Syngnathoides biaculeatus (alligator pipefish): 133504677
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Entry
133504677 CDS
T09681
Symbol
dhx34
Name
(RefSeq) probable ATP-dependent RNA helicase DHX34 isoform X1
KO
K20101
ATP-dependent RNA helicase DHX34 [EC:
5.6.2.6
]
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sbia03019
]
133504677 (dhx34)
Enzymes [BR:
sbia01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
133504677 (dhx34)
Messenger RNA biogenesis [BR:
sbia03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
133504677 (dhx34)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
zf-C2H2_DHX34
Helicase_C
HA2_C
DEAD
AAA_22
HA2_N
AAA_19
ResIII
AAA_23
AAA_16
Motif
Other DBs
NCBI-GeneID:
133504677
NCBI-ProteinID:
XP_061683168
LinkDB
All DBs
Position
8:9993335..10019209
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AA seq
1135 aa
AA seq
DB search
MDVDGRSRSRVWDWESPYCRGQLDEIFFRPNDYIQAGTQEHKDFWAFFDRFQSFKLKKDM
CGSGPSLDDGRDVVQTGSLDLPKEYDPRYRINVSLVSRDIEERLGRSHTNQSRRDSSGPS
GHVISDFRLSLLHYLDFSQRQSFGKLAKLQREQKNLPIFQYRDRIVDLVRRHPVVVVAGD
TGCGKSTQVPQYLLWAGFSHIACTQPRRIACISLAKRVSFESLNQYGSKVGYQIRFETTR
TTATKLIFLTEGLLLRQIQQDKMLEQYQVLIVDEVHERHLHGDFLLGVLRSLVADRPDDL
RLILMSATINIKLFSDYFGGAPVLQVPGRLFPIQVIYQPIPPEEQAASRTEKLEPRPYLR
ILQTIDQRYPPEERGDLLIFLSGVAEISAIQEACQVYATHTRRWIVLPLHSTLSLAQQDK
VFDIAPAGVRKCIISTNIAETSVTIDGVRFVVDSGKVKEMSFDPKAKMQRLQEFWISRAS
SEQRKGRAGRTGPGVCYRLYAESDYDAFASYPVPEIHRVALDSLVLQMKSMGLGDPLKFV
FIDPPPAASIQTAITYLKEQGALDHRCELTTIGNVLSQLPVDVVIGKMLVLGSLFNLVEP
VLTVAAALSVQSPFLRSSQHNPDCATARQPLHCNQGDPFTLLNTFNAWVEVKGERGGGSR
KWCRRRGLEEQRLYEMVNLRRQFKELLKSHGLLEAEANDNDHSDRQQRRERLTERRKLHQ
LKRDHEQQEGTKRKVLRMEEGQEGEFSSGSDAEELGRGRSRKKDKDRANVDIQEVKFKLR
HNVSELQDAVNISQDLSSRQQALLKLLLCRGLYPQLALPDEHNGTRKDTEQVFHTKNKQG
IVIHPTSVFASDPEVLHVRNDAQDTGRDSSKHQLLAFVTLLETNRPYLSNCVRVPALQAL
LLVANSLDSNADCSRLVVDGWLELQVKVPEEALRALSTALSLRAEWERLLQAQLGLSPTA
EVSQKSMQKLSERLVRFLLYTEINYSLQRLSALNTQNLYIGPQAASELSLGVGLTQLFPS
AEAKPDPVKGGLRVTNFFTYNCLTDSRDLYSDCLRTFWNCPNCDLYMPLTPLERMQHETT
CRPAGEQSVQDEGADVVKPRSSSSLCRVYHCDICDQDLTLTSTEILKHKRQHMYS
NT seq
3408 nt
NT seq
+upstream
nt +downstream
nt
atggatgtagacgggaggtcccgcagtcgggtgtgggattgggaaagtccttattgccgg
ggccagctggacgaaatctttttccgtccaaacgattacatccaagccggcacgcaagaa
cacaaagacttctgggcgtttttcgaccgcttccagagcttcaagctaaagaaggatatg
tgtggatccggtcccagccttgatgatggtagagacgtagttcaaaccgggtctttggac
cttcctaaggagtatgacccccgataccggatcaacgtgtctctggtatccagagacatc
gaagaacgtctcgggcgatcacacacgaaccaaagcagacgcgactcttcgggtccgagc
ggtcatgtgatctcggactttcgtctgtccttgttgcactacctggacttcagccagcgg
cagagcttcggcaagctggccaagctgcagcgcgagcagaagaacctgcccatcttccag
taccgagaccgcatcgtggacctggtcaggcgccacccggtggtcgtggtggcgggagac
accggctgtggcaagtccactcaggtgccccagtatctcctctgggccgggttctcccac
atagcatgcacccaaccccgacgcattgcctgcatttccttggccaagagggtcagcttc
gaaagtctcaaccagtatggctcaaaggtgggctaccagatccgcttcgaaactacacgc
