtggtggaatggatgatcctaccctgggtcgtcgggttcatctggacagag
atcaaacagatgtgggatagcggtttccaagactacatggacgactggtggaacataatg
gacttcattatgaacgcactgtatctcgcaaccatttccctgaagattgttgcctatata
aagtatagtgggtacaaaccccgatgcagctgggaaatgtggcacccgaccctaatagcc
gaggctttgttcgccatcgctaatatcttcagctccctgcgcctcatctgccttttcact
gccaattcccatctgggcccgctgcaaatctcgctgggccgcatgctcctcgacatcctg
aagttcctcttcatttactgtctggtgctgctggccttcgccaacggcctcaaccagctc
tatttttactacgaaaccgatgagggcagcaactgcaagggtattcgttgcatgcagcag
aacaacgcgttctcgacgttattcgagacgctgcagtcattattctggtccgtgtttggc
cttatttccctgtatgtgacgcgagtaaagccggaccacgaatttacggagtttgttgga
accaccatgttcggcacgtacaacatcatctccctggttgtgctgctgaacatgctaatt
gccatgatgaacaactcgtaccagcacattgctgatcacgccgatattgagtggaaattt
gccagaactaaattatggatgagctactttgaagagggaggaactttgccatctccgttc
aacataatacccagtccaaagtctttttattttctgacaggatggatacgagcacgtgta
cttcggaggccgagcttaaaaagacttgcaacctttgaaagtttggggaggcgtgcagca
gacaatgtcagactaaaccacgagtaccaggaggtcttgagaaacctggtaaagaggtat
gtagctgcgatgatcagagacgccaagacagaagaagggttgactgaggaaaacttcaag
gttagcggtacctcctatacggaagaattgtcaaacgtcttcatttggcgttgttaa
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