Syngnathoides biaculeatus (alligator pipefish): 133504627
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Entry
133504627 CDS
T09681
Name
(RefSeq) neural cell adhesion molecule L1.1-like isoform X1
KO
K06550
L1 cell adhesion molecule
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Pathway
sbia04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
133504627
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
sbia04515
]
133504627
04090 CD molecules [BR:
sbia04090
]
133504627
04091 Lectins [BR:
sbia04091
]
133504627
Cell adhesion molecules [BR:
sbia04515
]
Immunoglobulin superfamily
L1 family
133504627
CD molecules [BR:
sbia04090
]
Proteins
133504627
Lectins [BR:
sbia04091
]
I-type lectins (Siglecs)
133504627
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
fn3
ig
Ig_2
Bravo_FIGEY
V-set
Pur_ac_phosph_N
Ig_DSCAM-DSCAML_C
C2-set_2
Ig_VEGFR-1-like_5th
CarboxypepD_reg
Syndecan
Motif
Other DBs
NCBI-GeneID:
133504627
NCBI-ProteinID:
XP_061683068
LinkDB
All DBs
Position
2:complement(3643740..3696961)
Genome browser
AA seq
1283 aa
AA seq
DB search
MCVSMALPFLVLLPLTFLSPSAPRLAQGALVIPQGYKANNISQPPVLTMPSEVKTSYTAF
SRDDIDLPCEASGNPPPTFRWVKDGRTFESERTESGTLEVNEDEELEFYQGTFRCYASNM
LGTAMTQTVHINVEAQPVVQKQKKFRRQAYVGESMVLSCTPPSSSSPPVIHWMDKKMVHI
RQSDRVTVGLNGNLYFANLLKSDSRLDYICNAQYTAARTILPDTAIALIVLPSNDVVHGK
PPHIFHPSGSHSSVLALRGQTLTLECIPKGLPTPKVEWKKKDGNLDETSAHPENYNRWLY
FDSISQSDDGEYECRAFNTHGSSVHSYTVTVEAAPYWVKEPQNLRYAPGETVRLDCLAEG
IPTPNVTWSINGQPLSTVDKDTRRSVSGGVLKLKDVLLSDTAVYQCEAANKHGSILINAY
LHVVELPPQILSADGVVYRVTEGGTVKMSCETFGSPLPHVKWDWEDWTPLLSDPRVFLLT
NGTLELSDVGHSDSGTYTCVIKNTNISINAHLEVFNKTTIETAPQNVRALRGGSAVLDCH
VRKDPRLLRHQIIWRKDGQKLDESSPDDKYTVFENGTLKVTDIQSQDNAAYSCEVITELD
QVTAGGSVTVVARPDPPQDVSLTDVKDDTLTLSWIPGRSHNSPITEFIVEAKEEQHSRRH
DGDTWRWQVLKRVSADFNHLQLSLRPFCTYAFRVVAVNQLGLSDPSRSTALHSTPPAVPH
SNPTGVRSESSDAGTLAITWDEMPRRLHNGQDFQYKVLWRKAGDKSDRWNHDYTKSPPFL
VNNTGTYEPFEIKVQAVNTLGEGPAPEAQIGHSGEDVPEESPSGVEVHVMNSTIAVSWNE
AQKVRGRLLGYKIYIRRLGPENGRVRRSPGELRHLQEGKEREGRSERGKGDDKVVVVQGM
KTATEVTGLQLFSRYTVCVTAFNSKGESPASLPVNFSTPEGVPGPPSSLVFESPSENSML
LYWSPPLQTNGILLGYMVQYQREVKSRDSPVQIELIPDPSVTHLMLDSLDPHSYYTFQVI
ARTAAGDGQPITRRNATLFDGVPPRNITVMPDKTSLNLSWVPGERERNHGFHIDFLKKSA
GGQWKVSEMLNSSQGFYSLTGLQPGTEYHLVVMHGNYTQWEAAKWTLGPGPSEVSGGFAN
QGWLIGLISAIVLLILILLILCLVKRRKGGKYAVKDKEEKEVDSEAKPMKDETFGEYSDT
DEKRTESQPSLCGDSKLGSDDSLAEYGDSVDIQFNEDGSFIGQYSGRATAPAGNESSGPT
SPDNTAPPPPIAPSMSSILNRPN
NT seq
3852 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgtgtcgatggccctccccttcctcgtcctcctccctttgaccttcctctcgccg
tccgcgcctcgattggctcagggagcgctcgtcatcccgcaaggctacaaagccaacaac
atttcacagccccctgtgctcacgatgccctcagaggtgaagacgtcatacacggctttt
tctcgcgatgacatcgatctgccgtgcgaggcctcgggcaacccgccgcccacgttccgc
tgggtgaaggacggccggacgttcgagtcagaacggacggaaagtggaaccctggaggtc
aatgaggacgaagaattggaattttaccagggaacgttccgatgctacgcctccaacatg
cttgggaccgccatgacacagacggtgcacatcaatgtggaggcccagccagtcgtgcag
aagcaaaagaagttccggcggcaagcatacgtgggggaaagcatggtcctgtcctgtaca
cctccatcgagctccagcccgccagtcatccactggatggacaagaagatggtgcacata
aggcagagtgacagagtgacggtcggcctcaacggcaacttgtacttcgctaatctgctc
aagagtgatagccgactggattatatctgcaacgcccagtacacggcagccaggaccatc
ttgcctgacactgccattgccctaattgtgctgcccagtaatgacgttgttcacggaaag
ccacctcacatcttccacccaagtggttcacactcatcagtcttggcgctccgtggccaa