actactgccactaagctgatcttcctaacagaaggtctgctgctgaggcagatccagcag
gacaaaatgctggagcagtatcaagtgctgatcgtggacgaggtacacgagcgccacctg
cacggtgacttcctgctaggcgtgctgcgctcgttggtggctgatcgaccagacgacttg
cggctcattctcatgtcggccaccatcaacatcaagctcttctccgactactttggtggc
gctcccgtgctgcaggtgcctgggagactcttccccatccaggtgatctatcagcctatt
ccccctgaagagcaggcagcgtcccgtacagagaaactggagccccgaccgtacctgcgc
atcctacagaccatcgaccagcgctacccgccagaggagcgaggcgacctgcttatcttc
ctgagtggcgtagccgagatcagcgccatccaagaggcgtgtcaggtgtacgccacgcac
acgcgccgttggatcgtgttgccactgcacagcacgctctcgctggctcagcaggacaag
gtgtttgacatagcgcctgctggtgtgagaaagtgcatcatctccaccaacatcgcagag
acctcagtcaccattgacggcgtgcgttttgttgtcgactcaggcaaggtgaaagagatg
agttttgacccaaaggccaagatgcagcgtcttcaggagttctggatcagcagagccagc
tcggagcagaggaagggccgtgctggtcgcacgggtcccggtgtgtgttaccgcctctac
gctgagtcagactatgacgccttcgcttcctaccctgtccctgaaattcaccgggtggcg
ctggactccctggttcttcagatgaagagcatgggactcggcgatccacttaagtttgtc
ttcatcgaccctccgccggccgccagcatccagaccgctattacctatctcaaggagcag
ggggcgctggaccaccgatgcgagctgaccaccatcgggaatgtgctatcccagctccct
gttgacgtcgtaattggcaagatgctggtcctgggctccttgttcaacctggtggagcct
gtgctgacggtagctgctgctctcagcgttcagtcgccgttcctgcgcagctcgcagcac
aatcccgactgcgccaccgcccgccaaccgttgcattgcaaccagggagacccctttaca
ctgcttaacaccttcaacgcctgggtggaagtgaagggcgagagaggtggcggttccagg
aagtggtgtcgtcggcgaggcctagaggagcagcgactttacgagatggtaaacctgcgc
agacaattcaaggagctactgaagagccacggcttgctggaggcggaagccaatgacaac
gaccacagcgaccggcagcagcggcgtgaacgtctgacggaaaggaggaagcttcatcag
ctgaagagagatcatgagcagcaggagggcaccaaacgcaaagtcctcaggatggaagaa
ggccaggaaggggagttctcctccggatccgatgcagaggaactgggacgaggaaggagc
aggaagaaggacaaggacagagccaatgtggacattcaggaagtgaagttcaagcttcgc
cacaacgtgtcagagctgcaggacgctgtcaacatcagtcaggatttgtcgtcccgccag
caagctcttctcaagcttcttctctgccgtggtctctaccctcagctggctctgcccgat
gagcacaacggcacccgcaaggataccgagcaggtgttccatacgaaaaataagcagggg
atcgtgattcatcccacaagtgtctttgccagcgatcctgaggtattacatgtgaggaac
gatgcccaagatacgggacgagacagcagcaagcatcagctgcttgccttcgtcaccttg
ctggagaccaacaggccatatttgtccaactgtgtccgtgttcctgcactgcaggctctg
ttgctggtggccaactcactggacagcaatgccgattgctcccgtctggtcgtggatggc
tggctggaacttcaagtgaaggtgcccgaggaggctctcagggcactgtccacagcactc
agccttcgggccgagtgggagcgcctcctgcaagcccagctggggctgagtcccactgcc
gaggtctctcagaagtccatgcagaagctaagtgagcgccttgtccgctttctgctttat
actgagatcaactacagtctgcagcgtctctccgctctcaacactcagaacctgtacatc
ggacctcaggccgcgtcagaactttccctcggtgtcggtctcacgcagctgtttccgagc
gctgaggccaagccggaccccgtcaagggaggcctgcgcgtcactaactttttcacgtac
aactgtctgaccgattccagggacctgtatagcgattgcctgcgtacattctggaactgt
cccaactgtgacctctacatgcctctgacccctttggagcgaatgcagcatgagactacc
tgcaggccagcaggagaacagtcagtgcaggatgaaggggcagatgtcgtcaagccgcgc
tcgtcctccagtctgtgccgagtctaccactgtgacatttgtgaccaagacttgacgctc
acatcaacggagatcctcaagcacaaaaggcagcatatgtactcttaa
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