actcttaccttggaatgcattcccaaaggcctccccactcccaaagtggagtggaagaag
aaggacggaaacctggacgaaaccagcgctcatccggaaaactacaaccgctggctctat
ttcgacagcatcagtcagagcgacgacggcgagtacgagtgtcgagcgttcaatacccac
ggctccagtgtgcactcctacactgtcacggtggaagctgctccctactgggtgaaggaa
ccccagaacttgcgttacgctcctggcgaaaccgtgcgattggactgtctggcggaaggc
atcccgacccccaacgtgacctggagcatcaacgggcagccgctctcaacagtggacaag
gacactcgccgcagcgtgtcgggcggggtgctgaagttgaaggacgtcctgctgagcgac
acggcggtgtaccagtgcgaggccgccaacaaacatggctccatcctcatcaacgcctac
ctccacgtcgtcgagctaccccctcagatcctgtctgcagacggtgtcgtataccgagtc
acagagggcgggaccgtcaagatgtcctgcgaaaccttcggctcaccgctccctcatgtc
aaatgggactgggaggactggaccccactgctgtcggaccctcgtgtcttcctgttgacg
aatgggacgctggagttgtccgacgtgggccacagcgacagcggcacttacacttgcgtg
atcaaaaacactaacatctccatcaatgcccacttagaagtattcaacaagacgacgatt
gagacggccccgcagaacgtccgagcgctgcgaggtgggagcgccgtgctggattgtcat
gtccgcaaagacccccgattgcttcgccaccagattatctggaggaaggacgggcaaaaa
ctggacgaatcatcgccggatgacaagtacacagtctttgaaaacggcacattgaaggtg
actgacatccaatcacaagacaatgcggcgtattcgtgcgaggtgatcacagaactggac
caggtgactgcaggcggttctgtcacagtcgtggctcgtccggacccccctcaggatgtg
agtctgactgatgtgaaagacgacactttgactctgagctggatcccgggtcgctcgcac
aacagccccatcacagagttcatagtggaggccaaggaggagcagcactcacgtaggcac
gacggcgacacctggaggtggcaggtgctgaagcgggtgtccgccgactttaaccacctg
cagctcagcctccggcctttctgcacctacgccttccgtgtcgtcgccgtcaaccagctt
ggcctcagcgatcccagccggtccaccgccctccacagcacgcctccggcagtaccacac
agcaaccccaccggtgttcgcagtgaatcctccgacgcgggaacacttgctatcacatgg
gacgagatgcccaggcgattacataatggccaggacttccagtacaaggtgttgtggagg
aaggcgggggacaagagcgaccgctggaaccacgactacaccaagtctccgcctttcttg
gtcaataataccggaacgtacgagccatttgagataaaagttcaagctgtcaacacactg
ggagaaggacctgctccagaggcccagattggacactcaggcgaggatgtccccgaggag
tctcctagcggagtggaagtccacgttatgaacagcacaattgccgtgagctggaatgaa
gcccagaaggtccgtggtcgtcttctgggctacaagatctacatcaggagactgggccca
gaaaacggacgagtccggcgatcccctggagaattgcgtcatctgcaggagggaaaggag
cgcgagggaagatcagagcgaggaaagggagacgacaaggtggttgtggtccaaggcatg
aagactgcaacagaagtaacgggtctgcagctcttctctcgctacaccgtttgtgtcact
gcctttaacagcaaaggagagagccccgcctccctgcctgtcaacttcagcaccccggaa
ggagtgcctggcccaccatcgtcacttgtttttgagagcccctctgagaactctatgctt
ctctactggagcccaccacttcagaccaacggaattctcctgggatacatggtgcagtac
caacgagaggtgaagagcagggacagtccagtgcagatagagctcatccctgatcccagt
gtgacccacctcatgctggactctctggacccccacagctactacaccttccaggtgatc
gctcgcaccgctgctggggatggacagccaatcaccaggaggaatgccaccctttttgat
ggagttcctccaagaaacattactgtcatgcctgataagacatcgctcaacctgagctgg
gtgcctggagagcgagagaggaaccatgggttccatattgatttccttaagaaaagtgct
gggggtcagtggaaggtgtcagaaatgctgaactcctcgcagggtttctactcactgacg
ggtcttcagccaggaactgagtaccaccttgttgtcatgcatgggaactacactcagtgg
gaagctgcaaaatggaccttaggaccaggaccatcggaggtgagcggtggcttcgccaat
cagggctggctgatcgggctcattagtgccattgtcctgcttatcctgatccttcttatc
ttgtgtctggtcaagcggagaaagggtggcaaatatgcagtcaaagacaaggaagagaag
gaggtggactcggaagccaagcccatgaaggacgaaaccttcggagagtacagtgacacg
gatgaaaagcgtacagaaagccagccgtcgctttgcggcgacagcaagctgggcagcgac
gactcgctggccgagtacggcgacagcgtggacatccagttcaacgaggacggctccttc
attggtcagtatagcggaagggcaaccgcccccgccgggaacgagagctccggccctacc
tcgccggacaacacggccccacccccccccattgcgccgtccatgtcgagcattctcaac
cgacctaactaa
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